data_OD9
# 
_chem_comp.id                                    OD9 
_chem_comp.name                                  "(1M)-N-({4-[(3,4-dihydroxyphenyl)methyl]phenyl}methyl)-3',4,4',5-tetrahydroxy[1,1'-biphenyl]-2-sulfonamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H23 N O8 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-27 
_chem_comp.pdbx_modified_date                    2023-04-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        509.528 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     OD9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5SN2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
OD9 C11 C1  C 0 1 Y N N 22.957 -42.571 29.003 3.734  2.719  0.584  C11 OD9 1  
OD9 C10 C2  C 0 1 Y N N 21.855 -43.399 29.174 3.320  1.402  0.566  C10 OD9 2  
OD9 C21 C3  C 0 1 Y N N 20.321 -45.846 31.630 2.745  -1.411 -1.486 C21 OD9 3  
OD9 C2  C4  C 0 1 Y N N 12.884 -39.937 28.909 -6.136 0.688  -1.158 C2  OD9 4  
OD9 C20 C5  C 0 1 Y N N 19.128 -46.361 32.099 2.341  -2.730 -1.503 C20 OD9 5  
OD9 C22 C6  C 0 1 Y N N 17.961 -39.524 27.596 -1.413 0.016  -1.522 C22 OD9 6  
OD9 C12 C7  C 0 1 Y N N 23.928 -42.520 29.985 4.688  3.161  -0.319 C12 OD9 7  
OD9 C13 C8  C 0 1 Y N N 23.801 -43.310 31.136 5.235  2.277  -1.245 C13 OD9 8  
OD9 C3  C9  C 0 1 Y N N 13.689 -38.930 28.384 -5.781 -0.561 -0.682 C3  OD9 9  
OD9 C18 C10 C 0 1 Y N N 17.933 -44.616 30.964 3.281  -3.051 0.691  C18 OD9 10 
OD9 C5  C11 C 0 1 Y N N 16.070 -39.039 29.001 -3.449 -1.188 -1.154 C5  OD9 11 
OD9 C1  C12 C 0 1 Y N N 11.954 -40.588 28.116 -6.951 1.512  -0.399 C1  OD9 12 
OD9 C19 C13 C 0 1 Y N N 17.926 -45.781 31.736 2.606  -3.553 -0.419 C19 OD9 13 
OD9 C17 C14 C 0 1 Y N N 19.133 -44.122 30.471 3.683  -1.727 0.715  C17 OD9 14 
OD9 C8  C15 C 0 1 Y N N 18.350 -40.561 28.416 -0.805 -0.701 -0.509 C8  OD9 15 
OD9 C7  C16 C 0 1 Y N N 17.555 -40.861 29.508 -1.520 -1.662 0.182  C7  OD9 16 
OD9 C6  C17 C 0 1 Y N N 16.442 -40.097 29.807 -2.841 -1.906 -0.141 C6  OD9 17 
OD9 C4  C18 C 0 1 N N N 14.772 -38.304 29.232 -4.890 -1.454 -1.506 C4  OD9 18 
OD9 C14 C19 C 0 1 Y N N 22.681 -44.107 31.306 4.828  0.955  -1.264 C14 OD9 19 
OD9 C24 C20 C 0 1 Y N N 13.536 -38.580 27.049 -6.242 -0.993 0.548  C24 OD9 20 
OD9 C25 C21 C 0 1 Y N N 12.595 -39.206 26.253 -7.061 -0.177 1.307  C25 OD9 21 
OD9 C9  C22 C 0 1 N N N 19.674 -41.248 28.197 0.636  -0.436 -0.157 C9  OD9 22 
OD9 C23 C23 C 0 1 Y N N 16.842 -38.770 27.887 -2.736 -0.223 -1.841 C23 OD9 23 
OD9 C15 C24 C 0 1 Y N N 21.649 -44.135 30.362 3.861  0.514  -0.361 C15 OD9 24 
OD9 C16 C25 C 0 1 Y N N 20.349 -44.735 30.791 3.421  -0.903 -0.378 C16 OD9 25 
OD9 O6  O1  O 0 1 N N N 20.338 -44.971 27.769 2.534  -0.438 2.158  O6  OD9 26 
OD9 O5  O2  O 0 1 N N N 16.760 -46.427 32.006 2.206  -4.852 -0.439 O5  OD9 27 
OD9 O1  O3  O 0 1 N N N 11.258 -41.627 28.640 -7.301 2.740  -0.865 O1  OD9 28 
OD9 O2  O4  O 0 1 N N N 24.992 -41.694 29.798 5.089  4.460  -0.302 O2  OD9 29 
