data_RS9
# 
_chem_comp.id                                    RS9 
_chem_comp.name                                  "(1R,2S)-4-hydroxy-1-{[2-(hydroxymethyl)-1H-benzimidazole-5-carbonyl]amino}-2,3-dihydro-1H-indene-2-carboxylic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H17 N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-23 
_chem_comp.pdbx_modified_date                    2022-07-01 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        367.355 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     RS9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5SSN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
RS9 C18  C1  C 0 1 N N N -42.698 -28.441 1.093  4.519  -0.721 0.472  C18  RS9 1  
RS9 C15  C2  C 0 1 N N N -43.155 -30.329 2.713  3.262  -2.812 -0.125 C15  RS9 2  
RS9 C14  C3  C 0 1 N N S -43.560 -28.941 2.231  3.155  -1.443 0.495  C14  RS9 3  
RS9 C13  C4  C 0 1 N N R -44.930 -29.012 1.612  2.276  -0.516 -0.371 C13  RS9 4  
RS9 C11  C5  C 0 1 N N N -47.302 -28.962 2.527  -0.119 -0.195 -0.689 C11  RS9 5  
RS9 C10  C6  C 0 1 Y N N -48.122 -29.023 3.800  -1.503 -0.174 -0.175 C10  RS9 6  
RS9 C20  C7  C 0 1 Y N N -43.377 -26.386 -0.464 4.963  1.877  0.437  C20  RS9 7  
RS9 C19  C8  C 0 1 Y N N -43.646 -27.464 0.371  4.191  0.738  0.240  C19  RS9 8  
RS9 C02  C9  C 0 1 N N N -53.081 -29.703 7.099  -7.471 0.514  -0.446 C02  RS9 9  
RS9 C03  C10 C 0 1 Y N N -51.738 -29.528 6.398  -6.001 0.301  -0.198 C03  RS9 10 
RS9 C05  C11 C 0 1 Y N N -50.230 -29.318 4.878  -3.859 0.159  -0.536 C05  RS9 11 
RS9 C06  C12 C 0 1 Y N N -49.627 -29.223 6.106  -4.092 -0.144 0.818  C06  RS9 12 
RS9 C08  C13 C 0 1 Y N N -48.253 -29.039 6.205  -3.028 -0.452 1.659  C08  RS9 13 
RS9 C09  C14 C 0 1 Y N N -47.504 -28.945 5.047  -1.753 -0.468 1.172  C09  RS9 14 
RS9 C22  C15 C 0 1 Y N N -44.442 -25.669 -0.987 4.442  3.128  0.147  C22  RS9 15 
RS9 C23  C16 C 0 1 Y N N -45.758 -25.998 -0.692 3.153  3.241  -0.338 C23  RS9 16 
RS9 C24  C17 C 0 1 Y N N -46.025 -27.065 0.140  2.386  2.109  -0.532 C24  RS9 17 
RS9 C25  C18 C 0 1 Y N N -44.963 -27.794 0.676  2.903  0.856  -0.245 C25  RS9 18 
RS9 C27  C19 C 0 1 Y N N -49.484 -29.217 3.706  -2.555 0.142  -1.029 C27  RS9 19 
RS9 N04  N1  N 0 1 Y N N -51.530 -29.506 5.101  -5.068 0.420  -1.097 N04  RS9 20 
RS9 N07  N2  N 0 1 Y N N -50.595 -29.359 7.013  -5.455 -0.046 1.000  N07  RS9 21 
RS9 N12  N3  N 0 1 N N N -45.863 -29.006 2.700  0.902  -0.495 0.138  N12  RS9 22 
RS9 O01  O1  O 0 1 N N N -54.023 -30.203 6.190  -8.196 0.297  0.766  O01  RS9 23 
RS9 O16  O2  O 0 1 N N N -43.406 -30.673 3.896  4.075  -3.732 0.417  O16  RS9 24 
RS9 O17  O3  O 0 1 N N N -42.571 -31.132 1.934  2.617  -3.081 -1.111 O17  RS9 25 
RS9 O21  O4  O 0 1 N N N -42.058 -26.031 -0.779 6.230  1.763  0.914  O21  RS9 26 
RS9 O26  O5  O 0 1 N N N -47.821 -28.954 1.465  0.100  0.060  -1.857 O26  RS9 27 
RS9 H182 H1  H 0 0 N N N -42.395 -29.265 0.431  5.029  -0.847 1.428  H182 RS9 28 
RS9 H181 H2  H 0 0 N N N -41.803 -27.924 1.468  5.137  -1.106 -0.339 H181 RS9 29 
RS9 H141 H3  H 0 0 N N N -43.548 -28.226 3.067  2.768  -1.509 1.512  H141 RS9 30 
RS9 H131 H4  H 0 0 N N N -45.025 -29.933 1.018  2.288  -0.845 -1.410 H131 RS9 31 
RS9 H022 H5  H 0 0 N N N -53.423 -28.731 7.483  -7.637 1.535  -0.790 H022 RS9 32 
RS9 H021 H6  H 0 0 N N N -52.968 -30.409 7.935  -7.817 -0.186 -1.206 H021 RS9 33 
RS9 H081 H7  H 0 0 N N N -47.778 -28.970 7.172  -3.211 -0.684 2.697  H081 RS9 34 
RS9 H091 H8  H 0 0 N N N -46.434 -28.810 5.109  -0.931 -0.708 1.830  H091 RS9 35 
RS9 H221 H9  H 0 0 N N N -44.243 -24.833 -1.641 5.042  4.013  0.299  H221 RS9 36 
RS9 H231 H10 H 0 0 N N N -46.569 -25.421 -1.112 2.745  4.215  -0.564 H231 RS9 37 
RS9 H241 H11 H 0 0 N N N -47.045 -27.333 0.374  1.379  2.201  -0.911 H241 RS9 38 
