data_S39
# 
_chem_comp.id                                    S39 
_chem_comp.name                                  "(4S)-2-{2-[(1,3-benzothiazol-5-yl)amino]-2-oxoethyl}-6-chloro-N-(isoquinolin-4-yl)-1,2,3,4-tetrahydroisoquinoline-4-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C28 H22 Cl N5 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-22 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        528.025 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     S39 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GNN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S39 N1  N1  N  0 1 N N N N N N -20.312 4.767  27.193 3.437   -0.335 0.451  N1  S39 1  
S39 N3  N2  N  0 1 N N N N N N -20.186 8.712  29.776 -3.862  -0.136 1.754  N3  S39 2  
S39 C4  C1  C  0 1 N N N N N N -20.576 4.707  28.523 2.335   -0.119 1.195  C4  S39 3  
S39 C5  C2  C  0 1 Y N N N N N -19.041 4.771  26.566 3.740   -1.625 0.009  C5  S39 4  
S39 C6  C3  C  0 1 Y N N N N N -18.231 3.640  26.468 2.737   -2.508 -0.331 C6  S39 5  
S39 C7  C4  C  0 1 Y N N N N N -16.439 4.781  25.648 4.230   -4.194 -0.874 C7  S39 6  
S39 C8  C5  C  0 1 Y N N N N N -17.134 6.016  25.669 5.326   -3.375 -0.559 C8  S39 7  
S39 C10 C6  C  0 1 Y N N N N N -17.270 8.396  25.279 7.676   -2.988 -0.362 C10 S39 8  
S39 C13 C7  C  0 1 Y N N N N N -18.479 6.014  26.132 5.081   -2.053 -0.105 C13 S39 9  
S39 C15 C8  C  0 1 Y N N N N N -22.473 4.679  31.379 0.719   2.705  0.184  C15 S39 10 
S39 C17 C9  C  0 1 Y N N N N N -22.395 2.664  32.712 1.815   4.037  -1.487 C17 S39 11 
S39 C20 C10 C  0 1 Y N N N N N -22.242 1.928  31.564 3.043   3.572  -1.050 C20 S39 12 
S39 C21 C11 C  0 1 Y N N N N N -18.968 9.275  29.331 -4.870  -0.426 0.825  C21 S39 13 
S39 C22 C12 C  0 1 Y N N N N N -17.773 8.640  29.651 -4.540  -1.020 -0.392 C22 S39 14 
S39 C24 C13 C  0 1 Y N N N N N -18.965 10.419 28.536 -6.181  -0.128 1.124  C24 S39 15 
S39 C26 C14 C  0 1 Y N N N N N -16.574 10.253 28.353 -6.857  -1.016 -1.017 C26 S39 16 
S39 CL  CL1 CL 0 0 N N N N N N -22.102 0.196  31.677 4.502   4.115  -1.818 CL  S39 17 
S39 C16 C15 C  0 1 Y N N N N N -22.524 4.035  32.614 0.658   3.604  -0.871 C16 S39 18 
S39 C19 C16 C  0 1 Y N N N N N -22.180 2.529  30.322 3.105   2.675  -0.001 C19 S39 19 
S39 C18 C17 C  0 1 Y N N N N N -22.265 3.919  30.220 1.942   2.239  0.617  C18 S39 20 
S39 C3  C18 C  0 1 N N S N N N -22.061 4.615  28.884 2.058   1.254  1.751  C3  S39 21 
S39 O1  O1  O  0 1 N N N N N N -19.692 4.713  29.381 1.565   -1.030 1.418  O1  S39 22 
S39 C12 C19 C  0 1 Y N N N N N -19.182 7.245  26.138 6.161   -1.220 0.214  C12 S39 23 
S39 C11 C20 C  0 1 Y N N N N N -18.585 8.399  25.711 7.433   -1.690 0.083  C11 S39 24 
S39 C9  C21 C  0 1 Y N N N N N -16.550 7.237  25.256 6.650   -3.827 -0.676 C9  S39 25 
S39 N2  N3  N  0 1 Y N N N N N -16.963 3.628  26.030 3.007   -3.735 -0.752 N2  S39 26 
S39 C2  C22 C  0 1 N N N N N N -22.676 6.016  28.911 0.755   1.224  2.551  C2  S39 27 
S39 C14 C23 C  0 1 N N N N N N -22.673 6.176  31.322 -0.570  2.270  0.830  C14 S39 28 
S39 N   N4  N  0 1 N N N N N N -22.176 6.765  30.068 -0.365  1.047  1.613  N   S39 29 
S39 C1  C24 C  0 1 N N N N N N -22.531 8.181  29.997 -1.592  0.666  2.325  C1  S39 30 
