data_V59
# 
_chem_comp.id                                    V59 
_chem_comp.name                                  "2-(3-phenoxyphenyl)-N-[5-[[(3R)-1-pyridazin-3-ylpyrrolidin-3-yl]amino]-1,3,4-thiadiazol-2-yl]ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H23 N7 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-07-05 
_chem_comp.pdbx_modified_date                    2023-10-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        473.550 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     V59 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8JUE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
V59 O1  O1  O 0 1 N N N -4.820 -1.893 43.657 -2.402 1.170  0.326  O1  V59 1  
V59 C1  C1  C 0 1 N N N -4.029 -2.018 42.723 -2.611 1.490  -0.826 C1  V59 2  
V59 N1  N1  N 0 1 N N N -3.455 -3.229 42.438 -1.599 1.505  -1.715 N1  V59 3  
V59 C2  C2  C 0 1 Y N N -2.497 -4.008 43.041 -0.312 1.154  -1.312 C2  V59 4  
V59 N2  N2  N 0 1 Y N N -1.733 -4.862 42.350 0.026  0.792  -0.116 N2  V59 5  
V59 N3  N3  N 0 1 Y N N -0.804 -5.590 43.142 1.358  0.487  0.061  N3  V59 6  
V59 C3  C3  C 0 1 Y N N -0.889 -5.291 44.439 2.103  0.602  -0.994 C3  V59 7  
V59 N4  N4  N 0 1 N N N -0.124 -5.843 45.368 3.468  0.349  -1.048 N4  V59 8  
V59 C4  C4  C 0 1 N N R 0.876  -6.822 45.002 4.180  -0.088 0.156  C4  V59 9  
V59 C5  C5  C 0 1 N N N 1.218  -7.786 46.129 4.638  1.129  0.992  C5  V59 10 
V59 C6  C6  C 0 1 N N N 1.980  -6.895 47.072 6.043  0.760  1.503  C6  V59 11 
V59 N5  N5  N 0 1 N N N 2.734  -6.016 46.174 6.341  -0.601 1.007  N5  V59 12 
V59 C7  C7  C 0 1 Y N N 3.678  -5.117 46.613 7.694  -0.742 0.719  C7  V59 13 
V59 C8  C8  C 0 1 Y N N 4.419  -4.331 45.733 8.646  -0.563 1.724  C8  V59 14 
V59 C9  C9  C 0 1 Y N N 5.293  -3.420 46.251 9.981  -0.715 1.386  C9  V59 15 
V59 C10 C10 C 0 1 Y N N 5.427  -3.333 47.631 10.290 -1.035 0.071  C10 V59 16 
V59 N6  N6  N 0 1 Y N N 4.715  -4.094 48.442 9.325  -1.185 -0.815 N6  V59 17 
V59 N7  N7  N 0 1 Y N N 3.842  -4.990 47.943 8.086  -1.051 -0.508 N7  V59 18 
V59 C11 C11 C 0 1 N N N 2.270  -6.212 44.802 5.517  -0.776 -0.216 C11 V59 19 
V59 S1  S1  S 0 1 Y N N -2.167 -4.037 44.846 1.109  1.124  -2.350 S1  V59 20 
V59 C12 C12 C 0 1 N N N -3.736 -0.875 41.746 -4.004 1.864  -1.263 C12 V59 21 
V59 C13 C13 C 0 1 Y N N -3.966 0.526  42.283 -4.944 1.760  -0.090 C13 V59 22 
V59 C14 C14 C 0 1 Y N N -2.906 1.268  42.802 -5.590 0.567  0.174  C14 V59 23 
V59 C15 C15 C 0 1 Y N N -3.114 2.538  43.327 -6.455 0.472  1.254  C15 V59 24 
V59 O2  O2  O 0 1 N N N -2.088 3.321  43.872 -7.091 -0.699 1.515  O2  V59 25 
V59 C16 C16 C 0 1 Y N N -0.808 2.998  44.379 -6.842 -1.757 0.699  C16 V59 26 
V59 C17 C17 C 0 1 Y N N 0.118  4.031  44.414 -5.806 -2.632 0.992  C17 V59 27 
V59 C18 C18 C 0 1 Y N N 1.405  3.788  44.889 -5.555 -3.706 0.160  C18 V59 28 
