data_WU9
# 
_chem_comp.id                                    WU9 
_chem_comp.name                                  "(5R)-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-9a,11a-dimethyl-7-(2-{2-[(prop-2-yn-1-yl)oxy]ethoxy}ethoxy)hexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]-1-fluorohexan-2-one (non-preferred name)" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H51 F O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-19 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.743 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     WU9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8ETK 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
WU9 C14 C1  C 0 1 N N N N N N 7.056 48.402 -4.084 1.186   1.980  -1.068 C14 WU9 1  
WU9 C11 C2  C 0 1 N N S N N N 5.300 50.266 -4.475 -0.772  2.731  0.297  C11 WU9 2  
WU9 C8  C3  C 0 1 N N R N N N 5.105 51.453 -7.228 -3.311  1.600  -0.629 C8  WU9 3  
WU9 C9  C4  C 0 1 N N N N N N 6.450 51.112 -6.619 -2.238  2.068  -1.614 C9  WU9 4  
WU9 C10 C5  C 0 1 N N N N N N 6.377 51.179 -5.093 -1.436  3.220  -0.992 C10 WU9 5  
WU9 C12 C6  C 0 1 N N N N N N 5.210 50.652 -2.986 0.037   3.870  0.919  C12 WU9 6  
WU9 C13 C7  C 0 1 N N S N N N 5.667 48.761 -4.631 0.158   1.560  -0.024 C13 WU9 7  
WU9 C15 C8  C 0 1 N N N N N N 7.383 46.904 -4.186 2.193   0.851  -1.347 C15 WU9 8  
WU9 C16 C9  C 0 1 N N R N N N 6.320 46.061 -3.479 2.847   0.493  -0.027 C16 WU9 9  
WU9 C17 C10 C 0 1 N N N N N N 6.275 46.382 -1.971 3.456   1.746  0.605  C17 WU9 10 
WU9 C18 C11 C 0 1 N N S N N N 4.980 46.385 -4.171 1.740   -0.077 0.901  C18 WU9 11 
WU9 C19 C12 C 0 1 N N N N N N 4.024 45.337 -3.605 2.569   -0.669 2.046  C19 WU9 12 
WU9 C20 C13 C 0 1 N N N N N N 4.893 44.068 -3.517 3.753   -1.347 1.303  C20 WU9 13 
WU9 C21 C14 C 0 1 N N R N N N 6.373 44.518 -3.686 3.884   -0.624 -0.060 C21 WU9 14 
WU9 C22 C15 C 0 1 N N R N N N 7.335 43.647 -2.853 5.289   -0.037 -0.215 C22 WU9 15 
WU9 C23 C16 C 0 1 N N N N N N 8.813 44.054 -2.952 5.387   0.703  -1.551 C23 WU9 16 
WU9 C24 C17 C 0 1 N N N N N N 7.164 42.192 -3.303 6.320   -1.166 -0.180 C24 WU9 17 
WU9 C25 C18 C 0 1 N N N N N N 8.196 41.242 -2.695 7.729   -0.570 -0.210 C25 WU9 18 
WU9 C26 C19 C 0 1 N N N N N N 7.644 39.855 -2.672 8.746   -1.682 -0.175 C26 WU9 19 
WU9 C27 C20 C 0 1 N N N N N N 7.766 39.216 -1.338 10.218  -1.359 -0.195 C27 WU9 20 
WU9 C28 C21 C 0 1 N N R N N N 4.559 47.847 -4.060 0.832   1.079  1.271  C28 WU9 21 
WU9 C29 C22 C 0 1 N N N N N N 3.232 48.127 -4.767 -0.243  0.616  2.255  C29 WU9 22 
WU9 C30 C23 C 0 1 N N N N N N 2.833 49.601 -4.679 -1.180  1.784  2.572  C30 WU9 23 
