data_SI9
#

_chem_comp.id                                   SI9
_chem_comp.name                                 "[CuII(biot-bu-dpea)]2+"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H40 Cu N6 O2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2016-05-26
_chem_comp.pdbx_modified_date                   2016-07-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       588.267
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    SI9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       5K68
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
SI9  O3   O1   O   0  1  N  N  N  14.301  29.422   -8.237  ?  ?  ?  O3   SI9   1  
SI9  C9   C1   C   0  1  N  N  N  15.544  29.334   -8.509  ?  ?  ?  C9   SI9   2  
SI9  N1   N1   N   0  1  N  N  N  16.528  29.508   -7.609  ?  ?  ?  N1   SI9   3  
SI9  N2   N2   N   0  1  N  N  N  16.045  29.117   -9.733  ?  ?  ?  N2   SI9   4  
SI9  C10  C2   C   0  1  N  N  S  17.531  29.100   -9.715  ?  ?  ?  C10  SI9   5  
SI9  C8   C3   C   0  1  N  N  R  17.852  29.373   -8.172  ?  ?  ?  C8   SI9   6  
SI9  C7   C4   C   0  1  N  N  N  18.599  28.133   -7.615  ?  ?  ?  C7   SI9   7  
SI9  S1   S1   S   0  1  N  N  N  17.984  26.739   -8.619  ?  ?  ?  S1   SI9   8  
SI9  C6   C5   C   0  1  N  N  S  18.110  27.753  -10.127  ?  ?  ?  C6   SI9   9  
SI9  C5   C6   C   0  1  N  N  N  17.489  27.136  -11.385  ?  ?  ?  C5   SI9  10  
SI9  C4   C7   C   0  1  N  N  N  18.367  26.019  -11.965  ?  ?  ?  C4   SI9  11  
SI9  C3   C8   C   0  1  N  N  N  17.654  25.360  -13.201  ?  ?  ?  C3   SI9  12  
SI9  C2   C9   C   0  1  N  N  N  18.537  24.254  -13.819  ?  ?  ?  C2   SI9  13  
SI9  C1   C10  C   0  1  N  N  N  19.870  24.815  -14.391  ?  ?  ?  C1   SI9  14  
SI9  N6   N3   N   0  1  N  N  N  20.982  24.075  -14.117  ?  ?  ?  N6   SI9  15  
SI9  O1   O2   O   0  1  N  N  N  19.847  25.892  -15.066  ?  ?  ?  O1   SI9  16  
SI9  C28  C11  C   0  1  N  N  N  22.313  24.731  -14.517  ?  ?  ?  C28  SI9  17  
SI9  C27  C12  C   0  1  N  N  N  22.656  24.099  -15.861  ?  ?  ?  C27  SI9  18  
SI9  C12  C13  C   0  1  N  N  N  23.977  24.866  -16.285  ?  ?  ?  C12  SI9  19  
SI9  C11  C14  C   0  1  N  N  N  24.893  24.241  -17.386  ?  ?  ?  C11  SI9  20  
SI9  N3   N4   N   0  1  N  N  N  26.430  24.392  -17.111  ?  ?  ?  N3   SI9  21  
SI9  CU1  CU1  CU  0  0  N  N  N  27.097  23.922  -14.982  ?  ?  ?  CU1  SI9  22  
SI9  N5   N5   N   0  1  Y  N  N  27.311  25.991  -14.661  ?  ?  ?  N5   SI9  23  
SI9  N4   N6   N   0  1  Y  N  N  28.943  23.288  -15.805  ?  ?  ?  N4   SI9  24  
SI9  C26  C15  C   0  1  N  N  N  26.665  25.789  -17.661  ?  ?  ?  C26  SI9  25  
SI9  C25  C16  C   0  1  N  N  N  26.182  26.990  -16.792  ?  ?  ?  C25  SI9  26  