V59 C19 C19 C 0 1 Y N N 1.766  2.537  45.328 -6.334 -3.909 -0.964 C19 V59 29 
V59 C20 C20 C 0 1 Y N N 0.834  1.522  45.305 -7.367 -3.037 -1.259 C20 V59 30 
V59 C21 C21 C 0 1 Y N N -0.460 1.740  44.839 -7.627 -1.966 -0.427 C21 V59 31 
V59 C22 C22 C 0 1 Y N N -4.375 3.101  43.317 -6.669 1.576  2.068  C22 V59 32 
V59 C23 C23 C 0 1 Y N N -5.432 2.371  42.801 -6.021 2.766  1.800  C23 V59 33 
V59 C24 C24 C 0 1 Y N N -5.231 1.099  42.288 -5.155 2.856  0.726  C24 V59 34 
V59 H1  H1  H 0 1 N N N -3.815 -3.639 41.600 -1.765 1.761  -2.636 H1  V59 35 
V59 H2  H2  H 0 1 N N N 0.359  -5.096 45.824 3.950  0.460  -1.882 H2  V59 36 
V59 H3  H3  H 0 1 N N N 0.577  -7.381 44.103 3.554  -0.752 0.753  H3  V59 37 
V59 H4  H4  H 0 1 N N N 0.310  -8.188 46.602 4.685  2.021  0.367  H4  V59 38 
V59 H5  H5  H 0 1 N N N 1.843  -8.617 45.770 3.961  1.289  1.830  H5  V59 39 
V59 H6  H6  H 0 1 N N N 1.294  -6.315 47.706 6.777  1.466  1.114  H6  V59 40 
V59 H7  H7  H 0 1 N N N 2.658  -7.483 47.708 6.057  0.772  2.592  H7  V59 41 
V59 H8  H8  H 0 1 N N N 4.304  -4.440 44.665 8.351  -0.314 2.732  H8  V59 42 
V59 H9  H9  H 0 1 N N N 5.870  -2.779 45.601 10.759 -0.587 2.124  H9  V59 43 
V59 H10 H10 H 0 1 N N N 6.129  -2.627 48.050 11.320 -1.160 -0.227 H10 V59 44 
V59 H11 H11 H 0 1 N N N 2.930  -6.901 44.255 5.359  -1.834 -0.426 H11 V59 45 
V59 H12 H12 H 0 1 N N N 2.211  -5.255 44.263 5.981  -0.278 -1.068 H12 V59 46 
V59 H13 H13 H 0 1 N N N -4.381 -1.009 40.865 -4.004 2.887  -1.639 H13 V59 47 
V59 H14 H14 H 0 1 N N N -2.681 -0.952 41.443 -4.331 1.187  -2.052 H14 V59 48 
V59 H15 H15 H 0 1 N N N -1.910 0.850  42.796 -5.422 -0.290 -0.461 H15 V59 49 
V59 H16 H16 H 0 1 N N N -0.158 5.019  44.075 -5.197 -2.474 1.869  H16 V59 50 
V59 H17 H17 H 0 1 N N N 2.126  4.591  44.912 -4.749 -4.388 0.388  H17 V59 51 
V59 H18 H18 H 0 1 N N N 2.768  2.351  45.687 -6.136 -4.749 -1.613 H18 V59 52 
V59 H19 H19 H 0 1 N N N 1.112  0.539  45.655 -7.974 -3.198 -2.137 H19 V59 53 
V59 H20 H20 H 0 1 N N N -1.183 0.938  44.837 -8.436 -1.289 -0.654 H20 V59 54 
V59 H21 H21 H 0 1 N N N -4.534 4.096  43.706 -7.343 1.505  2.909  H21 V59 55 
V59 H22 H22 H 0 1 N N N -6.424 2.797  42.798 -6.187 3.625  2.433  H22 V59 56 
V59 H23 H23 H 0 1 N N N -6.068 0.547  41.887 -4.645 3.786  0.521  H23 V59 57 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
V59 C12 C13 SING N N 1  
V59 C12 C1  SING N N 2  
V59 C13 C24 DOUB Y N 3  
V59 C13 C14 SING Y N 4  
V59 C24 C23 SING Y N 5  
V59 N2  C2  DOUB Y N 6  
V59 N2  N3  SING Y N 7  
V59 N1  C1  SING N N 8  
V59 N1  C2  SING N N 9  
V59 C1  O1  DOUB N N 10 
V59 C23 C22 DOUB Y N 11 
V59 C14 C15 DOUB Y N 12 
V59 C2  S1  SING Y N 13 
V59 N3  C3  DOUB Y N 14 
V59 C22 C15 SING Y N 15 
V59 C15 O2  SING N N 16 
V59 O2  C16 SING N N 17 
V59 C16 C17 DOUB Y N 18 
V59 C16 C21 SING Y N 19 
V59 C17 C18 SING Y N 20 