WU9 C31 C24 C 0 1 N N R N N N 3.941 50.526 -5.190 -1.847  2.268  1.283  C31 WU9 24 
WU9 C32 C25 C 0 1 N N N N N N 4.033 50.504 -6.720 -2.645  1.119  0.662  C32 WU9 25 
WU9 O3  O1  O 0 1 N N N N N N 5.222 51.474 -8.659 -4.055  0.527  -1.209 O3  WU9 26 
WU9 O4  O2  O 0 1 N N N N N N 7.038 39.320 -3.578 8.381   -2.832 -0.132 O4  WU9 27 
WU9 F1  F1  F 0 1 N Y N N N N 6.181 39.089 -0.614 10.957  -2.546 -0.157 F1  WU9 28 
WU9 H1  H1  H 0 1 N N N N N N 7.811 48.963 -4.654 0.671   2.235  -1.994 H1  WU9 29 
WU9 H2  H2  H 0 1 N N N N N N 7.101 48.698 -3.025 1.724   2.856  -0.706 H2  WU9 30 
WU9 H3  H3  H 0 1 N N N N N N 4.836 52.464 -6.887 -3.984  2.428  -0.404 H3  WU9 31 
WU9 H4  H4  H 0 1 N N N N N N 6.738 50.095 -6.924 -1.567  1.240  -1.841 H4  WU9 32 
WU9 H5  H5  H 0 1 N N N N N N 7.203 51.830 -6.978 -2.714  2.413  -2.533 H5  WU9 33 
WU9 H6  H6  H 0 1 N N N N N N 7.356 50.883 -4.687 -2.107  4.048  -0.764 H6  WU9 34 
WU9 H7  H7  H 0 1 N N N N N N 6.158 52.217 -4.803 -0.674  3.553  -1.696 H7  WU9 35 
WU9 H8  H8  H 0 1 N N N N N N 6.177 50.462 -2.498 -0.627  4.705  1.147  H8  WU9 36 
WU9 H9  H9  H 0 1 N N N N N N 4.959 51.719 -2.899 0.510   3.521  1.837  H9  WU9 37 
WU9 H10 H10 H 0 1 N N N N N N 4.429 50.051 -2.498 0.804   4.198  0.217  H10 WU9 38 
WU9 H11 H11 H 0 1 N N N N N N 5.700 48.565 -5.713 -0.436  0.738  -0.425 H11 WU9 39 
WU9 H12 H12 H 0 1 N N N N N N 7.423 46.616 -5.247 1.673   -0.018 -1.751 H12 WU9 40 
WU9 H13 H13 H 0 1 N N N N N N 8.361 46.717 -3.718 2.949   1.194  -2.054 H13 WU9 41 
WU9 H14 H14 H 0 1 N N N N N N 5.504 45.764 -1.487 2.681   2.501  0.736  H14 WU9 42 
WU9 H15 H15 H 0 1 N N N N N N 7.255 46.165 -1.521 3.884   1.493  1.575  H15 WU9 43 
WU9 H16 H16 H 0 1 N N N N N N 6.034 47.446 -1.830 4.238   2.137  -0.046 H16 WU9 44 
WU9 H17 H17 H 0 1 N N N N N N 5.108 46.164 -5.241 1.171   -0.860 0.400  H17 WU9 45 
WU9 H18 H18 H 0 1 N N N N N N 3.659 45.634 -2.610 2.930   0.118  2.708  H18 WU9 46 
WU9 H19 H19 H 0 1 N N N N N N 3.168 45.181 -4.278 1.989   -1.406 2.601  H19 WU9 47 
WU9 H20 H20 H 0 1 N N N N N N 4.618 43.365 -4.317 4.671   -1.232 1.879  H20 WU9 48 
WU9 H21 H21 H 0 1 N N N N N N 4.755 43.583 -2.540 3.539   -2.405 1.146  H21 WU9 49 
WU9 H22 H22 H 0 1 N N N N N N 6.632 44.353 -4.742 3.671   -1.315 -0.876 H22 WU9 50 
WU9 H23 H23 H 0 1 N N N N N N 7.031 43.717 -1.798 5.483   0.659  0.601  H23 WU9 51 
WU9 H24 H24 H 0 1 N N N N N N 9.421 43.382 -2.329 4.652   1.508  -1.576 H24 WU9 52 
WU9 H25 H25 H 0 1 N N N N N N 9.143 43.983 -3.999 6.388   1.122  -1.661 H25 WU9 53 
WU9 H26 H26 H 0 1 N N N N N N 8.933 45.089 -2.599 5.193   0.008  -2.367 H26 WU9 54 
