data_Y39
# 
_chem_comp.id                                    Y39 
_chem_comp.name                                  "(1S,2S)-2-nonylcyclopropanecarboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H24 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-05-02 
_chem_comp.pdbx_modified_date                    2014-11-14 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        212.328 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y39 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4PG0 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y39 OAB O1  O 0 1 N N N 5.830  -22.434 13.375 -6.693 0.017  0.746  OAB Y39 1  
Y39 CAM C1  C 0 1 N N N 5.430  -22.060 12.268 -5.502 0.394  0.256  CAM Y39 2  
Y39 OAC O2  O 0 1 N N N 6.127  -21.560 11.379 -5.348 1.519  -0.159 OAC Y39 3  
Y39 CAO C2  C 0 1 N N S 3.956  -22.286 11.940 -4.356 -0.584 0.222  CAO Y39 4  
Y39 CAL C3  C 0 1 N N N 3.557  -23.702 12.132 -3.885 -1.073 -1.149 CAL Y39 5  
Y39 CAN C4  C 0 1 N N R 2.998  -22.651 13.071 -3.024 -0.093 -0.349 CAN Y39 6  
Y39 CAK C5  C 0 1 N N N 1.547  -22.276 12.742 -1.742 -0.635 0.286  CAK Y39 7  
Y39 CAJ C6  C 0 1 N N N 0.582  -22.666 13.859 -0.531 0.065  -0.335 CAJ Y39 8  
Y39 CAI C7  C 0 1 N N N -0.831 -22.229 13.444 0.752  -0.477 0.299  CAI Y39 9  
Y39 CAH C8  C 0 1 N N N -1.652 -21.827 14.669 1.962  0.223  -0.322 CAH Y39 10 
Y39 CAG C9  C 0 1 N N N -3.022 -21.310 14.214 3.245  -0.319 0.312  CAG Y39 11 
Y39 CAF C10 C 0 1 N N N -4.128 -21.819 15.138 4.456  0.381  -0.309 CAF Y39 12 
Y39 CAE C11 C 0 1 N N N -4.485 -20.742 16.168 5.739  -0.161 0.326  CAE Y39 13 
Y39 CAD C12 C 0 1 N N N -5.378 -19.704 15.499 6.949  0.539  -0.295 CAD Y39 14 
Y39 CAA C13 C 0 1 N N N -6.406 -19.187 16.499 8.232  -0.002 0.339  CAA Y39 15 
Y39 H1  H1  H 0 1 N N N 6.765  -22.279 13.444 -7.398 0.679  0.747  H1  Y39 16 
Y39 H2  H2  H 0 1 N N N 3.540  -21.740 11.081 -4.319 -1.293 1.049  H2  Y39 17 
Y39 H3  H3  H 0 1 N N N 2.896  -24.188 11.399 -3.537 -2.103 -1.224 H3  Y39 18 
Y39 H4  H4  H 0 1 N N N 4.292  -24.432 12.503 -4.403 -0.686 -2.027 H4  Y39 19 
Y39 H5  H5  H 0 1 N N N 3.345  -22.607 14.114 -2.977 0.938  -0.699 H5  Y39 20 
Y39 H6  H6  H 0 1 N N N 1.489  -21.188 12.587 -1.759 -0.446 1.359  H6  Y39 21 
Y39 H7  H7  H 0 1 N N N 1.248  -22.794 11.819 -1.673 -1.708 0.106  H7  Y39 22 
Y39 H8  H8  H 0 1 N N N 0.606  -23.755 14.009 -0.513 -0.124 -1.409 H8  Y39 23 
Y39 H9  H9  H 0 1 N N N 0.869  -22.161 14.793 -0.600 1.138  -0.156 H9  Y39 24 
Y39 H10 H10 H 0 1 N N N -0.758 -21.370 12.760 0.734  -0.288 1.372  H10 Y39 25 
Y39 H11 H11 H 0 1 N N N -1.332 -23.064 12.932 0.821  -1.550 0.120  H11 Y39 26 
Y39 H12 H12 H 0 1 N N N -1.788 -22.701 15.323 1.980  0.034  -1.395 H12 Y39 27 
Y39 H13 H13 H 0 1 N N N -1.125 -21.035 15.221 1.893  1.296  -0.143 H13 Y39 28 
Y39 H14 H14 H 0 1 N N N -3.016 -20.210 14.230 3.227  -0.130 1.386  H14 Y39 29 
Y39 H15 H15 H 0 1 N N N -3.218 -21.660 13.190 3.314  -1.392 0.133  H15 Y39 30 
Y39 H16 H16 H 0 1 N N N -5.019 -22.062 14.541 4.474  0.192  -1.382 H16 Y39 31 
Y39 H17 H17 H 0 1 N N N -3.780 -22.722 15.661 4.387  1.454  -0.129 H17 Y39 32 
