data_XW9
# 
_chem_comp.id                                    XW9 
_chem_comp.name                                  "[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrol-2(1H)-yl](3-hydroxy-4,7-dihydro[1,2]oxazolo[5,4-c]pyridin-6(5H)-yl)methanone" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H33 N5 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-08 
_chem_comp.pdbx_modified_date                    2024-12-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        535.592 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XW9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7G2O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XW9 C11 C1  C 0 1 N N N N N N -14.356 9.947  49.726 0.395   0.564  -0.083 C11 XW9 1  
XW9 C15 C2  C 0 1 Y N N N N N -13.028 7.061  46.008 3.024   0.978  0.099  C15 XW9 2  
XW9 C16 C3  C 0 1 Y N N N N N -12.295 6.792  44.876 4.341   0.539  0.050  C16 XW9 3  
XW9 C18 C4  C 0 1 N N N N N N -11.378 5.200  43.405 5.977   -1.177 -0.093 C18 XW9 4  
XW9 C19 C5  C 0 1 N N N N N N -11.260 3.691  43.289 6.073   -2.700 -0.201 C19 XW9 5  
XW9 C20 C6  C 0 1 N N N N N N -10.626 3.389  41.905 7.538   -3.111 -0.376 C20 XW9 6  
XW9 C21 C7  C 0 1 N N N N N N -10.489 1.863  41.813 7.632   -4.638 -0.405 C21 XW9 7  
XW9 C23 C8  C 0 1 N N N N N N -10.084 1.659  44.134 5.695   -4.860 0.992  C23 XW9 8  
XW9 C24 C9  C 0 1 N N N N N N -10.323 3.150  44.371 5.523   -3.341 1.077  C24 XW9 9  
XW9 C26 C10 C 0 1 Y N N N N N -11.914 9.047  44.456 5.141   2.701  0.191  C26 XW9 10 
XW9 C27 C11 C 0 1 N N N N N N -11.261 10.006 43.542 6.324   3.634  0.236  C27 XW9 11 
XW9 C28 C12 C 0 1 N N N N N N -10.039 9.556  42.715 6.793   4.244  -1.087 C28 XW9 12 
XW9 N1  N1  N 0 1 N N N N N N -9.881  12.810 52.901 -5.492  -1.204 -0.947 N1  XW9 13 
XW9 C2  C13 C 0 1 N N N N N N -11.233 12.539 52.767 -4.258  -1.697 -0.722 C2  XW9 14 
XW9 O3  O1  O 0 1 N N N N N N -11.911 12.622 53.771 -4.082  -2.899 -0.680 O3  XW9 15 
XW9 N4  N2  N 0 1 N N N N N N -11.788 12.159 51.528 -3.220  -0.857 -0.542 N4  XW9 16 
XW9 C5  C14 C 0 1 N N N N N N -13.256 11.765 51.498 -1.798  -1.209 -0.461 C5  XW9 17 
XW9 C6  C15 C 0 1 N N N N N N -13.318 10.792 50.374 -1.028  0.078  -0.256 C6  XW9 18 
XW9 C7  C16 C 0 1 N N N N N N -12.118 10.625 49.824 -1.850  1.086  -0.214 C7  XW9 19 
XW9 C8  C17 C 0 1 N N N N N N -11.028 11.430 50.457 -3.273  0.601  -0.387 C8  XW9 20 
XW9 C9  C18 C 0 1 N N N N N N -12.150 9.678  48.716 -1.081  2.373  -0.009 C9  XW9 21 
XW9 N10 N3  N 0 1 N N N N N N -13.628 9.605  48.488 0.345   2.022  0.069  N10 XW9 22 
XW9 C12 C19 C 0 1 N N N N N N -14.094 8.829  47.452 1.383   2.862  0.248  C12 XW9 23 
XW9 O13 O2  O 0 1 N N N N N N -15.274 8.471  47.449 1.181   4.043  0.454  O13 XW9 24 
