data_XE9
# 
_chem_comp.id                                    XE9 
_chem_comp.name                                  "[3-(3-chloranyl-2-piperazin-1-yl-quinolin-6-yl)phenyl]methanamine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H21 Cl N4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-10-31 
_chem_comp.pdbx_modified_date                    2024-11-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        352.861 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XE9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8QZT 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              ? 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XE9 N1  N1  N  0 1 N N N N N N 136.073 158.479 183.338 -7.315 -1.990 1.023  N1  XE9 1  
XE9 N3  N2  N  0 1 N N N N N N 135.175 162.900 173.082 4.059  -0.243 0.006  N3  XE9 2  
XE9 C4  C1  C  0 1 Y N N N N N 135.115 161.921 180.806 -3.669 0.331  -0.121 C4  XE9 3  
XE9 C5  C2  C  0 1 Y N N N N N 135.863 160.991 181.528 -4.597 -0.705 -0.211 C5  XE9 4  
XE9 C6  C3  C  0 1 Y N N N N N 135.739 160.862 182.903 -5.947 -0.419 -0.229 C6  XE9 5  
XE9 C7  C4  C  0 1 N N N N N N 136.566 159.845 183.632 -6.951 -1.538 -0.327 C7  XE9 6  
XE9 C8  C5  C  0 1 Y N N N N N 135.282 162.053 179.336 -2.217 0.031  -0.108 C8  XE9 7  
XE9 C10 C6  C  0 1 Y N N N N N 134.429 162.616 177.143 0.069  0.773  -0.018 C10 XE9 8  
XE9 C13 C7  C  0 1 Y N N N N N 136.521 161.745 178.716 -1.780 -1.301 -0.181 C13 XE9 9  
XE9 C15 C8  C  0 1 Y N N N N N 133.575 163.162 174.989 2.350  1.452  0.069  C15 XE9 10 
XE9 C17 C9  C  0 1 N N N N N N 136.607 162.807 172.752 4.398  -1.017 1.208  C17 XE9 11 
XE9 C20 C10 C  0 1 N N N N N N 134.168 162.919 172.022 4.422  -0.980 -1.212 C20 XE9 12 
XE9 C1  C11 C  0 1 Y N N N N N 134.844 161.672 183.577 -6.380 0.893  -0.156 C1  XE9 13 
XE9 C11 C12 C  0 1 Y N N N N N 135.662 162.303 176.551 0.501  -0.575 -0.086 C11 XE9 14 
XE9 C12 C13 C  0 1 Y N N N N N 136.703 161.847 177.373 -0.455 -1.602 -0.171 C12 XE9 15 
XE9 C14 C14 C  0 1 Y N N N N N 133.383 163.049 176.328 1.033  1.801  0.062  C14 XE9 16 
XE9 C16 C15 C  0 1 Y N N N N N 134.856 162.859 174.416 2.714  0.098  -0.002 C16 XE9 17 
XE9 C18 C16 C  0 1 N N N N N N 137.013 163.230 171.352 5.902  -1.305 1.218  C18 XE9 18 
XE9 C19 C17 C  0 1 N N N N N N 134.780 162.679 170.673 5.925  -1.267 -1.202 C19 XE9 19 
XE9 C2  C18 C  0 1 Y N N N N N 134.093 162.599 182.887 -5.464 1.925  -0.066 C2  XE9 20 
XE9 C3  C19 C  0 1 Y N N N N N 134.229 162.727 181.517 -4.111 1.651  -0.048 C3  XE9 21 
XE9 C9  C20 C  0 1 Y N N N N N 134.263 162.487 178.533 -1.302 1.065  -0.029 C9  XE9 22 
XE9 N2  N3  N  0 1 Y N N N N N 135.855 162.414 175.201 1.809  -0.856 -0.075 N2  XE9 23 
XE9 N4  N4  N  0 1 N N N N N N 135.874 163.654 170.511 6.265  -2.042 -0.000 N4  XE9 24 
XE9 CL1 CL1 CL 0 0 N N N N N N 132.236 163.709 174.052 3.575  2.678  0.166  CL1 XE9 25 
XE9 H7  H1  H  0 1 N N N N N N 136.631 157.810 183.829 -7.661 -1.223 1.580  H7  XE9 26 
XE9 H8  H2  H  0 1 N N N N N N 135.121 158.398 183.632 -7.988 -2.741 0.984  H8  XE9 27 
XE9 H4  H4  H  0 1 N N N N N N 136.558 160.354 181.001 -4.260 -1.730 -0.267 H4  XE9 28 
XE9 H5  H5  H  0 1 N N N N N N 137.614 159.930 183.310 -6.517 -2.369 -0.883 H5  XE9 29 
XE9 H6  H6  H  0 1 N N N N N N 136.499 160.030 184.714 -7.843 -1.182 -0.844 H6  XE9 30 
XE9 H12 H7  H  0 1 N N N N N N 137.346 161.419 179.332 -2.506 -2.097 -0.246 H12 XE9 31 
XE9 H14 H8  H  0 1 N N N N N N 136.912 161.759 172.885 4.131  -0.445 2.096  H14 XE9 32 
XE9 H15 H9  H  0 1 N N N N N N 137.155 163.442 173.464 3.848  -1.958 1.202  H15 XE9 33 
XE9 H23 H10 H  0 1 N N N N N N 133.672 163.901 172.019 3.872  -1.921 -1.246 H23 XE9 34 
