data_RU9
# 
_chem_comp.id                                    RU9 
_chem_comp.name                                  "2-(4-(3-HYDROXYPHENOXY)PHENYL)-1H-BENZO[D]IMIDAZOLE-5-CARBOXAMIDE" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H15 N3 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-11-28 
_chem_comp.pdbx_modified_date                    2014-09-05 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        345.351 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RU9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4A9S 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RU9 C1   C1   C 0 1 N N N 34.294 -33.443 12.597 -7.230 -0.220 0.655  C1   RU9 1  
RU9 N1   N1   N 0 1 N N N 34.815 -32.480 13.550 -8.261 0.617  0.423  N1   RU9 2  
RU9 O1   O1   O 0 1 N N N 40.602 -30.775 2.874  4.120  -1.103 -0.853 O1   RU9 3  
RU9 C2   C2   C 0 1 Y N N 34.955 -33.593 11.229 -5.866 0.156  0.238  C2   RU9 4  
RU9 C3   C3   C 0 1 Y N N 35.643 -32.600 10.703 -4.800 -0.711 0.479  C3   RU9 5  
RU9 N3   N3   N 0 1 Y N N 37.097 -31.920 8.546  -2.287 -0.962 0.172  N3   RU9 6  
RU9 C4   C4   C 0 1 Y N N 36.319 -32.773 9.342  -3.524 -0.351 0.085  C4   RU9 7  
RU9 N4   N4   N 0 1 Y N N 36.961 -33.798 7.419  -1.988 0.970  -0.821 N4   RU9 8  
RU9 C5   C5   C 0 1 Y N N 37.475 -32.622 7.360  -1.379 -0.113 -0.398 C5   RU9 9  
RU9 C6   C6   C 0 1 Y N N 36.208 -33.914 8.706  -3.307 0.885  -0.555 C6   RU9 10 
RU9 C7   C7   C 0 1 Y N N 35.410 -35.065 9.319  -4.389 1.744  -0.789 C7   RU9 11 
RU9 C8   C8   C 0 1 Y N N 34.830 -34.916 10.487 -5.644 1.382  -0.404 C8   RU9 12 
RU9 C9   C9   C 0 1 Y N N 38.314 -32.101 6.196  0.071  -0.374 -0.518 C9   RU9 13 
RU9 C10  C10  C 0 1 Y N N 38.169 -32.781 4.839  0.904  0.571  -1.121 C10  RU9 14 
RU9 C11  C11  C 0 1 Y N N 38.881 -32.367 3.817  2.255  0.324  -1.231 C11  RU9 15 
RU9 C12  C12  C 0 1 Y N N 39.860 -31.207 3.982  2.789  -0.863 -0.743 C12  RU9 16 
RU9 C13  C13  C 0 1 Y N N 39.989 -30.619 5.156  1.962  -1.805 -0.142 C13  RU9 17 
RU9 C14  C14  C 0 1 Y N N 39.160 -31.101 6.348  0.611  -1.563 -0.024 C14  RU9 18 
RU9 C15  C15  C 0 1 Y N N 41.219 -31.871 2.255  4.970  -0.328 -0.129 C15  RU9 19 
RU9 C16  C16  C 0 1 Y N N 42.589 -32.350 2.733  4.467  0.586  0.787  C16  RU9 20 
RU9 C17  C17  C 0 1 Y N N 43.169 -33.381 2.156  5.330  1.374  1.523  C17  RU9 21 
RU9 C18  C18  C 0 1 Y N N 42.471 -34.101 1.004  6.696  1.255  1.350  C18  RU9 22 
RU9 C19  C19  C 0 1 Y N N 41.291 -33.689 0.591  7.204  0.343  0.436  C19  RU9 23 
RU9 C20  C20  C 0 1 Y N N 40.619 -32.492 1.260  6.340  -0.454 -0.299 C20  RU9 24 
RU9 OAB  OAB  O 0 1 N N N 33.443 -34.203 12.925 -7.424 -1.283 1.212  OAB  RU9 25 
RU9 OAC  OAC  O 0 1 N N N 40.650 -34.355 -0.459 8.547  0.227  0.266  OAC  RU9 26 
RU9 H11N H11N H 0 0 N N N 34.457 -32.456 14.483 -8.106 1.467  -0.019 H11N RU9 27 
RU9 H12N H12N H 0 0 N N N 35.532 -31.840 13.273 -9.158 0.370  0.696  H12N RU9 28 
RU9 H3   H3   H 0 1 N N N 35.730 -31.663 11.233 -4.970 -1.658 0.970  H3   RU9 29 
RU9 H8   H8   H 0 1 N N N 34.266 -35.729 10.920 -6.474 2.047  -0.592 H8   RU9 30 
RU9 HA   HA   H 0 1 N N N 37.346 -30.978 8.771  -2.098 -1.830 0.563  HA   RU9 31 
RU9 H7   H7   H 0 1 N N N 35.323 -36.003 8.790  -4.228 2.693  -1.280 H7   RU9 32 
RU9 H10  H10  H 0 1 N N N 37.480 -33.604 4.719  0.491  1.493  -1.501 H10  RU9 33 
RU9 H14  H14  H 0 1 N N N 39.267 -30.624 7.311  -0.030 -2.294 0.447  H14  RU9 34 
RU9 H11  H11  H 0 1 N N N 38.774 -32.848 2.856  2.901  1.053  -1.697 H11  RU9 35 