S39 C   C25 C  0 1 N N N N N N -21.441 9.067  29.420 -2.645  0.256  1.327  C   S39 31 
S39 O   O2  O  0 1 N N N N N N -21.715 10.018 28.690 -2.397  0.280  0.140  O   S39 32 
S39 C25 C26 C  0 1 Y N N N N N -17.766 10.908 28.021 -7.204  -0.421 0.200  C25 S39 33 
S39 N4  N5  N  0 1 Y N N N N N -17.616 11.992 27.152 -8.532  -0.218 0.297  N4  S39 34 
S39 C27 C27 C  0 1 Y N N N N N -16.372 12.145 26.849 -9.265  -0.578 -0.687 C27 S39 35 
S39 S   S1  S  0 1 Y N N N N N -15.245 11.034 27.554 -8.335  -1.261 -1.944 S   S39 36 
S39 C23 C28 C  0 1 Y N N N N N -16.571 9.130  29.174 -5.525  -1.307 -1.307 C23 S39 37 
S39 H1  H1  H  0 1 N N N N N N -21.105 4.814  26.586 4.018   0.406  0.218  H1  S39 38 
S39 H2  H2  H  0 1 N N N N N N -20.110 7.962  30.433 -4.039  -0.218 2.704  H2  S39 39 
S39 H3  H3  H  0 1 N N N N N N -18.660 2.696  26.770 1.707   -2.192 -0.253 H3  S39 40 
S39 H4  H4  H  0 1 N N N N N N -15.417 4.781  25.298 4.394   -5.203 -1.221 H4  S39 41 
S39 H5  H5  H  0 1 N N N N N N -16.810 9.319  24.957 8.694   -3.335 -0.457 H5  S39 42 
S39 H6  H6  H  0 1 N N N N N N -22.414 2.179  33.677 1.762   4.737  -2.307 H6  S39 43 
S39 H7  H7  H  0 1 N N N N N N -17.784 7.759  30.276 -3.510  -1.254 -0.616 H7  S39 44 
S39 H8  H8  H  0 1 N N N N N N -19.893 10.927 28.319 -6.426  0.331  2.070  H8  S39 45 
S39 H9  H9  H  0 1 N N N N N N -22.667 4.619  33.511 -0.300  3.967  -1.212 H9  S39 46 
S39 H10 H10 H  0 1 N N N N N N -22.066 1.926  29.433 4.063   2.312  0.340  H10 S39 47 
S39 H11 H11 H  0 1 N N N N N N -22.570 4.029  28.105 2.876   1.551  2.407  H11 S39 48 
S39 H12 H12 H  0 1 N N N N N N -20.204 7.272  26.485 5.986   -0.212 0.560  H12 S39 49 
S39 H13 H13 H  0 1 N N N N N N -19.145 9.322  25.711 8.265   -1.047 0.329  H13 S39 50 
S39 H14 H14 H  0 1 N N N N N N -15.524 7.252  24.919 6.854   -4.830 -1.019 H14 S39 51 
S39 H15 H15 H  0 1 N N N N N N -22.406 6.550  27.988 0.777   0.394  3.256  H15 S39 52 
S39 H16 H16 H  0 1 N N N N N N -23.771 5.931  28.978 0.635   2.164  3.091  H16 S39 53 
S39 H17 H17 H  0 1 N N N N N N -22.136 6.636  32.165 -0.928  3.062  1.488  H17 S39 54 
S39 H18 H18 H  0 1 N N N N N N -23.748 6.392  31.411 -1.314  2.081  0.057  H18 S39 55 
S39 H20 H20 H  0 1 N N N N N N -22.758 8.531  31.015 -1.380  -0.169 2.993  H20 S39 56 
S39 H21 H21 H  0 1 N N N N N N -23.427 8.281  29.367 -1.954  1.514  2.907  H21 S39 57 
S39 H22 H22 H  0 1 N N N N N N -16.047 12.932 26.184 -10.339 -0.464 -0.719 H22 S39 58 
S39 H23 H23 H  0 1 N N N N N N -15.641 8.647  29.436 -5.267  -1.767 -2.250 H23 S39 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S39 C9  C10 DOUB Y N 1  
S39 C9  C8  SING Y N 2  
S39 C10 C11 SING Y N 3  
S39 C7  C8  DOUB Y N 4  
S39 C7  N2  SING Y N 5  
S39 C8  C13 SING Y N 6  
S39 C11 C12 DOUB Y N 7  
S39 N2  C6  DOUB Y N 8  
S39 C13 C12 SING Y N 9  
S39 C13 C5  DOUB Y N 10 
S39 C6  C5  SING Y N 11 
S39 C5  N1  SING N N 12 
S39 C27 N4  DOUB Y N 13 
S39 C27 S   SING Y N 14 
S39 N4  C25 SING Y N 15 
S39 N1  C4  SING N N 16 
S39 S   C26 SING Y N 17 
S39 C25 C26 DOUB Y N 18 
S39 C25 C24 SING Y N 19 
S39 C26 C23 SING Y N 20 
S39 C4  C3  SING N N 21 
S39 C4  O1  DOUB N N 22 
S39 C24 C21 DOUB Y N 23 
S39 O   C   DOUB N N 24 
S39 C3  C2  SING N N 25 
S39 C3  C18 SING N N 26 
