data_QD9
# 
_chem_comp.id                                    QD9 
_chem_comp.name                                  "N-[(3-chlorophenyl)methyl]-N-[5-(dimethylamino)pyridin-2-yl]-2-(isoquinolin-4-yl)acetamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H23 Cl N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-18 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        430.929 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QD9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GI7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QD9 N1  N1  N  0 1 Y N N N N N -23.221 3.786 28.218 2.134  1.173  -1.157 N1  QD9 1  
QD9 N3  N2  N  0 1 Y N N N N N -16.888 3.826 25.730 -4.739 -0.993 2.282  N3  QD9 2  
QD9 C4  C1  C  0 1 Y N N N N N -23.612 6.142 27.904 0.958  1.782  0.794  C4  QD9 3  
QD9 C5  C2  C  0 1 Y N N N N N -22.852 5.069 28.348 1.115  0.986  -0.334 C5  QD9 4  
QD9 C6  C3  C  0 1 Y N N N N N -24.406 3.527 27.639 3.034  2.113  -0.944 C6  QD9 5  
QD9 C7  C4  C  0 1 N N N N N N -21.719 5.779 30.420 0.516  -1.086 -1.554 C7  QD9 6  
QD9 C8  C5  C  0 1 Y N N N N N -21.647 4.698 31.472 1.314  -2.157 -0.856 C8  QD9 7  
QD9 C10 C6  C  0 1 Y N N N N N -21.048 3.972 33.694 1.422  -4.297 0.213  C10 QD9 8  
QD9 C13 C7  C  0 1 Y N N N N N -22.017 3.391 31.166 2.668  -1.982 -0.644 C13 QD9 9  
QD9 C15 C8  C  0 1 N N N N N N -20.363 4.611 27.045 -1.987 -1.140 -0.225 C15 QD9 10 
QD9 C17 C9  C  0 1 Y N N N N N -18.138 3.733 26.213 -3.589 -1.269 1.682  C17 QD9 11 
QD9 C20 C10 C  0 1 Y N N N N N -16.668 7.520 25.339 -6.452 1.039  -0.210 C20 QD9 12 
QD9 C21 C11 C  0 1 Y N N N N N -17.439 8.630 25.534 -6.207 1.519  -1.461 C21 QD9 13 
QD9 C22 C12 C  0 1 Y N N N N N -18.731 8.515 26.029 -5.007 1.244  -2.115 C22 QD9 14 
QD9 C24 C13 C  0 1 Y N N N N N -18.498 6.102 26.135 -4.259 -0.023 -0.234 C24 QD9 15 
QD9 O   O1  O  0 1 N N N N N N -19.387 5.183 29.147 -1.303 0.890  0.764  O   QD9 16 
QD9 C14 C14 C  0 1 N N N N N N -20.420 5.026 28.504 -1.011 -0.018 0.015  C14 QD9 17 
QD9 C16 C15 C  0 1 Y N N N N N -18.987 4.801 26.444 -3.303 -0.811 0.431  C16 QD9 18 
QD9 C23 C16 C  0 1 Y N N N N N -19.257 7.288 26.325 -4.042 0.488  -1.522 C23 QD9 19 
QD9 C19 C17 C  0 1 Y N N N N N -17.176 6.231 25.626 -5.481 0.256  0.432  C19 QD9 20 
QD9 C18 C18 C  0 1 Y N N N N N -16.425 5.041 25.452 -5.677 -0.266 1.721  C18 QD9 21 
QD9 N2  N3  N  0 1 N N N N N N -21.650 5.265 29.045 0.188  -0.023 -0.602 N2  QD9 22 
QD9 C3  C19 C  0 1 Y N N N N N -24.832 5.857 27.322 1.882  2.778  1.051  C3  QD9 23 
QD9 C2  C20 C  0 1 Y N N N N N -25.252 4.533 27.175 2.942  2.946  0.162  C2  QD9 24 
QD9 N   N4  N  0 1 N N N N N N -26.470 4.221 26.575 3.901  3.941  0.381  N   QD9 25 
QD9 C1  C21 C  0 1 N N N N N N -27.539 5.203 26.506 3.794  4.816  1.552  C1  QD9 26 
QD9 C   C22 C  0 1 N N N N N N -26.900 2.839 26.414 5.011  4.109  -0.560 C   QD9 27 
