data_RZ9
# 
_chem_comp.id                                    RZ9 
_chem_comp.name                                  "5-[(3S)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]-1,3,4-oxadiazol-2(3H)-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H14 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-23 
_chem_comp.pdbx_modified_date                    2022-07-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        286.289 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RZ9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5SOU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RZ9 C02  C1  C 0 1 N N N -47.320 -33.465 0.298  -5.139 -0.456 -0.306 C02  RZ9 1  
RZ9 C05  C2  C 0 1 N N N -45.580 -31.985 0.381  -3.022 0.068  -0.117 C05  RZ9 2  
RZ9 C06  C3  C 0 1 N N S -44.564 -30.856 0.851  -1.712 0.788  -0.305 C06  RZ9 3  
RZ9 C07  C4  C 0 1 N N N -44.824 -29.598 0.172  -1.632 1.967  0.669  C07  RZ9 4  
RZ9 C08  C5  C 0 1 N N N -45.950 -28.821 0.650  -0.273 2.656  0.513  C08  RZ9 5  
RZ9 C09  C6  C 0 1 N N N -46.327 -29.123 2.094  0.841  1.638  0.767  C09  RZ9 6  
RZ9 C11  C7  C 0 1 Y N N -45.220 -29.411 4.403  1.789  -0.342 -0.073 C11  RZ9 7  
RZ9 C12  C8  C 0 1 Y N N -46.463 -29.214 5.055  3.109  0.116  -0.200 C12  RZ9 8  
RZ9 C13  C9  C 0 1 Y N N -47.813 -29.015 4.676  3.737  1.413  -0.444 C13  RZ9 9  
RZ9 C14  C10 C 0 1 Y N N -48.552 -28.869 5.834  5.064  1.207  -0.457 C14  RZ9 10 
RZ9 C16  C11 C 0 1 Y N N -46.465 -29.176 6.422  4.160  -0.812 -0.079 C16  RZ9 11 
RZ9 C18  C12 C 0 1 Y N N -44.168 -29.527 6.450  2.605  -2.474 0.262  C18  RZ9 12 
RZ9 C20  C13 C 0 1 N N N -44.557 -30.764 2.396  -0.555 -0.176 -0.027 C20  RZ9 13 
RZ9 N03  N1  N 0 1 N N N -46.530 -33.638 -0.901 -4.558 -1.331 0.543  N03  RZ9 14 
RZ9 N04  N2  N 0 1 N N N -45.469 -32.740 -0.848 -3.207 -0.964 0.638  N04  RZ9 15 
RZ9 N10  N3  N 0 1 N N N -45.130 -29.475 2.962  0.722  0.530  -0.189 N10  RZ9 16 
RZ9 N15  N4  N 0 1 Y N N -47.731 -28.969 6.866  5.329  -0.121 -0.240 N15  RZ9 17 
RZ9 N17  N5  N 0 1 Y N N -45.300 -29.337 7.096  3.858  -2.089 0.150  N17  RZ9 18 
RZ9 N19  N6  N 0 1 Y N N -44.119 -29.567 5.127  1.589  -1.637 0.155  N19  RZ9 19 
RZ9 O01  O1  O 0 1 N N N -48.300 -34.070 0.578  -6.308 -0.446 -0.643 O01  RZ9 20 
RZ9 O21  O2  O 0 1 N N N -46.718 -32.449 1.076  -4.188 0.405  -0.703 O21  RZ9 21 
RZ9 H061 H1  H 0 0 N N N -43.563 -31.199 0.551  -1.641 1.155  -1.329 H061 RZ9 22 
RZ9 H072 H2  H 0 0 N N N -45.001 -29.823 -0.890 -2.428 2.677  0.446  H072 RZ9 23 
RZ9 H071 H3  H 0 0 N N N -43.923 -28.974 0.269  -1.742 1.604  1.691  H071 RZ9 24 
RZ9 H082 H4  H 0 0 N N N -45.695 -27.754 0.573  -0.180 3.053  -0.498 H082 RZ9 25 
RZ9 H081 H5  H 0 0 N N N -46.819 -29.037 0.011  -0.194 3.470  1.234  H081 RZ9 26 
RZ9 H091 H6  H 0 0 N N N -46.820 -28.236 2.520  1.810  2.122  0.643  H091 RZ9 27 
RZ9 H092 H7  H 0 0 N N N -47.027 -29.971 2.103  0.756  1.252  1.783  H092 RZ9 28 
RZ9 H131 H8  H 0 0 N N N -48.195 -28.983 3.666  3.231  2.356  -0.587 H131 RZ9 29 
RZ9 H141 H9  H 0 0 N N N -49.618 -28.702 5.887  5.810  1.971  -0.616 H141 RZ9 30 
RZ9 H181 H10 H 0 0 N N N -43.256 -29.654 7.014  2.399  -3.517 0.448  H181 RZ9 31 
