data_OK9
# 
_chem_comp.id                                    OK9 
_chem_comp.name                                  "N-{(1Z)-1-[5-(morpholin-4-yl)thiophen-2-yl]-3-oxoprop-1-en-2-yl}thiophene-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H16 N2 O3 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-17 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        348.440 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OK9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GFW 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OK9 N1  N1  N 0 1 N N N N N N 9.587  3.073  23.027 -3.251 0.306  0.466  N1  OK9 1  
OK9 C4  C1  C 0 1 Y N N N N N 4.760  1.192  20.525 2.929  -2.526 1.077  C4  OK9 2  
OK9 C5  C2  C 0 1 Y N N N N N 3.827  2.195  20.212 2.609  -3.804 0.685  C5  OK9 3  
OK9 C6  C3  C 0 1 Y N N N N N 3.800  2.495  18.898 1.859  -3.888 -0.421 C6  OK9 4  
OK9 C7  C4  C 0 1 N N N N N N 9.013  -1.706 21.025 1.221  2.993  -0.169 C7  OK9 5  
OK9 C8  C5  C 0 1 Y N N N N N 9.445  -0.495 21.645 -0.081 2.503  0.037  C8  OK9 6  
OK9 C10 C6  C 0 1 Y N N N N N 10.793 0.924  22.923 -2.346 2.570  0.460  C10 OK9 7  
OK9 C13 C7  C 0 1 N N N N N N 8.559  5.284  22.889 -5.483 -0.386 -0.262 C13 OK9 8  
OK9 C15 C8  C 0 1 N N N N N N 10.421 3.527  24.150 -2.766 -1.069 0.278  C15 OK9 9  
OK9 O1  O1  O 0 1 N N N N N N 7.125  -0.336 18.184 3.232  0.311  1.363  O1  OK9 10 
OK9 C2  C9  C 0 1 N N N N N N 6.498  -0.249 19.234 2.582  -0.118 0.428  C2  OK9 11 
OK9 C3  C10 C 0 1 Y N N N N N 5.440  0.758  19.402 2.411  -1.563 0.257  C3  OK9 12 
OK9 S   S1  S 0 1 Y N N N N N 4.906  1.566  17.998 1.508  -2.337 -1.039 S   OK9 13 
OK9 N   N2  N 0 1 N N N N N N 6.769  -1.013 20.337 2.020  0.736  -0.451 N   OK9 14 
OK9 C1  C11 C 0 1 N N N N N N 7.791  -1.974 20.410 2.270  2.114  -0.348 C1  OK9 15 
OK9 C   C12 C 0 1 N N N N N N 7.499  -3.253 19.844 3.584  2.597  -0.427 C   OK9 16 
OK9 O   O2  O 0 1 N N N N N N 6.469  -3.560 19.281 4.498  1.834  -0.675 O   OK9 17 
OK9 S1  S2  S 0 1 Y N N N N N 8.535  0.983  21.659 -0.542 0.807  0.001  S1  OK9 18 
OK9 C11 C13 C 0 1 Y N N N N N 9.740  1.774  22.636 -2.218 1.218  0.340  C11 OK9 19 
OK9 C9  C14 C 0 1 Y N N N N N 10.620 -0.353 22.355 -1.185 3.275  0.302  C9  OK9 20 
OK9 C14 C15 C 0 1 N N N N N N 10.581 5.030  24.094 -3.927 -2.046 0.484  C14 OK9 21 
OK9 O2  O3  O 0 1 N N N N N N 9.311  5.692  24.047 -4.986 -1.718 -0.418 O2  OK9 22 
OK9 C12 C16 C 0 1 N N N N N N 8.310  3.794  22.889 -4.339 0.608  -0.476 C12 OK9 23 
OK9 H1  H1  H 0 1 N N N N N N 4.926  0.807  21.520 3.526  -2.304 1.949  H1  OK9 24 
OK9 H2  H2  H 0 1 N N N N N N 3.198  2.675  20.947 2.939  -4.677 1.229  H2  OK9 25 
OK9 H3  H3  H 0 1 N N N N N N 3.150  3.241  18.465 1.521  -4.814 -0.862 H3  OK9 26 
OK9 H4  H4  H 0 1 N N N N N N 9.724  -2.519 21.033 1.400  4.058  -0.186 H4  OK9 27 
OK9 H5  H5  H 0 1 N N N N N N 11.650 1.208  23.515 -3.292 3.048  0.669  H5  OK9 28 
OK9 H6  H6  H 0 1 N N N N N N 9.123  5.552  21.983 -6.267 -0.201 -0.997 H6  OK9 29 
OK9 H7  H7  H 0 1 N N N N N N 7.592  5.808  22.888 -5.888 -0.264 0.742  H7  OK9 30 
OK9 H8  H8  H 0 1 N N N N N N 9.941  3.246  25.099 -2.372 -1.181 -0.732 H8  OK9 31 
OK9 H9  H9  H 0 1 N N N N N N 11.411 3.052  24.085 -1.979 -1.280 1.002  H9  OK9 32 
OK9 H10 H10 H 0 1 N N N N N N 6.199  -0.878 21.148 1.444  0.399  -1.154 H10 OK9 33 
OK9 H11 H11 H 0 1 N N N N N N 8.262  -4.013 19.924 3.785  3.646  -0.266 H11 OK9 34 