XE9 H22 H11 H  0 1 N N N N N N 133.425 162.133 172.222 4.172  -0.381 -2.088 H22 XE9 35 
XE9 H1  H12 H  0 1 N N N N N N 134.733 161.578 184.647 -7.437 1.112  -0.171 H1  XE9 36 
XE9 H11 H13 H  0 1 N N N N N N 137.653 161.576 176.937 -0.136 -2.633 -0.227 H11 XE9 37 
XE9 H13 H14 H  0 1 N N N N N N 132.424 163.293 176.761 0.734  2.837  0.115  H13 XE9 38 
XE9 H17 H15 H  0 1 N N N N N N 137.510 162.380 170.862 6.452  -0.364 1.252  H17 XE9 39 
XE9 H16 H16 H  0 1 N N N N N N 137.718 164.070 171.433 6.151  -1.904 2.094  H16 XE9 40 
XE9 H20 H17 H  0 1 N N N N N N 134.026 162.825 169.886 6.193  -1.839 -2.091 H20 XE9 41 
XE9 H21 H18 H  0 1 N N N N N N 135.177 161.655 170.616 6.476  -0.326 -1.196 H21 XE9 42 
XE9 H2  H19 H  0 1 N N N N N N 133.395 163.228 183.419 -5.807 2.947  -0.010 H2  XE9 43 
XE9 H3  H20 H  0 1 N N N N N N 133.639 163.463 180.990 -3.397 2.457  0.022  H3  XE9 44 
XE9 H10 H21 H  0 1 N N N N N N 133.310 162.736 178.977 -1.641 2.089  0.023  H10 XE9 45 
XE9 H19 H22 H  0 1 N N N N N N 136.157 163.686 169.552 5.825  -2.950 -0.018 H19 XE9 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XE9 N4  C19 SING N N 1  
XE9 N4  C18 SING N N 2  
XE9 C19 C20 SING N N 3  
XE9 C18 C17 SING N N 4  
XE9 C20 N3  SING N N 5  
XE9 C17 N3  SING N N 6  
XE9 N3  C16 SING N N 7  
XE9 CL1 C15 SING N N 8  
XE9 C16 C15 DOUB Y N 9  
XE9 C16 N2  SING Y N 10 
XE9 C15 C14 SING Y N 11 
XE9 N2  C11 DOUB Y N 12 
XE9 C14 C10 DOUB Y N 13 
XE9 C11 C10 SING Y N 14 
XE9 C11 C12 SING Y N 15 
XE9 C10 C9  SING Y N 16 
XE9 C12 C13 DOUB Y N 17 
XE9 C9  C8  DOUB Y N 18 
XE9 C13 C8  SING Y N 19 
XE9 C8  C4  SING N N 20 
XE9 C4  C3  DOUB Y N 21 
XE9 C4  C5  SING Y N 22 
XE9 C3  C2  SING Y N 23 
XE9 C5  C6  DOUB Y N 24 
XE9 C2  C1  DOUB Y N 25 
XE9 C6  C1  SING Y N 26 
XE9 C6  C7  SING N N 27 
XE9 N1  C7  SING N N 28 
XE9 N1  H7  SING N N 29 
XE9 N1  H8  SING N N 30 
XE9 C5  H4  SING N N 31 
XE9 C7  H5  SING N N 32 
XE9 C7  H6  SING N N 33 
XE9 C13 H12 SING N N 34 
XE9 C17 H14 SING N N 35 
XE9 C17 H15 SING N N 36 
XE9 C20 H23 SING N N 37 
XE9 C20 H22 SING N N 38 
XE9 C1  H1  SING N N 39 
XE9 C12 H11 SING N N 40 
XE9 C14 H13 SING N N 41 
XE9 C18 H17 SING N N 42 
XE9 C18 H16 SING N N 43 
XE9 C19 H20 SING N N 44 
XE9 C19 H21 SING N N 45 
XE9 C2  H2  SING N N 46 
XE9 C3  H3  SING N N 47 
XE9 C9  H10 SING N N 48 
XE9 N4  H19 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XE9 InChI            InChI                1.06  "InChI=1S/C20H21ClN4/c21-18-12-17-11-16(15-3-1-2-14(10-15)13-22)4-5-19(17)24-20(18)25-8-6-23-7-9-25/h1-5,10-12,23H,6-9,13,22H2" 
XE9 InChIKey         InChI                1.06  PMBAQAZUQBDHLD-UHFFFAOYSA-N                                                                                                     
XE9 SMILES_CANONICAL CACTVS               3.385 "NCc1cccc(c1)c2ccc3nc(N4CCNCC4)c(Cl)cc3c2"                                                                                      
XE9 SMILES           CACTVS               3.385 "NCc1cccc(c1)c2ccc3nc(N4CCNCC4)c(Cl)cc3c2"                                                                                      
XE9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)c2ccc3c(c2)cc(c(n3)N4CCNCC4)Cl)CN"                                                                                  
XE9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(cc(c1)c2ccc3c(c2)cc(c(n3)N4CCNCC4)Cl)CN"                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           XE9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[3-(3-chloranyl-2-piperazin-1-yl-quinolin-6-yl)phenyl]methanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XE9 "Create component" 2023-10-31 PDBE 
XE9 "Initial release"  2024-11-06 RCSB 
# 