QD9 C12 C23 C  0 1 Y N N N N N -21.830 2.391 32.102 3.401  -2.965 -0.003 C12 QD9 28 
QD9 CL  CL1 CL 0 0 N N N N N N -22.064 0.729 31.621 5.102  -2.746 0.265  CL  QD9 29 
QD9 C11 C24 C  0 1 Y N N N N N -21.402 2.668 33.381 2.777  -4.123 0.426  C11 QD9 30 
QD9 C9  C25 C  0 1 Y N N N N N -21.151 4.973 32.740 0.690  -3.312 -0.423 C9  QD9 31 
QD9 H1  H1  H  0 1 N N N N N N -23.264 7.159 28.009 0.124  1.624  1.462  H1  QD9 32 
QD9 H2  H2  H  0 1 N N N N N N -24.715 2.498 27.529 3.853  2.235  -1.638 H2  QD9 33 
QD9 H3  H3  H  0 1 N N N N N N -20.879 6.472 30.575 1.104  -0.672 -2.374 H3  QD9 34 
QD9 H4  H4  H  0 1 N N N N N N -22.669 6.321 30.542 -0.404 -1.518 -1.949 H4  QD9 35 
QD9 H5  H5  H  0 1 N N N N N N -20.691 4.209 34.685 0.935  -5.201 0.548  H5  QD9 36 
QD9 H6  H6  H  0 1 N N N N N N -22.448 3.160 30.203 3.155  -1.078 -0.979 H6  QD9 37 
QD9 H7  H7  H  0 1 N N N N N N -21.083 5.218 26.477 -2.137 -1.268 -1.297 H7  QD9 38 
QD9 H8  H8  H  0 1 N N N N N N -20.638 3.549 26.969 -1.591 -2.063 0.199  H8  QD9 39 
QD9 H9  H9  H  0 1 N N N N N N -18.510 2.745 26.439 -2.859 -1.874 2.199  H9  QD9 40 
QD9 H10 H10 H  0 1 N N N N N N -15.661 7.627 24.962 -7.387 1.261  0.284  H10 QD9 41 
QD9 H11 H11 H  0 1 N N N N N N -17.040 9.606 25.301 -6.955 2.122  -1.954 H11 QD9 42 
QD9 H12 H12 H  0 1 N N N N N N -19.326 9.403 26.182 -4.840 1.638  -3.106 H12 QD9 43 
QD9 H13 H13 H  0 1 N N N N N N -20.264 7.219 26.709 -3.117 0.282  -2.040 H13 QD9 44 
QD9 H14 H14 H  0 1 N N N N N N -15.418 5.126 25.071 -6.597 -0.069 2.250  H14 QD9 45 
QD9 H15 H15 H  0 1 N N N N N N -25.465 6.662 26.979 1.785  3.412  1.921  H15 QD9 46 
QD9 H16 H16 H  0 1 N N N N N N -27.120 6.212 26.638 4.331  4.370  2.389  H16 QD9 47 
QD9 H17 H17 H  0 1 N N N N N N -28.035 5.137 25.526 4.227  5.789  1.319  H17 QD9 48 
QD9 H18 H18 H  0 1 N N N N N N -28.272 5.004 27.302 2.744  4.940  1.818  H18 QD9 49 
QD9 H19 H19 H  0 1 N N N N N N -26.027 2.173 26.480 4.723  4.813  -1.340 H19 QD9 50 
QD9 H20 H20 H  0 1 N N N N N N -27.617 2.584 27.208 5.883  4.491  -0.028 H20 QD9 51 
QD9 H21 H21 H  0 1 N N N N N N -27.381 2.717 25.432 5.254  3.147  -1.010 H21 QD9 52 
QD9 H22 H22 H  0 1 N N N N N N -21.343 1.887 34.124 3.348  -4.891 0.927  H22 QD9 53 
QD9 H23 H23 H  0 1 N N N N N N -20.842 5.978 32.986 -0.370 -3.447 -0.585 H23 QD9 54 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QD9 C20 C21 DOUB Y N 1  
QD9 C20 C19 SING Y N 2  
QD9 C18 C19 DOUB Y N 3  
QD9 C18 N3  SING Y N 4  
QD9 C21 C22 SING Y N 5  
QD9 C19 C24 SING Y N 6  
QD9 N3  C17 DOUB Y N 7  
QD9 C22 C23 DOUB Y N 8  
QD9 C24 C23 SING Y N 9  
QD9 C24 C16 DOUB Y N 10 
QD9 C17 C16 SING Y N 11 
QD9 C   N   SING N N 12 
QD9 C16 C15 SING N N 13 
QD9 C1  N   SING N N 14 
QD9 N   C2  SING N N 15 
QD9 C15 C14 SING N N 16 
QD9 C2  C3  DOUB Y N 17 
QD9 C2  C6  SING Y N 18 
QD9 C3  C4  SING Y N 19 