Y39 H18 H18 H 0 1 N N N -5.019 -21.201 17.013 5.721  0.028  1.399  H18 Y39 33 
Y39 H19 H19 H 0 1 N N N -3.566 -20.260 16.533 5.808  -1.234 0.146  H19 Y39 34 
Y39 H20 H20 H 0 1 N N N -4.761 -18.866 15.143 6.967  0.351  -1.369 H20 Y39 35 
Y39 H21 H21 H 0 1 N N N -5.898 -20.165 14.646 6.880  1.612  -0.116 H21 Y39 36 
Y39 H22 H22 H 0 1 N N N -7.048 -18.438 16.012 9.095  0.496  -0.103 H22 Y39 37 
Y39 H23 H23 H 0 1 N N N -7.024 -20.024 16.855 8.214  0.186  1.412  H23 Y39 38 
Y39 H24 H24 H 0 1 N N N -5.887 -18.726 17.352 8.301  -1.075 0.160  H24 Y39 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y39 OAC CAM DOUB N N 1  
Y39 CAO CAL SING N N 2  
Y39 CAO CAM SING N N 3  
Y39 CAO CAN SING N N 4  
Y39 CAL CAN SING N N 5  
Y39 CAM OAB SING N N 6  
Y39 CAK CAN SING N N 7  
Y39 CAK CAJ SING N N 8  
Y39 CAI CAJ SING N N 9  
Y39 CAI CAH SING N N 10 
Y39 CAG CAH SING N N 11 
Y39 CAG CAF SING N N 12 
Y39 CAF CAE SING N N 13 
Y39 CAD CAE SING N N 14 
Y39 CAD CAA SING N N 15 
Y39 OAB H1  SING N N 16 
Y39 CAO H2  SING N N 17 
Y39 CAL H3  SING N N 18 
Y39 CAL H4  SING N N 19 
Y39 CAN H5  SING N N 20 
Y39 CAK H6  SING N N 21 
Y39 CAK H7  SING N N 22 
Y39 CAJ H8  SING N N 23 
Y39 CAJ H9  SING N N 24 
Y39 CAI H10 SING N N 25 
Y39 CAI H11 SING N N 26 
Y39 CAH H12 SING N N 27 
Y39 CAH H13 SING N N 28 
Y39 CAG H14 SING N N 29 
Y39 CAG H15 SING N N 30 
Y39 CAF H16 SING N N 31 
Y39 CAF H17 SING N N 32 
Y39 CAE H18 SING N N 33 
Y39 CAE H19 SING N N 34 
Y39 CAD H20 SING N N 35 
Y39 CAD H21 SING N N 36 
Y39 CAA H22 SING N N 37 
Y39 CAA H23 SING N N 38 
Y39 CAA H24 SING N N 39 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y39 SMILES           ACDLabs              12.01 "O=C(O)C1CC1CCCCCCCCC"                                                                                  
Y39 InChI            InChI                1.03  "InChI=1S/C13H24O2/c1-2-3-4-5-6-7-8-9-11-10-12(11)13(14)15/h11-12H,2-10H2,1H3,(H,14,15)/t11-,12-/m0/s1" 
Y39 InChIKey         InChI                1.03  GVGYASDUOPEXET-RYUDHWBXSA-N                                                                             
Y39 SMILES_CANONICAL CACTVS               3.385 "CCCCCCCCC[C@H]1C[C@@H]1C(O)=O"                                                                         
Y39 SMILES           CACTVS               3.385 "CCCCCCCCC[CH]1C[CH]1C(O)=O"                                                                            
Y39 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "CCCCCCCCC[C@H]1C[C@@H]1C(=O)O"                                                                         
Y39 SMILES           "OpenEye OEToolkits" 1.9.2 "CCCCCCCCCC1CC1C(=O)O"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y39 "SYSTEMATIC NAME" ACDLabs              12.01 "(1S,2S)-2-nonylcyclopropanecarboxylic acid"    
Y39 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "(1S,2S)-2-nonylcyclopropane-1-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y39 "Create component"  2014-05-02 RCSB 
Y39 "Modify descriptor" 2014-09-05 RCSB 
Y39 "Initial release"   2014-11-19 RCSB 
# 