SI9  C24  C17  C   0  1  Y  N  N  26.924  27.086  -15.447  ?  ?  ?  C24  SI9  27  
SI9  C23  C18  C   0  1  Y  N  N  27.234  28.372  -15.012  ?  ?  ?  C23  SI9  28  
SI9  C22  C19  C   0  1  Y  N  N  27.929  28.366  -13.827  ?  ?  ?  C22  SI9  29  
SI9  C21  C20  C   0  1  Y  N  N  28.295  27.206  -13.128  ?  ?  ?  C21  SI9  30  
SI9  C20  C21  C   0  1  Y  N  N  27.981  26.016  -13.523  ?  ?  ?  C20  SI9  31  
SI9  C19  C22  C   0  1  N  N  N  27.044  23.570  -18.205  ?  ?  ?  C19  SI9  32  
SI9  C18  C23  C   0  1  N  N  N  27.577  22.231  -17.683  ?  ?  ?  C18  SI9  33  
SI9  C17  C24  C   0  1  Y  N  N  28.906  22.505  -16.977  ?  ?  ?  C17  SI9  34  
SI9  C16  C25  C   0  1  Y  N  N  30.070  22.008  -17.595  ?  ?  ?  C16  SI9  35  
SI9  C15  C26  C   0  1  Y  N  N  31.272  22.263  -16.937  ?  ?  ?  C15  SI9  36  
SI9  C14  C27  C   0  1  Y  N  N  31.269  23.064  -15.787  ?  ?  ?  C14  SI9  37  
SI9  C13  C28  C   0  1  Y  N  N  30.125  23.585  -15.121  ?  ?  ?  C13  SI9  38  
SI9  H1   H1   H   0  1  N  N  N  16.360  29.711   -6.644  ?  ?  ?  H1   SI9  39  
SI9  H2   H2   H   0  1  N  N  N  15.490  28.984  -10.554  ?  ?  ?  H2   SI9  40  
SI9  H3   H3   H   0  1  N  N  N  17.948  29.910  -10.331  ?  ?  ?  H3   SI9  41  
SI9  H4   H4   H   0  1  N  N  N  18.458  30.285   -8.060  ?  ?  ?  H4   SI9  42  
SI9  H5   H5   H   0  1  N  N  N  18.361  27.981   -6.552  ?  ?  ?  H5   SI9  43  
SI9  H6   H6   H   0  1  N  N  N  19.686  28.248   -7.735  ?  ?  ?  H6   SI9  44  
SI9  H7   H7   H   0  1  N  N  N  19.189  27.879  -10.302  ?  ?  ?  H7   SI9  45  
SI9  H8   H8   H   0  1  N  N  N  17.366  27.923  -12.144  ?  ?  ?  H8   SI9  46  
SI9  H9   H9   H   0  1  N  N  N  16.505  26.718  -11.128  ?  ?  ?  H9   SI9  47  
SI9  H10  H10  H   0  1  N  N  N  18.539  25.254  -11.194  ?  ?  ?  H10  SI9  48  
SI9  H11  H11  H   0  1  N  N  N  19.331  26.442  -12.284  ?  ?  ?  H11  SI9  49  
SI9  H12  H12  H   0  1  N  N  N  17.460  26.133  -13.960  ?  ?  ?  H12  SI9  50  
SI9  H13  H13  H   0  1  N  N  N  16.700  24.920  -12.874  ?  ?  ?  H13  SI9  51  
SI9  H14  H14  H   0  1  N  N  N  17.979  23.769  -14.633  ?  ?  ?  H14  SI9  52  
SI9  H15  H15  H   0  1  N  N  N  18.770  23.512  -13.042  ?  ?  ?  H15  SI9  53  
SI9  H16  H16  H   0  1  N  N  N  20.935  23.173  -13.688  ?  ?  ?  H16  SI9  54  
SI9  H17  H17  H   0  1  N  N  N  23.094  24.513  -13.773  ?  ?  ?  H17  SI9  55  
SI9  H18  H18  H   0  1  N  N  N  22.196  25.820  -14.617  ?  ?  ?  H18  SI9  56  
SI9  H19  H19  H   0  1  N  N  N  21.851  24.263  -16.593  ?  ?  ?  H19  SI9  57  
SI9  H20  H20  H   0  1  N  N  N  22.841  23.020  -15.755  ?  ?  ?  H20  SI9  58  
SI9  H21  H21  H   0  1  N  N  N  24.591  24.977  -15.379  ?  ?  ?  H21  SI9  59  