S39 C2  N   SING N N 27 
S39 C23 C22 DOUB Y N 28 
S39 C21 C22 SING Y N 29 
S39 C21 N3  SING N N 30 
S39 C   N3  SING N N 31 
S39 C   C1  SING N N 32 
S39 C1  N   SING N N 33 
S39 N   C14 SING N N 34 
S39 C18 C19 DOUB Y N 35 
S39 C18 C15 SING Y N 36 
S39 C19 C20 SING Y N 37 
S39 C14 C15 SING N N 38 
S39 C15 C16 DOUB Y N 39 
S39 C20 CL  SING N N 40 
S39 C20 C17 DOUB Y N 41 
S39 C16 C17 SING Y N 42 
S39 N1  H1  SING N N 43 
S39 N3  H2  SING N N 44 
S39 C6  H3  SING N N 45 
S39 C7  H4  SING N N 46 
S39 C10 H5  SING N N 47 
S39 C17 H6  SING N N 48 
S39 C22 H7  SING N N 49 
S39 C24 H8  SING N N 50 
S39 C16 H9  SING N N 51 
S39 C19 H10 SING N N 52 
S39 C3  H11 SING N N 53 
S39 C12 H12 SING N N 54 
S39 C11 H13 SING N N 55 
S39 C9  H14 SING N N 56 
S39 C2  H15 SING N N 57 
S39 C2  H16 SING N N 58 
S39 C14 H17 SING N N 59 
S39 C14 H18 SING N N 60 
S39 C1  H20 SING N N 61 
S39 C1  H21 SING N N 62 
S39 C27 H22 SING N N 63 
S39 C23 H23 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S39 SMILES           ACDLabs              12.01 "Clc1ccc2CN(CC(C(=O)Nc3cncc4ccccc43)c2c1)CC(=O)Nc1cc2ncsc2cc1"                                                                                                                                       
S39 InChI            InChI                1.06  "InChI=1S/C28H22ClN5O2S/c29-19-6-5-18-13-34(15-27(35)32-20-7-8-26-24(10-20)31-16-37-26)14-23(22(18)9-19)28(36)33-25-12-30-11-17-3-1-2-4-21(17)25/h1-12,16,23H,13-15H2,(H,32,35)(H,33,36)/t23-/m1/s1" 
S39 InChIKey         InChI                1.06  QLTJDOSMDPTNNG-HSZRJFAPSA-N                                                                                                                                                                          
S39 SMILES_CANONICAL CACTVS               3.385 "Clc1ccc2CN(C[C@@H](C(=O)Nc3cncc4ccccc34)c2c1)CC(=O)Nc5ccc6scnc6c5"                                                                                                                                  
S39 SMILES           CACTVS               3.385 "Clc1ccc2CN(C[CH](C(=O)Nc3cncc4ccccc34)c2c1)CC(=O)Nc5ccc6scnc6c5"                                                                                                                                    
S39 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cncc2NC(=O)[C@@H]3CN(Cc4c3cc(cc4)Cl)CC(=O)Nc5ccc6c(c5)ncs6"                                                                                                                              
S39 SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc2c(c1)cncc2NC(=O)C3CN(Cc4c3cc(cc4)Cl)CC(=O)Nc5ccc6c(c5)ncs6"                                                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
S39 "SYSTEMATIC NAME" ACDLabs              12.01 "(4S)-2-{2-[(1,3-benzothiazol-5-yl)amino]-2-oxoethyl}-6-chloro-N-(isoquinolin-4-yl)-1,2,3,4-tetrahydroisoquinoline-4-carboxamide"                 
S39 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(4~{S})-2-[2-(1,3-benzothiazol-5-ylamino)-2-oxidanylidene-ethyl]-6-chloranyl-~{N}-isoquinolin-4-yl-3,4-dihydro-1~{H}-isoquinoline-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S39 "Create component" 2023-08-22 RCSB 
S39 "Initial release"  2023-11-08 RCSB 
# 