WU9 H27 H27 H 0 1 N N N N N N 6.161 41.852 -3.008 6.191   -1.748 0.732  H27 WU9 55 
WU9 H28 H28 H 0 1 N N N N N N 7.257 42.153 -4.398 6.181   -1.812 -1.047 H28 WU9 56 
WU9 H29 H29 H 0 1 N N N N N N 9.114 41.261 -3.301 7.859   0.012  -1.122 H29 WU9 57 
WU9 H30 H30 H 0 1 N N N N N N 8.428 41.561 -1.668 7.869   0.076  0.657  H30 WU9 58 
WU9 H31 H31 H 0 1 N N N N N N 8.201 38.212 -1.450 10.457  -0.811 -1.107 H31 WU9 59 
WU9 H32 H32 H 0 1 N N N N N N 8.416 39.828 -0.695 10.467  -0.747 0.672  H32 WU9 60 
WU9 H33 H33 H 0 1 N N N N N N 4.436 48.089 -2.994 1.422   1.888  1.701  H33 WU9 61 
WU9 H34 H34 H 0 1 N N N N N N 2.445 47.518 -4.298 -0.815  -0.199 1.812  H34 WU9 62 
WU9 H35 H35 H 0 1 N N N N N N 3.329 47.848 -5.827 0.230   0.270  3.174  H35 WU9 63 
WU9 H36 H36 H 0 1 N N N N N N 2.619 49.849 -3.629 -1.945  1.455  3.276  H36 WU9 64 
WU9 H37 H37 H 0 1 N N N N N N 1.929 49.761 -5.285 -0.608  2.600  3.013  H37 WU9 65 
WU9 H38 H38 H 0 1 N N N N N N 3.643 51.548 -4.913 -2.516  3.099  1.509  H38 WU9 66 
WU9 H39 H39 H 0 1 N N N N N N 3.062 50.804 -7.141 -3.411  0.787  1.363  H39 WU9 67 
WU9 H40 H40 H 0 1 N N N N N N 4.275 49.483 -7.049 -1.974  0.290  0.437  H40 WU9 68 
WU9 C1  C26 C 0 1 N N N N N N ?     ?      ?      -5.198  0.949  -1.955 C1  WU9 69 
WU9 C2  C27 C 0 1 N N N N N N ?     ?      ?      -5.914  -0.276 -2.528 C2  WU9 70 
WU9 O1  O3  O 0 1 N N N N N N ?     ?      ?      -6.432  -1.068 -1.457 O1  WU9 71 
WU9 C4  C28 C 0 1 N N N N N N ?     ?      ?      -7.124  -2.243 -1.886 C4  WU9 72 
WU9 C3  C29 C 0 1 N N N N N N ?     ?      ?      -7.633  -3.010 -0.663 C3  WU9 73 
WU9 O2  O4  O 0 1 N N N N N N ?     ?      ?      -8.611  -2.223 0.019  O2  WU9 74 
WU9 C6  C30 C 0 1 N N N N N N ?     ?      ?      -9.153  -2.851 1.183  C6  WU9 75 
WU9 C5  C31 C 0 1 N N N N N N ?     ?      ?      -10.145 -1.959 1.804  C5  WU9 76 
WU9 C7  C32 C 0 1 N N N N N N ?     ?      ?      -10.936 -1.247 2.300  C7  WU9 77 
WU9 H41 H41 H 0 1 N N N N N N ?     ?      ?      -5.878  1.494  -1.301 H41 WU9 78 
WU9 H42 H42 H 0 1 N N N N N N ?     ?      ?      -4.880  1.598  -2.771 H42 WU9 79 
WU9 H43 H43 H 0 1 N N N N N N ?     ?      ?      -6.734  0.049  -3.169 H43 WU9 80 
WU9 H44 H44 H 0 1 N N N N N N ?     ?      ?      -5.210  -0.869 -3.111 H44 WU9 81 
WU9 H45 H45 H 0 1 N N N N N N ?     ?      ?      -7.968  -1.959 -2.514 H45 WU9 82 
WU9 H46 H46 H 0 1 N N N N N N ?     ?      ?      -6.444  -2.877 -2.455 H46 WU9 83 
WU9 H47 H47 H 0 1 N N N N N N ?     ?      ?      -8.082  -3.950 -0.985 H47 WU9 84 
WU9 H48 H48 H 0 1 N N N N N N ?     ?      ?      -6.799  -3.217 0.009  H48 WU9 85 