RS9 H271 H12 H 0 0 N N N -49.964 -29.289 2.741  -2.363 0.373  -2.066 H271 RS9 39 
RS9 H071 H14 H 0 0 N N N -50.468 -29.336 8.005  -5.936 -0.196 1.829  H071 RS9 40 
RS9 H121 H15 H 0 0 N N N -45.501 -29.034 3.632  0.728  -0.698 1.070  H121 RS9 41 
RS9 H011 H16 H 0 0 N N N -54.859 -30.312 6.628  -9.151 0.417  0.681  H011 RS9 42 
RS9 H2   H17 H 0 1 N N N -43.094 -31.558 4.042  4.111  -4.596 -0.016 H2   RS9 43 
RS9 H211 H18 H 0 0 N N N -41.457 -26.622 -0.340 6.902  1.666  0.225  H211 RS9 44 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
RS9 C22 C23  DOUB Y N 1  
RS9 C22 C20  SING Y N 2  
RS9 O21 C20  SING N N 3  
RS9 C23 C24  SING Y N 4  
RS9 C20 C19  DOUB Y N 5  
RS9 C24 C25  DOUB Y N 6  
RS9 C19 C25  SING Y N 7  
RS9 C19 C18  SING N N 8  
RS9 C25 C13  SING N N 9  
RS9 C18 C14  SING N N 10 
RS9 O26 C11  DOUB N N 11 
RS9 C13 C14  SING N N 12 
RS9 C13 N12  SING N N 13 
RS9 O17 C15  DOUB N N 14 
RS9 C14 C15  SING N N 15 
RS9 C11 N12  SING N N 16 
RS9 C11 C10  SING N N 17 
RS9 C15 O16  SING N N 18 
RS9 C27 C10  DOUB Y N 19 
RS9 C27 C05  SING Y N 20 
RS9 C10 C09  SING Y N 21 
RS9 C05 N04  SING Y N 22 
RS9 C05 C06  DOUB Y N 23 
RS9 C09 C08  DOUB Y N 24 
RS9 N04 C03  DOUB Y N 25 
RS9 C06 C08  SING Y N 26 
RS9 C06 N07  SING Y N 27 
RS9 O01 C02  SING N N 28 
RS9 C03 N07  SING Y N 29 
RS9 C03 C02  SING N N 30 
RS9 C18 H182 SING N N 31 
RS9 C18 H181 SING N N 32 
RS9 C14 H141 SING N N 33 
RS9 C13 H131 SING N N 34 
RS9 C02 H022 SING N N 35 
RS9 C02 H021 SING N N 36 
RS9 C08 H081 SING N N 37 
RS9 C09 H091 SING N N 38 
RS9 C22 H221 SING N N 39 
RS9 C23 H231 SING N N 40 
RS9 C24 H241 SING N N 41 
RS9 C27 H271 SING N N 42 
RS9 N07 H071 SING N N 43 
RS9 N12 H121 SING N N 44 
RS9 O01 H011 SING N N 45 
RS9 O16 H2   SING N N 46 
RS9 O21 H211 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
RS9 SMILES           ACDLabs              12.01 "O=C(O)C1Cc2c(cccc2O)C1NC(=O)c1cc2nc(CO)[NH]c2cc1"                                                                                                                            
RS9 InChI            InChI                1.06  "InChI=1S/C19H17N3O5/c23-8-16-20-13-5-4-9(6-14(13)21-16)18(25)22-17-10-2-1-3-15(24)11(10)7-12(17)19(26)27/h1-6,12,17,23-24H,7-8H2,(H,20,21)(H,22,25)(H,26,27)/t12-,17-/m0/s1" 
RS9 InChIKey         InChI                1.06  CXHYRAPCOSLYMC-SJCJKPOMSA-N                                                                                                                                                   
RS9 SMILES_CANONICAL CACTVS               3.385 "OCc1[nH]c2ccc(cc2n1)C(=O)N[C@@H]3[C@H](Cc4c(O)cccc34)C(O)=O"                                                                                                                 
RS9 SMILES           CACTVS               3.385 "OCc1[nH]c2ccc(cc2n1)C(=O)N[CH]3[CH](Cc4c(O)cccc34)C(O)=O"                                                                                                                    
RS9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)O)C[C@@H]([C@H]2NC(=O)c3ccc4c(c3)nc([nH]4)CO)C(=O)O"                                                                                                             
RS9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2c(c(c1)O)CC(C2NC(=O)c3ccc4c(c3)nc([nH]4)CO)C(=O)O"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
RS9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S)-4-hydroxy-1-{[2-(hydroxymethyl)-1H-benzimidazole-5-carbonyl]amino}-2,3-dihydro-1H-indene-2-carboxylic acid"               
RS9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S})-1-[[2-(hydroxymethyl)-1~{H}-benzimidazol-5-yl]carbonylamino]-4-oxidanyl-2,3-dihydro-1~{H}-indene-2-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
RS9 "Create component" 2022-06-23 RCSB 
RS9 "Initial release"  2022-07-06 RCSB 
# 