XW9 C14 C20 C 0 1 Y N N N N N -13.209 8.402  46.334 2.771   2.347  0.193  C14 XW9 25 
XW9 O17 O3  O 0 1 N N N N N N -12.091 5.471  44.599 4.603   -0.788 -0.047 O17 XW9 26 
XW9 O22 O4  O 0 1 N N N N N N -9.603  1.386  42.835 7.077   -5.171 0.799  O22 XW9 27 
XW9 N25 N4  N 0 1 Y N N N N N -11.750 7.749  44.097 5.342   1.401  0.097  N25 XW9 28 
XW9 C29 C21 C 0 1 N N N N N N -11.371 9.878  42.042 6.068   5.114  -0.057 C29 XW9 29 
XW9 C30 C22 C 0 1 Y N N N N N -12.633 9.432  45.561 3.864   3.221  0.234  C30 XW9 30 
XW9 C31 C23 C 0 1 N N N N N N -9.168  12.784 54.218 -5.758  0.242  -0.836 C31 XW9 31 
XW9 C32 C24 C 0 1 Y N N N N N -7.713  12.507 53.957 -7.048  0.401  -0.073 C32 XW9 32 
XW9 C33 C25 C 0 1 Y N N N N N -7.089  12.643 52.727 -7.885  -0.627 0.201  C33 XW9 33 
XW9 C34 C26 C 0 1 N N N N N N -7.821  13.012 51.473 -7.665  -2.056 -0.199 C34 XW9 34 
XW9 C35 C27 C 0 1 N N N N N N -9.185  13.670 51.872 -6.602  -2.096 -1.314 C35 XW9 35 
XW9 C36 C28 C 0 1 Y N N N N N -5.697  12.322 53.052 -8.945  -0.036 0.914  C36 XW9 36 
XW9 N37 N5  N 0 1 Y N N N N N -5.569  11.999 54.381 -8.653  1.240  0.998  N37 XW9 37 
XW9 O38 O5  O 0 1 Y N N N N N -6.800  12.118 54.918 -7.598  1.493  0.453  O38 XW9 38 
XW9 O39 O6  O 0 1 N N N N N N -4.716  12.377 52.142 -10.044 -0.658 1.411  O39 XW9 39 
XW9 H46 H1  H 0 1 N N N N N N -14.596 9.056  50.324 0.835   0.112  0.805  H46 XW9 40 
XW9 H47 H2  H 0 1 N N N N N N -15.278 10.510 49.521 0.984   0.303  -0.962 H47 XW9 41 
XW9 H48 H3  H 0 1 N N N N N N -13.443 6.270  46.615 2.209   0.271  0.060  H48 XW9 42 
XW9 H50 H4  H 0 1 N N N N N N -11.924 5.604  42.540 6.479   -0.846 0.816  H50 XW9 43 
XW9 H49 H5  H 0 1 N N N N N N -10.377 5.654  43.452 6.455   -0.720 -0.959 H49 XW9 44 
XW9 H51 H6  H 0 1 N N N N N N -12.250 3.217  43.365 5.494   -3.042 -1.060 H51 XW9 45 
XW9 H53 H7  H 0 1 N N N N N N -11.276 3.762  41.100 7.921   -2.704 -1.312 H53 XW9 46 
XW9 H52 H8  H 0 1 N N N N N N -9.637  3.865  41.828 8.126   -2.725 0.457  H52 XW9 47 
XW9 H54 H9  H 0 1 N N N N N N -11.478 1.400  41.944 7.078   -5.021 -1.262 H54 XW9 48 
XW9 H55 H10 H 0 1 N N N N N N -10.085 1.593  40.826 8.678   -4.936 -0.486 H55 XW9 49 
XW9 H57 H11 H 0 1 N N N N N N -11.034 1.123  44.278 5.345   -5.318 1.917  H57 XW9 50 
XW9 H56 H12 H 0 1 N N N N N N -9.345  1.300  44.866 5.115   -5.245 0.154  H56 XW9 51 
XW9 H59 H13 H 0 1 N N N N N N -9.364  3.687  44.328 6.070   -2.960 1.939  H59 XW9 52 
XW9 H58 H14 H 0 1 N N N N N N -10.781 3.296  45.360 4.465   -3.099 1.180  H58 XW9 53 
XW9 H60 H15 H 0 1 N N N N N N -11.198 11.040 43.912 7.087   3.392  0.976  H60 XW9 54 
XW9 H62 H16 H 0 1 N N N N N N -9.178  10.229 42.589 7.863   4.404  -1.217 H62 XW9 55 
XW9 H61 H17 H 0 1 N N N N N N -9.685  8.516  42.772 6.245   3.971  -1.989 H61 XW9 56 
XW9 H40 H18 H 0 1 N N N N N N -13.559 11.295 52.445 -1.629  -1.880 0.382  H40 XW9 57 