WU9 H49 H49 H 0 1 N N N N N N ?     ?      ?      -9.634  -3.788 0.899  H49 WU9 86 
WU9 H50 H50 H 0 1 N N N N N N ?     ?      ?      -8.352  -3.055 1.893  H50 WU9 87 
WU9 H51 H51 H 0 1 N N N N N N ?     ?      ?      -11.644 -0.611 2.744  H51 WU9 88 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
WU9 O3  C8  SING N N 1  
WU9 C8  C32 SING N N 2  
WU9 C8  C9  SING N N 3  
WU9 C32 C31 SING N N 4  
WU9 C9  C10 SING N N 5  
WU9 C31 C30 SING N N 6  
WU9 C31 C11 SING N N 7  
WU9 C10 C11 SING N N 8  
WU9 C29 C30 SING N N 9  
WU9 C29 C28 SING N N 10 
WU9 C13 C11 SING N N 11 
WU9 C13 C14 SING N N 12 
WU9 C13 C28 SING N N 13 
WU9 C11 C12 SING N N 14 
WU9 C15 C14 SING N N 15 
WU9 C15 C16 SING N N 16 
WU9 C18 C28 SING N N 17 
WU9 C18 C19 SING N N 18 
WU9 C18 C16 SING N N 19 
WU9 C21 C20 SING N N 20 
WU9 C21 C16 SING N N 21 
WU9 C21 C22 SING N N 22 
WU9 C19 C20 SING N N 23 
WU9 O4  C26 DOUB N N 24 
WU9 C16 C17 SING N N 25 
WU9 C24 C22 SING N N 26 
WU9 C24 C25 SING N N 27 
WU9 C23 C22 SING N N 28 
WU9 C25 C26 SING N N 29 
WU9 C26 C27 SING N N 30 
WU9 C27 F1  SING N N 31 
WU9 C14 H1  SING N N 32 
WU9 C14 H2  SING N N 33 
WU9 C8  H3  SING N N 34 
WU9 C9  H4  SING N N 35 
WU9 C9  H5  SING N N 36 
WU9 C10 H6  SING N N 37 
WU9 C10 H7  SING N N 38 
WU9 C12 H8  SING N N 39 
WU9 C12 H9  SING N N 40 
WU9 C12 H10 SING N N 41 
WU9 C13 H11 SING N N 42 
WU9 C15 H12 SING N N 43 
WU9 C15 H13 SING N N 44 
WU9 C17 H14 SING N N 45 
WU9 C17 H15 SING N N 46 
WU9 C17 H16 SING N N 47 
WU9 C18 H17 SING N N 48 
WU9 C19 H18 SING N N 49 
WU9 C19 H19 SING N N 50 
WU9 C20 H20 SING N N 51 
WU9 C20 H21 SING N N 52 
WU9 C21 H22 SING N N 53 
WU9 C22 H23 SING N N 54 
WU9 C23 H24 SING N N 55 
WU9 C23 H25 SING N N 56 
WU9 C23 H26 SING N N 57 
WU9 C24 H27 SING N N 58 
WU9 C24 H28 SING N N 59 
WU9 C25 H29 SING N N 60 
WU9 C25 H30 SING N N 61 
WU9 C27 H31 SING N N 62 
WU9 C27 H32 SING N N 63 
WU9 C28 H33 SING N N 64 
WU9 C29 H34 SING N N 65 
WU9 C29 H35 SING N N 66 
WU9 C30 H36 SING N N 67 
WU9 C30 H37 SING N N 68 
WU9 C31 H38 SING N N 69 
WU9 C32 H39 SING N N 70 
WU9 C32 H40 SING N N 71 
WU9 O3  C1  SING N N 72 
WU9 C1  C2  SING N N 73 
WU9 C2  O1  SING N N 74 
WU9 O1  C4  SING N N 75 
WU9 C4  C3  SING N N 76 
WU9 C3  O2  SING N N 77 
WU9 O2  C6  SING N N 78 
WU9 C6  C5  SING N N 79 
WU9 C5  C7  TRIP N N 80 
WU9 C1  H41 SING N N 81 
WU9 C1  H42 SING N N 82 
WU9 C2  H43 SING N N 83 
WU9 C2  H44 SING N N 84 
WU9 C4  H45 SING N N 85 
WU9 C4  H46 SING N N 86 
WU9 C3  H47 SING N N 87 
WU9 C3  H48 SING N N 88 
WU9 C6  H49 SING N N 89 
WU9 C6  H50 SING N N 90 
WU9 C7  H51 SING N N 91 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