OK9 H12 H12 H 0 1 N N N N N N 11.341 -1.149 22.465 -1.141 4.351  0.377  H12 OK9 35 
OK9 H13 H13 H 0 1 N N N N N N 11.156 5.295  23.194 -3.585 -3.063 0.290  H13 OK9 36 
OK9 H14 H14 H 0 1 N N N N N N 11.126 5.365  24.989 -4.286 -1.973 1.511  H14 OK9 37 
OK9 H15 H15 H 0 1 N N N N N N 7.651  3.534  23.731 -4.700 1.622  -0.302 H15 OK9 38 
OK9 H16 H16 H 0 1 N N N N N N 7.828  3.505  21.944 -3.969 0.523  -1.498 H16 OK9 39 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OK9 S   C6  SING Y N 1  
OK9 S   C3  SING Y N 2  
OK9 O1  C2  DOUB N N 3  
OK9 C6  C5  DOUB Y N 4  
OK9 C2  C3  SING N N 5  
OK9 C2  N   SING N N 6  
OK9 O   C   DOUB N N 7  
OK9 C3  C4  DOUB Y N 8  
OK9 C   C1  SING N N 9  
OK9 C5  C4  SING Y N 10 
OK9 N   C1  SING N N 11 
OK9 C1  C7  DOUB N Z 12 
OK9 C7  C8  SING N N 13 
OK9 C8  S1  SING Y N 14 
OK9 C8  C9  DOUB Y N 15 
OK9 S1  C11 SING Y N 16 
OK9 C9  C10 SING Y N 17 
OK9 C11 C10 DOUB Y N 18 
OK9 C11 N1  SING N N 19 
OK9 C13 C12 SING N N 20 
OK9 C13 O2  SING N N 21 
OK9 C12 N1  SING N N 22 
OK9 N1  C15 SING N N 23 
OK9 O2  C14 SING N N 24 
OK9 C14 C15 SING N N 25 
OK9 C4  H1  SING N N 26 
OK9 C5  H2  SING N N 27 
OK9 C6  H3  SING N N 28 
OK9 C7  H4  SING N N 29 
OK9 C10 H5  SING N N 30 
OK9 C13 H6  SING N N 31 
OK9 C13 H7  SING N N 32 
OK9 C15 H8  SING N N 33 
OK9 C15 H9  SING N N 34 
OK9 N   H10 SING N N 35 
OK9 C   H11 SING N N 36 
OK9 C9  H12 SING N N 37 
OK9 C14 H13 SING N N 38 
OK9 C14 H14 SING N N 39 
OK9 C12 H15 SING N N 40 
OK9 C12 H16 SING N N 41 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OK9 SMILES           ACDLabs              12.01 "O=C\C(NC(=O)c1cccs1)=C\c1ccc(s1)N1CCOCC1"                                                                                       
OK9 InChI            InChI                1.06  "InChI=1S/C16H16N2O3S2/c19-11-12(17-16(20)14-2-1-9-22-14)10-13-3-4-15(23-13)18-5-7-21-8-6-18/h1-4,9-11H,5-8H2,(H,17,20)/b12-10-" 
OK9 InChIKey         InChI                1.06  KZHJLIYVOMIHCX-BENRWUELSA-N                                                                                                      
OK9 SMILES_CANONICAL CACTVS               3.385 "O=CC(/NC(=O)c1sccc1)=C/c2sc(cc2)N3CCOCC3"                                                                                       
OK9 SMILES           CACTVS               3.385 "O=CC(NC(=O)c1sccc1)=Cc2sc(cc2)N3CCOCC3"                                                                                         
OK9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)C(=O)N/C(=C\c2ccc(s2)N3CCOCC3)/C=O"                                                                                    
OK9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(sc1)C(=O)NC(=Cc2ccc(s2)N3CCOCC3)C=O"                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OK9 "SYSTEMATIC NAME" ACDLabs              12.01 "N-{(1Z)-1-[5-(morpholin-4-yl)thiophen-2-yl]-3-oxoprop-1-en-2-yl}thiophene-2-carboxamide"               
OK9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(~{Z})-1-(5-morpholin-4-ylthiophen-2-yl)-3-oxidanylidene-prop-1-en-2-yl]thiophene-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OK9 "Create component" 2023-08-17 RCSB 
OK9 "Initial release"  2023-11-08 RCSB 
OK9 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            OK9 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
