data_YG9
# 
_chem_comp.id                                    YG9 
_chem_comp.name                                  "(5R)-5-[2-(4-methoxyphenyl)ethyl]-5-methylimidazolidine-2,4-dione" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H16 N2 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-28 
_chem_comp.pdbx_modified_date                    2023-02-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        248.278 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YG9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7FSG 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YG9 C10  C1  C 0 1 N N N -7.292 -10.336 -8.519  -2.435 -1.461 1.561  C10  YG9 1  
YG9 C15  C2  C 0 1 N N N -5.014 -11.510 -8.661  -3.203 -0.974 -0.772 C15  YG9 2  
YG9 C17  C3  C 0 1 Y N N -4.014 -8.167  -13.086 1.904  1.374  0.035  C17  YG9 3  
YG9 C01  C4  C 0 1 N N N -3.616 -4.109  -14.420 6.180  -0.688 -0.468 C01  YG9 4  
YG9 C03  C5  C 0 1 Y N N -3.213 -5.888  -12.863 4.069  0.380  -0.238 C03  YG9 5  
YG9 C04  C6  C 0 1 Y N N -3.152 -6.058  -11.494 3.600  -0.794 0.333  C04  YG9 6  
YG9 C05  C7  C 0 1 Y N N -3.528 -7.277  -10.927 2.288  -0.878 0.758  C05  YG9 7  
YG9 C06  C8  C 0 1 Y N N -3.948 -8.330  -11.726 1.440  0.203  0.604  C06  YG9 8  
YG9 C07  C9  C 0 1 N N N -4.404 -9.644  -11.107 0.006  0.104  1.057  C07  YG9 9  
YG9 C08  C10 C 0 1 N N N -5.484 -9.409  -10.031 -0.859 -0.413 -0.094 C08  YG9 10 
YG9 C09  C11 C 0 1 N N R -6.053 -10.684 -9.413  -2.314 -0.513 0.366  C09  YG9 11 
YG9 C12  C12 C 0 1 N N N -5.929 -12.824 -10.408 -3.877 1.044  -0.132 C12  YG9 12 
YG9 C18  C13 C 0 1 Y N N -3.626 -6.963  -13.645 3.217  1.465  -0.387 C18  YG9 13 
YG9 N11  N1  N 0 1 N N N -6.562 -11.504 -10.472 -2.847 0.818  0.704  N11  YG9 14 
YG9 N14  N2  N 0 1 N N N -4.986 -12.824 -9.268  -4.083 0.026  -0.975 N14  YG9 15 
YG9 O02  O1  O 0 1 N N N -2.819 -4.673  -13.424 5.360  0.468  -0.652 O02  YG9 16 
YG9 O13  O2  O 0 1 N N N -6.178 -13.724 -11.142 -4.544 2.059  -0.122 O13  YG9 17 
YG9 O16  O3  O 0 1 N N N -4.364 -11.200 -7.717  -3.133 -2.022 -1.378 O16  YG9 18 
YG9 H102 H1  H 0 0 N N N -7.697 -11.259 -8.077  -1.829 -1.086 2.385  H102 YG9 19 
YG9 H101 H2  H 0 0 N N N -6.984 -9.650  -7.716  -3.478 -1.520 1.874  H101 YG9 20 
YG9 H103 H3  H 0 0 N N N -8.065 -9.855  -9.136  -2.086 -2.453 1.275  H103 YG9 21 
YG9 H171 H4  H 0 0 N N N -4.366 -8.972  -13.715 1.240  2.217  -0.084 H171 YG9 22 
YG9 H012 H5  H 0 0 N N N -3.170 -3.161  -14.754 6.228  -0.935 0.593  H012 YG9 23 
YG9 H011 H6  H 0 0 N N N -3.684 -4.802  -15.271 5.753  -1.528 -1.017 H011 YG9 24 
YG9 H013 H7  H 0 0 N N N -4.623 -3.920  -14.020 7.184  -0.484 -0.840 H013 YG9 25 
YG9 H041 H8  H 0 0 N N N -2.814 -5.249  -10.863 4.261  -1.640 0.450  H041 YG9 26 
YG9 H051 H9  H 0 0 N N N -3.491 -7.401  -9.855  1.923  -1.791 1.204  H051 YG9 27 
YG9 H072 H10 H 0 0 N N N -3.539 -10.142 -10.644 -0.062 -0.584 1.900  H072 YG9 28 
YG9 H071 H11 H 0 0 N N N -4.819 -10.288 -11.897 -0.347 1.089  1.363  H071 YG9 29 