RZ9 H202 H11 H 0 0 N N N -45.148 -31.603 2.791  -0.634 -0.554 0.992  H202 RZ9 32 
RZ9 H201 H12 H 0 0 N N N -43.516 -30.855 2.739  -0.601 -1.010 -0.728 H201 RZ9 33 
RZ9 H031 H13 H 0 0 N N N -46.714 -34.288 -1.638 -4.990 -2.070 0.998  H031 RZ9 34 
RZ9 H151 H14 H 0 0 N N N -48.001 -28.902 7.826  6.216  -0.512 -0.206 H151 RZ9 35 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RZ9 N03 N04  SING N N 1  
RZ9 N03 C02  SING N N 2  
RZ9 N04 C05  DOUB N N 3  
RZ9 C07 C08  SING N N 4  
RZ9 C07 C06  SING N N 5  
RZ9 C02 O01  DOUB N N 6  
RZ9 C02 O21  SING N N 7  
RZ9 C05 C06  SING N N 8  
RZ9 C05 O21  SING N N 9  
RZ9 C08 C09  SING N N 10 
RZ9 C06 C20  SING N N 11 
RZ9 C09 N10  SING N N 12 
RZ9 C20 N10  SING N N 13 
RZ9 N10 C11  SING N N 14 
RZ9 C11 C12  DOUB Y N 15 
RZ9 C11 N19  SING Y N 16 
RZ9 C13 C12  SING Y N 17 
RZ9 C13 C14  DOUB Y N 18 
RZ9 C12 C16  SING Y N 19 
RZ9 N19 C18  DOUB Y N 20 
RZ9 C14 N15  SING Y N 21 
RZ9 C16 N15  SING Y N 22 
RZ9 C16 N17  DOUB Y N 23 
RZ9 C18 N17  SING Y N 24 
RZ9 C06 H061 SING N N 25 
RZ9 C07 H072 SING N N 26 
RZ9 C07 H071 SING N N 27 
RZ9 C08 H082 SING N N 28 
RZ9 C08 H081 SING N N 29 
RZ9 C09 H091 SING N N 30 
RZ9 C09 H092 SING N N 31 
RZ9 C13 H131 SING N N 32 
RZ9 C14 H141 SING N N 33 
RZ9 C18 H181 SING N N 34 
RZ9 C20 H202 SING N N 35 
RZ9 C20 H201 SING N N 36 
RZ9 N03 H031 SING N N 37 
RZ9 N15 H151 SING N N 38 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RZ9 SMILES           ACDLabs              12.01 "O=C1NN=C(O1)C1CN(CCC1)c1ncnc2[NH]ccc21"                                                                                                   
RZ9 InChI            InChI                1.06  "InChI=1S/C13H14N6O2/c20-13-18-17-12(21-13)8-2-1-5-19(6-8)11-9-3-4-14-10(9)15-7-16-11/h3-4,7-8H,1-2,5-6H2,(H,18,20)(H,14,15,16)/t8-/m0/s1" 
RZ9 InChIKey         InChI                1.06  FSJZPCQWTVULBE-QMMMGPOBSA-N                                                                                                                
RZ9 SMILES_CANONICAL CACTVS               3.385 "O=C1NN=C(O1)[C@H]2CCCN(C2)c3ncnc4[nH]ccc34"                                                                                               
RZ9 SMILES           CACTVS               3.385 "O=C1NN=C(O1)[CH]2CCCN(C2)c3ncnc4[nH]ccc34"                                                                                                
RZ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)N3CCC[C@@H](C3)C4=NNC(=O)O4"                                                                                            
RZ9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1c[nH]c2c1c(ncn2)N3CCCC(C3)C4=NNC(=O)O4"                                                                                                 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RZ9 "SYSTEMATIC NAME" ACDLabs              12.01 "5-[(3S)-1-(7H-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]-1,3,4-oxadiazol-2(3H)-one"         
RZ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[(3~{S})-1-(7~{H}-pyrrolo[2,3-d]pyrimidin-4-yl)piperidin-3-yl]-3~{H}-1,3,4-oxadiazol-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RZ9 "Create component" 2022-06-23 RCSB 
RZ9 "Initial release"  2022-07-13 RCSB 
# 