SI9  H22  H22  H   0  1  N  N  N  23.672  25.860  -16.645  ?  ?  ?  H22  SI9  60  
SI9  H23  H23  H   0  1  N  N  N  24.665  24.732  -18.343  ?  ?  ?  H23  SI9  61  
SI9  H24  H24  H   0  1  N  N  N  24.660  23.168  -17.459  ?  ?  ?  H24  SI9  62  
SI9  H25  H25  H   0  1  N  N  N  27.748  25.906  -17.814  ?  ?  ?  H25  SI9  63  
SI9  H26  H26  H   0  1  N  N  N  26.149  25.854  -18.630  ?  ?  ?  H26  SI9  64  
SI9  H27  H27  H   0  1  N  N  N  26.350  27.921  -17.354  ?  ?  ?  H27  SI9  65  
SI9  H28  H28  H   0  1  N  N  N  25.107  26.871  -16.593  ?  ?  ?  H28  SI9  66  
SI9  H29  H29  H   0  1  N  N  N  26.960  29.270  -15.545  ?  ?  ?  H29  SI9  67  
SI9  H30  H30  H   0  1  N  N  N  28.213  29.319  -13.405  ?  ?  ?  H30  SI9  68  
SI9  H31  H31  H   0  1  N  N  N  28.866  27.312  -12.217  ?  ?  ?  H31  SI9  69  
SI9  H32  H32  H   0  1  N  N  N  28.242  25.124  -12.973  ?  ?  ?  H32  SI9  70  
SI9  H33  H33  H   0  1  N  N  N  27.876  24.135  -18.650  ?  ?  ?  H33  SI9  71  
SI9  H34  H34  H   0  1  N  N  N  26.282  23.374  -18.973  ?  ?  ?  H34  SI9  72  
SI9  H35  H35  H   0  1  N  N  N  26.859  21.792  -16.974  ?  ?  ?  H35  SI9  73  
SI9  H36  H36  H   0  1  N  N  N  27.734  21.537  -18.522  ?  ?  ?  H36  SI9  74  
SI9  H37  H37  H   0  1  N  N  N  30.033  21.461  -18.525  ?  ?  ?  H37  SI9  75  
SI9  H38  H38  H   0  1  N  N  N  32.197  21.847  -17.310  ?  ?  ?  H38  SI9  76  
SI9  H39  H39  H   0  1  N  N  N  32.232  23.310  -15.364  ?  ?  ?  H39  SI9  77  
SI9  H40  H40  H   0  1  N  N  N  30.165  24.143  -14.197  ?  ?  ?  H40  SI9  78  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
SI9  C19  C18  SING  N  N   1  
SI9  C19  N3   SING  N  N   2  
SI9  C18  C17  SING  N  N   3  
SI9  C26  N3   SING  N  N   4  
SI9  C26  C25  SING  N  N   5  
SI9  C16  C17  DOUB  Y  N   6  
SI9  C16  C15  SING  Y  N   7  
SI9  C11  N3   SING  N  N   8  
SI9  C11  C12  SING  N  N   9  
SI9  N3   CU1  SING  N  N  10  
SI9  C17  N4   SING  Y  N  11  
SI9  C15  C14  DOUB  Y  N  12  
SI9  C25  C24  SING  N  N  13  
SI9  C12  C27  SING  N  N  14  
SI9  C27  C28  SING  N  N  15  
SI9  N4   C13  DOUB  Y  N  16  
SI9  N4   CU1  SING  N  N  17  
SI9  C14  C13  SING  Y  N  18  
SI9  C24  C23  DOUB  Y  N  19  
SI9  C24  N5   SING  Y  N  20  
SI9  O1   C1   DOUB  N  N  21  
SI9  C23  C22  SING  Y  N  22  
SI9  CU1  N5   SING  N  N  23  
SI9  N5   C20  DOUB  Y  N  24  
SI9  C28  N6   SING  N  N  25  
SI9  C1   N6   SING  N  N  26  
SI9  C1   C2   SING  N  N  27  
SI9  C22  C21  DOUB  Y  N  28  
SI9  C2   C3   SING  N  N  29  
SI9  C20  C21  SING  Y  N  30  
SI9  C3   C4   SING  N  N  31  
SI9  C4   C5   SING  N  N  32  
SI9  C5   C6   SING  N  N  33  
SI9  C6   C10  SING  N  N  34  
SI9  C6   S1   SING  N  N  35  
SI9  N2   C10  SING  N  N  36  