YG9 H082 H12 H 0 0 N N N -5.040 -8.806  -9.225  -0.791 0.275  -0.937 H082 YG9 30 
YG9 H081 H13 H 0 0 N N N -6.313 -8.852  -10.492 -0.506 -1.398 -0.400 H081 YG9 31 
YG9 H181 H14 H 0 0 N N N -3.644 -6.854  -14.719 3.579  2.380  -0.832 H181 YG9 32 
YG9 H111 H15 H 0 0 N N N -7.242 -11.220 -11.148 -2.520 1.415  1.395  H111 YG9 33 
YG9 H141 H16 H 0 0 N N N -4.427 -13.597 -8.969  -4.781 0.010  -1.649 H141 YG9 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YG9 O02 C01  SING N N 1  
YG9 C03 O02  SING N N 2  
YG9 C04 C03  DOUB Y N 3  
YG9 C05 C04  SING Y N 4  
YG9 C06 C05  DOUB Y N 5  
YG9 C08 C07  SING N N 6  
YG9 C09 C08  SING N N 7  
YG9 C10 C09  SING N N 8  
YG9 N11 C09  SING N N 9  
YG9 C12 N11  SING N N 10 
YG9 O13 C12  DOUB N N 11 
YG9 N14 C12  SING N N 12 
YG9 C15 N14  SING N N 13 
YG9 O16 C15  DOUB N N 14 
YG9 C07 C06  SING N N 15 
YG9 C17 C06  SING Y N 16 
YG9 C18 C17  DOUB Y N 17 
YG9 C03 C18  SING Y N 18 
YG9 C09 C15  SING N N 19 
YG9 C10 H102 SING N N 20 
YG9 C10 H101 SING N N 21 
YG9 C10 H103 SING N N 22 
YG9 C17 H171 SING N N 23 
YG9 C01 H012 SING N N 24 
YG9 C01 H011 SING N N 25 
YG9 C01 H013 SING N N 26 
YG9 C04 H041 SING N N 27 
YG9 C05 H051 SING N N 28 
YG9 C07 H072 SING N N 29 
YG9 C07 H071 SING N N 30 
YG9 C08 H082 SING N N 31 
YG9 C08 H081 SING N N 32 
YG9 C18 H181 SING N N 33 
YG9 N11 H111 SING N N 34 
YG9 N14 H141 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YG9 SMILES           ACDLabs              12.01 "COc1ccc(cc1)CCC1(C)NC(=O)NC1=O"                                                                                       
YG9 InChI            InChI                1.06  "InChI=1S/C13H16N2O3/c1-13(11(16)14-12(17)15-13)8-7-9-3-5-10(18-2)6-4-9/h3-6H,7-8H2,1-2H3,(H2,14,15,16,17)/t13-/m1/s1" 
YG9 InChIKey         InChI                1.06  HYRDVXQOZUFAFW-CYBMUJFWSA-N                                                                                            
YG9 SMILES_CANONICAL CACTVS               3.385 "COc1ccc(CC[C@@]2(C)NC(=O)NC2=O)cc1"                                                                                   
YG9 SMILES           CACTVS               3.385 "COc1ccc(CC[C]2(C)NC(=O)NC2=O)cc1"                                                                                     
YG9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@]1(C(=O)NC(=O)N1)CCc2ccc(cc2)OC"                                                                                  
YG9 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C(=O)NC(=O)N1)CCc2ccc(cc2)OC"                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
YG9 "SYSTEMATIC NAME" ACDLabs              12.01 "(5R)-5-[2-(4-methoxyphenyl)ethyl]-5-methylimidazolidine-2,4-dione"     
YG9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{R})-5-[2-(4-methoxyphenyl)ethyl]-5-methyl-imidazolidine-2,4-dione" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YG9 "Create component" 2023-01-28 RCSB 
YG9 "Initial release"  2023-02-15 RCSB 
# 