RU9 H13  H13  H 0 1 N N N 40.680 -29.797 5.276  2.380  -2.727 0.235  H13  RU9 36 
RU9 H16  H16  H 0 1 N N N 43.083 -31.841 3.547  3.400  0.682  0.924  H16  RU9 37 
RU9 H20  H20  H 0 1 N N N 39.652 -32.155 0.917  6.733  -1.168 -1.008 H20  RU9 38 
RU9 H17  H17  H 0 1 N N N 44.137 -33.717 2.497  4.937  2.085  2.235  H17  RU9 39 
RU9 H18  H18  H 0 1 N N N 42.945 -34.947 0.529  7.369  1.873  1.926  H18  RU9 40 
RU9 HAC  HAC  H 0 1 N N N 39.815 -33.939 -0.636 8.962  -0.425 0.848  HAC  RU9 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RU9 C1  N1   SING N N 1  
RU9 C1  C2   SING N N 2  
RU9 C1  OAB  DOUB N N 3  
RU9 O1  C12  SING N N 4  
RU9 O1  C15  SING N N 5  
RU9 C2  C3   SING Y N 6  
RU9 C2  C8   DOUB Y N 7  
RU9 C3  C4   DOUB Y N 8  
RU9 N3  C4   SING Y N 9  
RU9 N3  C5   SING Y N 10 
RU9 C4  C6   SING Y N 11 
RU9 N4  C5   DOUB Y N 12 
RU9 N4  C6   SING Y N 13 
RU9 C5  C9   SING N N 14 
RU9 C6  C7   DOUB Y N 15 
RU9 C7  C8   SING Y N 16 
RU9 C9  C10  SING Y N 17 
RU9 C9  C14  DOUB Y N 18 
RU9 C10 C11  DOUB Y N 19 
RU9 C11 C12  SING Y N 20 
RU9 C12 C13  DOUB Y N 21 
RU9 C13 C14  SING Y N 22 
RU9 C15 C16  SING Y N 23 
RU9 C15 C20  DOUB Y N 24 
RU9 C16 C17  DOUB Y N 25 
RU9 C17 C18  SING Y N 26 
RU9 C18 C19  DOUB Y N 27 
RU9 C19 C20  SING Y N 28 
RU9 C19 OAC  SING N N 29 
RU9 N1  H11N SING N N 30 
RU9 N1  H12N SING N N 31 
RU9 C3  H3   SING N N 32 
RU9 C8  H8   SING N N 33 
RU9 N3  HA   SING N N 34 
RU9 C7  H7   SING N N 35 
RU9 C10 H10  SING N N 36 
RU9 C14 H14  SING N N 37 
RU9 C11 H11  SING N N 38 
RU9 C13 H13  SING N N 39 
RU9 C16 H16  SING N N 40 
RU9 C20 H20  SING N N 41 
RU9 C17 H17  SING N N 42 
RU9 C18 H18  SING N N 43 
RU9 OAC HAC  SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RU9 SMILES           ACDLabs              12.01 "O=C(c3ccc4nc(c2ccc(Oc1cccc(O)c1)cc2)nc4c3)N"                                                                                         
RU9 InChI            InChI                1.03  "InChI=1S/C20H15N3O3/c21-19(25)13-6-9-17-18(10-13)23-20(22-17)12-4-7-15(8-5-12)26-16-3-1-2-14(24)11-16/h1-11,24H,(H2,21,25)(H,22,23)" 
RU9 InChIKey         InChI                1.03  PMCFOCQQFLSWEU-UHFFFAOYSA-N                                                                                                           
RU9 SMILES_CANONICAL CACTVS               3.385 "NC(=O)c1ccc2nc([nH]c2c1)c3ccc(Oc4cccc(O)c4)cc3"                                                                                      
RU9 SMILES           CACTVS               3.385 "NC(=O)c1ccc2nc([nH]c2c1)c3ccc(Oc4cccc(O)c4)cc3"                                                                                      
RU9 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "c1cc(cc(c1)Oc2ccc(cc2)c3[nH]c4cc(ccc4n3)C(=O)N)O"                                                                                    
RU9 SMILES           "OpenEye OEToolkits" 1.9.2 "c1cc(cc(c1)Oc2ccc(cc2)c3[nH]c4cc(ccc4n3)C(=O)N)O"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RU9 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[4-(3-hydroxyphenoxy)phenyl]-1H-benzimidazole-6-carboxamide"  
RU9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "2-[4-(3-oxidanylphenoxy)phenyl]-3H-benzimidazole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RU9 "Create component"  2011-11-28 EBI  
RU9 "Initial release"   2012-10-05 RCSB 
RU9 "Modify descriptor" 2014-09-05 RCSB 
# 