XW9 H41 H19 H 0 1 N N N N N N -13.896 12.638 51.301 -1.480  -1.687 -1.387 H41 XW9 58 
XW9 H43 H20 H 0 1 N N N N N N -10.574 12.128 49.739 -3.713  1.052  -1.276 H43 XW9 59 
XW9 H42 H21 H 0 1 N N N N N N -10.247 10.785 50.885 -3.863  0.859  0.493  H42 XW9 60 
XW9 H45 H22 H 0 1 N N N N N N -11.618 10.063 47.833 -1.250  3.044  -0.851 H45 XW9 61 
XW9 H44 H23 H 0 1 N N N N N N -11.731 8.701  49.000 -1.398  2.851  0.918  H44 XW9 62 
XW9 H64 H24 H 0 1 N N N N N N -11.973 9.068  41.605 5.044   5.412  -0.282 H64 XW9 63 
XW9 H63 H25 H 0 1 N N N N N N -11.466 10.781 41.421 6.662   5.845  0.490  H63 XW9 64 
XW9 H65 H26 H 0 1 N N N N N N -12.752 10.472 45.825 3.709   4.287  0.312  H65 XW9 65 
XW9 H66 H27 H 0 1 N N N N N N -9.278  13.756 54.721 -4.945  0.729  -0.297 H66 XW9 66 
XW9 H67 H28 H 0 1 N N N N N N -9.590  11.992 54.855 -5.858  0.679  -1.830 H67 XW9 67 
XW9 H68 H29 H 0 1 N N N N N N -7.221  13.726 50.889 -7.317  -2.627 0.661  H68 XW9 68 
XW9 H69 H30 H 0 1 N N N N N N -8.006  12.110 50.872 -8.598  -2.480 -0.570 H69 XW9 69 
XW9 H71 H31 H 0 1 N N N N N N -9.822  13.761 50.980 -7.043  -1.762 -2.254 H71 XW9 70 
XW9 H70 H32 H 0 1 N N N N N N -9.000  14.669 52.294 -6.229  -3.114 -1.428 H70 XW9 71 
XW9 H72 H33 H 0 1 N N N N N N -3.889  12.155 52.553 -9.935  -0.987 2.314  H72 XW9 72 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XW9 N1  C2  SING N N 1  
XW9 N1  C31 SING N N 2  
XW9 N1  C35 SING N N 3  
XW9 C2  O3  DOUB N N 4  
XW9 C2  N4  SING N N 5  
XW9 N4  C5  SING N N 6  
XW9 N4  C8  SING N N 7  
XW9 C5  C6  SING N N 8  
XW9 C6  C7  DOUB N N 9  
XW9 C6  C11 SING N N 10 
XW9 C7  C8  SING N N 11 
XW9 C7  C9  SING N N 12 
XW9 C9  N10 SING N N 13 
XW9 N10 C11 SING N N 14 
XW9 N10 C12 SING N N 15 
XW9 C12 O13 DOUB N N 16 
XW9 C12 C14 SING N N 17 
XW9 C14 C15 DOUB Y N 18 
XW9 C14 C30 SING Y N 19 
XW9 C15 C16 SING Y N 20 
XW9 C16 O17 SING N N 21 
XW9 C16 N25 DOUB Y N 22 
XW9 O17 C18 SING N N 23 
XW9 C18 C19 SING N N 24 
XW9 C19 C20 SING N N 25 
XW9 C19 C24 SING N N 26 
XW9 C20 C21 SING N N 27 
XW9 C21 O22 SING N N 28 
XW9 O22 C23 SING N N 29 
XW9 C23 C24 SING N N 30 
XW9 N25 C26 SING Y N 31 
XW9 C26 C27 SING N N 32 
XW9 C26 C30 DOUB Y N 33 
XW9 C27 C28 SING N N 34 
XW9 C27 C29 SING N N 35 
XW9 C28 C29 SING N N 36 
XW9 C31 C32 SING N N 37 
XW9 C32 C33 DOUB Y N 38 
XW9 C32 O38 SING Y N 39 
XW9 C33 C34 SING N N 40 
XW9 C33 C36 SING Y N 41 
XW9 C34 C35 SING N N 42 
XW9 C36 N37 DOUB Y N 43 
XW9 C36 O39 SING N N 44 
XW9 N37 O38 SING Y N 45 
XW9 C11 H46 SING N N 46 
XW9 C11 H47 SING N N 47 
XW9 C15 H48 SING N N 48 
XW9 C18 H50 SING N N 49 
XW9 C18 H49 SING N N 50 
XW9 C19 H51 SING N N 51 
XW9 C20 H53 SING N N 52 
XW9 C20 H52 SING N N 53 
XW9 C21 H54 SING N N 54 
XW9 C21 H55 SING N N 55 