QD9 C6  N1  DOUB Y N 20 
QD9 C4  C5  DOUB Y N 21 
QD9 N1  C5  SING Y N 22 
QD9 C5  N2  SING N N 23 
QD9 C14 N2  SING N N 24 
QD9 C14 O   DOUB N N 25 
QD9 N2  C7  SING N N 26 
QD9 C7  C8  SING N N 27 
QD9 C13 C8  DOUB Y N 28 
QD9 C13 C12 SING Y N 29 
QD9 C8  C9  SING Y N 30 
QD9 CL  C12 SING N N 31 
QD9 C12 C11 DOUB Y N 32 
QD9 C9  C10 DOUB Y N 33 
QD9 C11 C10 SING Y N 34 
QD9 C4  H1  SING N N 35 
QD9 C6  H2  SING N N 36 
QD9 C7  H3  SING N N 37 
QD9 C7  H4  SING N N 38 
QD9 C10 H5  SING N N 39 
QD9 C13 H6  SING N N 40 
QD9 C15 H7  SING N N 41 
QD9 C15 H8  SING N N 42 
QD9 C17 H9  SING N N 43 
QD9 C20 H10 SING N N 44 
QD9 C21 H11 SING N N 45 
QD9 C22 H12 SING N N 46 
QD9 C23 H13 SING N N 47 
QD9 C18 H14 SING N N 48 
QD9 C3  H15 SING N N 49 
QD9 C1  H16 SING N N 50 
QD9 C1  H17 SING N N 51 
QD9 C1  H18 SING N N 52 
QD9 C   H19 SING N N 53 
QD9 C   H20 SING N N 54 
QD9 C   H21 SING N N 55 
QD9 C11 H22 SING N N 56 
QD9 C9  H23 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QD9 SMILES           ACDLabs              12.01 "CN(C)c1cnc(cc1)N(Cc1cccc(Cl)c1)C(=O)Cc1cncc2ccccc21"                                                                                              
QD9 InChI            InChI                1.06  "InChI=1S/C25H23ClN4O/c1-29(2)22-10-11-24(28-16-22)30(17-18-6-5-8-21(26)12-18)25(31)13-20-15-27-14-19-7-3-4-9-23(19)20/h3-12,14-16H,13,17H2,1-2H3" 
QD9 InChIKey         InChI                1.06  UJFDJUBIAPUKQV-UHFFFAOYSA-N                                                                                                                        
QD9 SMILES_CANONICAL CACTVS               3.385 "CN(C)c1ccc(nc1)N(Cc2cccc(Cl)c2)C(=O)Cc3cncc4ccccc34"                                                                                              
QD9 SMILES           CACTVS               3.385 "CN(C)c1ccc(nc1)N(Cc2cccc(Cl)c2)C(=O)Cc3cncc4ccccc34"                                                                                              
QD9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(nc1)N(Cc2cccc(c2)Cl)C(=O)Cc3cncc4c3cccc4"                                                                                              
QD9 SMILES           "OpenEye OEToolkits" 2.0.7 "CN(C)c1ccc(nc1)N(Cc2cccc(c2)Cl)C(=O)Cc3cncc4c3cccc4"                                                                                              
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
QD9 "SYSTEMATIC NAME" ACDLabs              12.01 "N-[(3-chlorophenyl)methyl]-N-[5-(dimethylamino)pyridin-2-yl]-2-(isoquinolin-4-yl)acetamide"       
QD9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(3-chlorophenyl)methyl]-~{N}-[5-(dimethylamino)pyridin-2-yl]-2-isoquinolin-4-yl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QD9 "Create component" 2023-08-18 RCSB 
QD9 "Initial release"  2023-11-08 RCSB 
# 