V59 C3  S1  SING Y N 21 
V59 C3  N4  SING N N 22 
V59 C11 C4  SING N N 23 
V59 C11 N5  SING N N 24 
V59 C21 C20 DOUB Y N 25 
V59 C18 C19 DOUB Y N 26 
V59 C4  N4  SING N N 27 
V59 C4  C5  SING N N 28 
V59 C20 C19 SING Y N 29 
V59 C8  C9  DOUB Y N 30 
V59 C8  C7  SING Y N 31 
V59 C5  C6  SING N N 32 
V59 N5  C7  SING N N 33 
V59 N5  C6  SING N N 34 
V59 C9  C10 SING Y N 35 
V59 C7  N7  DOUB Y N 36 
V59 C10 N6  DOUB Y N 37 
V59 N7  N6  SING Y N 38 
V59 N1  H1  SING N N 39 
V59 N4  H2  SING N N 40 
V59 C4  H3  SING N N 41 
V59 C5  H4  SING N N 42 
V59 C5  H5  SING N N 43 
V59 C6  H6  SING N N 44 
V59 C6  H7  SING N N 45 
V59 C8  H8  SING N N 46 
V59 C9  H9  SING N N 47 
V59 C10 H10 SING N N 48 
V59 C11 H11 SING N N 49 
V59 C11 H12 SING N N 50 
V59 C12 H13 SING N N 51 
V59 C12 H14 SING N N 52 
V59 C14 H15 SING N N 53 
V59 C17 H16 SING N N 54 
V59 C18 H17 SING N N 55 
V59 C19 H18 SING N N 56 
V59 C20 H19 SING N N 57 
V59 C21 H20 SING N N 58 
V59 C22 H21 SING N N 59 
V59 C23 H22 SING N N 60 
V59 C24 H23 SING N N 61 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
V59 InChI            InChI                1.06  "InChI=1S/C24H23N7O2S/c32-22(15-17-6-4-9-20(14-17)33-19-7-2-1-3-8-19)27-24-30-29-23(34-24)26-18-11-13-31(16-18)21-10-5-12-25-28-21/h1-10,12,14,18H,11,13,15-16H2,(H,26,29)(H,27,30,32)/t18-/m1/s1" 
V59 InChIKey         InChI                1.06  JOKJBMFEUFULOX-GOSISDBHSA-N                                                                                                                                                                        
V59 SMILES_CANONICAL CACTVS               3.385 "O=C(Cc1cccc(Oc2ccccc2)c1)Nc3sc(N[C@@H]4CCN(C4)c5cccnn5)nn3"                                                                                                                                       
V59 SMILES           CACTVS               3.385 "O=C(Cc1cccc(Oc2ccccc2)c1)Nc3sc(N[CH]4CCN(C4)c5cccnn5)nn3"                                                                                                                                         
V59 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Oc2cccc(c2)CC(=O)Nc3nnc(s3)N[C@@H]4CCN(C4)c5cccnn5"                                                                                                                                     
V59 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(cc1)Oc2cccc(c2)CC(=O)Nc3nnc(s3)NC4CCN(C4)c5cccnn5"                                                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           V59 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-(3-phenoxyphenyl)-~{N}-[5-[[(3~{R})-1-pyridazin-3-ylpyrrolidin-3-yl]amino]-1,3,4-thiadiazol-2-yl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
V59 "Create component" 2023-07-05 PDBJ 
V59 "Initial release"  2023-10-11 RCSB 
# 