SI9  N2   C9   SING  N  N  37  
SI9  C10  C8   SING  N  N  38  
SI9  S1   C7   SING  N  N  39  
SI9  C9   O3   DOUB  N  N  40  
SI9  C9   N1   SING  N  N  41  
SI9  C8   C7   SING  N  N  42  
SI9  C8   N1   SING  N  N  43  
SI9  N1   H1   SING  N  N  44  
SI9  N2   H2   SING  N  N  45  
SI9  C10  H3   SING  N  N  46  
SI9  C8   H4   SING  N  N  47  
SI9  C7   H5   SING  N  N  48  
SI9  C7   H6   SING  N  N  49  
SI9  C6   H7   SING  N  N  50  
SI9  C5   H8   SING  N  N  51  
SI9  C5   H9   SING  N  N  52  
SI9  C4   H10  SING  N  N  53  
SI9  C4   H11  SING  N  N  54  
SI9  C3   H12  SING  N  N  55  
SI9  C3   H13  SING  N  N  56  
SI9  C2   H14  SING  N  N  57  
SI9  C2   H15  SING  N  N  58  
SI9  N6   H16  SING  N  N  59  
SI9  C28  H17  SING  N  N  60  
SI9  C28  H18  SING  N  N  61  
SI9  C27  H19  SING  N  N  62  
SI9  C27  H20  SING  N  N  63  
SI9  C12  H21  SING  N  N  64  
SI9  C12  H22  SING  N  N  65  
SI9  C11  H23  SING  N  N  66  
SI9  C11  H24  SING  N  N  67  
SI9  C26  H25  SING  N  N  68  
SI9  C26  H26  SING  N  N  69  
SI9  C25  H27  SING  N  N  70  
SI9  C25  H28  SING  N  N  71  
SI9  C23  H29  SING  N  N  72  
SI9  C22  H30  SING  N  N  73  
SI9  C21  H31  SING  N  N  74  
SI9  C20  H32  SING  N  N  75  
SI9  C19  H33  SING  N  N  76  
SI9  C19  H34  SING  N  N  77  
SI9  C18  H35  SING  N  N  78  
SI9  C18  H36  SING  N  N  79  
SI9  C16  H37  SING  N  N  80  
SI9  C15  H38  SING  N  N  81  
SI9  C14  H39  SING  N  N  82  
SI9  C13  H40  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
SI9  InChI             InChI                 1.03   "InChI=1S/C28H40N6O2S.Cu/c35-26(12-2-1-11-25-27-24(21-37-25)32-28(36)33-27)31-17-7-8-18-34(19-13-22-9-3-5-15-29-22)20-14-23-10-4-6-16-30-23;/h3-6,9-10,15-16,24-25,27H,1-2,7-8,11-14,17-21H2,(H,31,35)(H2,32,33,36);/t24-,25-,27-;/m0./s1"  
SI9  InChIKey          InChI                 1.03   QOBKFHSZBSMICN-PBQYMGKRSA-N  
SI9  SMILES_CANONICAL  CACTVS                3.385  "[Cu].O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)NCCCCN(CCc3ccccn3)CCc4ccccn4"  
SI9  SMILES            CACTVS                3.385  "[Cu].O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)NCCCCN(CCc3ccccn3)CCc4ccccn4"  
SI9  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.5  "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2[N]4=CC=CC=C41)CCCCNC(=O)CCCC[C@H]5[C@@H]6[C@H](CS5)NC(=O)N6"  
SI9  SMILES            "OpenEye OEToolkits"  2.0.5  "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2[N]4=CC=CC=C41)CCCCNC(=O)CCCCC5C6C(CS5)NC(=O)N6"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
SI9  "Create component"    2016-05-26  EBI   
SI9  "Other modification"  2016-06-02  RCSB  
SI9  "Initial release"     2016-07-20  RCSB  
##