WU9 SMILES           ACDLabs              12.01 "FCC(=O)CCC(C)C1CCC2C3CCC4CC(CCC4(C)C3CCC12C)OCCOCCOCC#C"                                                                                                                                                       
WU9 InChI            InChI                1.06  "InChI=1S/C32H51FO4/c1-5-16-35-17-18-36-19-20-37-26-12-14-31(3)24(21-26)7-9-27-29-11-10-28(23(2)6-8-25(34)22-33)32(29,4)15-13-30(27)31/h1,23-24,26-30H,6-22H2,2-4H3/t23-,24-,26-,27+,28-,29+,30+,31+,32-/m1/s1" 
WU9 InChIKey         InChI                1.06  SORPIYTZLRHZCE-XONLEZLMSA-N                                                                                                                                                                                     
WU9 SMILES_CANONICAL CACTVS               3.385 "C[C@H](CCC(=O)CF)[C@H]1CC[C@H]2[C@@H]3CC[C@@H]4C[C@@H](CC[C@]4(C)[C@H]3CC[C@]12C)OCCOCCOCC#C"                                                                                                                  
WU9 SMILES           CACTVS               3.385 "C[CH](CCC(=O)CF)[CH]1CC[CH]2[CH]3CC[CH]4C[CH](CC[C]4(C)[CH]3CC[C]12C)OCCOCCOCC#C"                                                                                                                              
WU9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](CCC(=O)CF)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2CC[C@H]4[C@@]3(CC[C@H](C4)OCCOCCOCC#C)C)C"                                                                                                                
WU9 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(CCC(=O)CF)C1CCC2C1(CCC3C2CCC4C3(CCC(C4)OCCOCCOCC#C)C)C"                                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
WU9 "SYSTEMATIC NAME" ACDLabs              12.01 "(5R)-5-[(1R,3aS,3bR,5aR,7R,9aS,9bS,11aR)-9a,11a-dimethyl-7-(2-{2-[(prop-2-yn-1-yl)oxy]ethoxy}ethoxy)hexadecahydro-1H-cyclopenta[a]phenanthren-1-yl]-1-fluorohexan-2-one (non-preferred name)"                                      
WU9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{R})-5-[(3~{R},5~{R},8~{R},9~{S},10~{S},13~{R},14~{S},17~{R})-10,13-dimethyl-3-[2-(2-prop-2-ynoxyethoxy)ethoxy]-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1~{H}-cyclopenta[a]phenanthren-17-yl]-1-fluoranyl-hexan-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
WU9 "Create component" 2022-10-19 RCSB 
WU9 "Initial release"  2023-11-01 RCSB 
WU9 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            WU9 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C27 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