XW9 C23 H57 SING N N 56 
XW9 C23 H56 SING N N 57 
XW9 C24 H59 SING N N 58 
XW9 C24 H58 SING N N 59 
XW9 C27 H60 SING N N 60 
XW9 C28 H62 SING N N 61 
XW9 C28 H61 SING N N 62 
XW9 C5  H40 SING N N 63 
XW9 C5  H41 SING N N 64 
XW9 C8  H43 SING N N 65 
XW9 C8  H42 SING N N 66 
XW9 C9  H45 SING N N 67 
XW9 C9  H44 SING N N 68 
XW9 C29 H64 SING N N 69 
XW9 C29 H63 SING N N 70 
XW9 C30 H65 SING N N 71 
XW9 C31 H66 SING N N 72 
XW9 C31 H67 SING N N 73 
XW9 C34 H68 SING N N 74 
XW9 C34 H69 SING N N 75 
XW9 C35 H71 SING N N 76 
XW9 C35 H70 SING N N 77 
XW9 O39 H72 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XW9 SMILES           ACDLabs              12.01 "O=C(c1cc(nc(OCC2CCOCC2)c1)C1CC1)N1CC=2CN(CC=2C1)C(=O)N1Cc2onc(O)c2CC1"                                                                                                                    
XW9 InChI            InChI                1.06  "InChI=1S/C28H33N5O6/c34-26-22-3-6-31(15-24(22)39-30-26)28(36)33-13-20-11-32(12-21(20)14-33)27(35)19-9-23(18-1-2-18)29-25(10-19)38-16-17-4-7-37-8-5-17/h9-10,17-18H,1-8,11-16H2,(H,30,34)" 
XW9 InChIKey         InChI                1.06  IFTRMTXDKJQHOD-UHFFFAOYSA-N                                                                                                                                                                
XW9 SMILES_CANONICAL CACTVS               3.385 "Oc1noc2CN(CCc12)C(=O)N3CC4=C(C3)CN(C4)C(=O)c5cc(OCC6CCOCC6)nc(c5)C7CC7"                                                                                                                   
XW9 SMILES           CACTVS               3.385 "Oc1noc2CN(CCc12)C(=O)N3CC4=C(C3)CN(C4)C(=O)c5cc(OCC6CCOCC6)nc(c5)C7CC7"                                                                                                                   
XW9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCc7c(onc7O)C6"                                                                                                                   
XW9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1c(cc(nc1C2CC2)OCC3CCOCC3)C(=O)N4CC5=C(C4)CN(C5)C(=O)N6CCc7c(onc7O)C6"                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XW9 "SYSTEMATIC NAME" ACDLabs              12.01 "[5-{2-cyclopropyl-6-[(oxan-4-yl)methoxy]pyridine-4-carbonyl}-3,4,5,6-tetrahydropyrrolo[3,4-c]pyrrol-2(1H)-yl](3-hydroxy-4,7-dihydro[1,2]oxazolo[5,4-c]pyridin-6(5H)-yl)methanone"   
XW9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "[2-cyclopropyl-6-(oxan-4-ylmethoxy)pyridin-4-yl]-[5-[(3-oxidanyl-5,7-dihydro-4~{H}-[1,2]oxazolo[5,4-c]pyridin-6-yl)carbonyl]-1,3,4,6-tetrahydropyrrolo[3,4-c]pyrrol-2-yl]methanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XW9 "Create component" 2023-06-08 RCSB 
XW9 "Initial release"  2024-12-18 RCSB 
# 