OD9 O4  O5  O 0 1 N N N 16.784 -43.897 30.833 3.540  -3.860 1.753  O4  OD9 30 
OD9 O3  O6  O 0 1 N N N 24.771 -43.281 32.093 6.170  2.713  -2.132 O3  OD9 31 
OD9 O7  O7  O 0 1 N N N 21.533 -43.135 26.623 1.864  1.929  2.601  O7  OD9 32 
OD9 S   S1  S 0 1 N N N 20.806 -43.618 27.758 2.108  0.844  1.717  S   OD9 33 
OD9 N   N1  N 0 1 N N N 19.510 -42.677 27.906 0.704  0.605  0.872  N   OD9 34 
OD9 C   C26 C 0 1 Y N N 11.789 -40.207 26.781 -7.411 1.080  0.841  C   OD9 35 
OD9 O   O8  O 0 1 N N N 10.807 -40.756 26.024 -8.211 1.885  1.590  O   OD9 36 
OD9 H10 H1  H 0 1 N N N 23.054 -41.972 28.110 3.310  3.407  1.301  H10 OD9 37 
OD9 H18 H2  H 0 1 N N N 21.250 -46.314 31.920 2.541  -0.773 -2.333 H18 OD9 38 
OD9 H2  H3  H 0 1 N N N 12.986 -40.214 29.948 -5.774 1.022  -2.119 H2  OD9 39 
OD9 H17 H4  H 0 1 N N N 19.134 -47.221 32.752 1.817  -3.122 -2.362 H17 OD9 40 
OD9 H19 H5  H 0 1 N N N 18.540 -39.298 26.713 -0.854 0.767  -2.062 H19 OD9 41 
OD9 H14 H6  H 0 1 N N N 19.128 -43.252 29.831 4.207  -1.336 1.574  H14 OD9 42 
OD9 H6  H7  H 0 1 N N N 17.807 -41.703 30.135 -1.045 -2.223 0.974  H6  OD9 43 
OD9 H5  H8  H 0 1 N N N 15.855 -40.331 30.683 -3.398 -2.660 0.396  H5  OD9 44 
OD9 H3  H9  H 0 1 N N N 14.893 -37.247 28.953 -5.128 -2.497 -1.298 H3  OD9 45 
OD9 H4  H10 H 0 1 N N N 14.494 -38.373 30.294 -5.049 -1.249 -2.565 H4  OD9 46 
OD9 H13 H11 H 0 1 N N N 22.602 -44.723 32.190 5.251  0.268  -1.982 H13 OD9 47 
OD9 H21 H12 H 0 1 N N N 14.161 -37.807 26.626 -5.963 -1.969 0.916  H21 OD9 48 
OD9 H22 H13 H 0 1 N N N 12.486 -38.916 25.218 -7.420 -0.517 2.267  H22 OD9 49 
OD9 H8  H14 H 0 1 N N N 20.187 -40.769 27.349 1.092  -1.350 0.221  H8  OD9 50 
OD9 H7  H15 H 0 1 N N N 20.286 -41.138 29.105 1.172  -0.103 -1.046 H7  OD9 51 
OD9 H20 H16 H 0 1 N N N 16.565 -37.956 27.233 -3.211 0.337  -2.633 H20 OD9 52 
OD9 H16 H17 H 0 1 N N N 16.938 -47.193 32.539 1.319  -4.997 -0.081 H16 OD9 53 
OD9 H1  H18 H 0 1 N N N 11.497 -41.740 29.553 -8.116 2.746  -1.386 H1  OD9 54 
OD9 H11 H19 H 0 1 N N N 25.577 -41.757 30.544 5.844  4.631  0.278  H11 OD9 55 
OD9 H15 H20 H 0 1 N N N 16.063 -44.378 31.222 4.386  -4.325 1.696  H15 OD9 56 
OD9 H12 H21 H 0 1 N N N 24.535 -43.868 32.802 7.080  2.634  -1.814 H12 OD9 57 
OD9 H9  H22 H 0 1 N N N 18.957 -43.061 28.645 -0.074 1.154  1.058  H9  OD9 58 
OD9 H   H23 H 0 1 N N N 10.837 -40.387 25.149 -9.156 1.769  1.421  H   OD9 59 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
OD9 O   C   SING N N 1  
OD9 C   C1  DOUB Y N 2  
OD9 O1  C1  SING N N 3  
OD9 C1  C2  SING Y N 4  
OD9 C2  C3  DOUB Y N 5  
OD9 C3  C4  SING N N 6  
OD9 C4  C5  SING N N 7  
OD9 C5  C6  DOUB Y N 8  
OD9 C6  C7  SING Y N 9  
OD9 C7  C8  DOUB Y N 10 
OD9 C8  C9  SING N N 11 
OD9 C9  N   SING N N 12 
OD9 N   S   SING N N 13 
OD9 C10 S   SING N N 14 
OD9 C10 C11 DOUB Y N 15 
OD9 C11 C12 SING Y N 16 
OD9 O2  C12 SING N N 17 
OD9 C12 C13 DOUB Y N 18 
OD9 O3  C13 SING N N 19 
OD9 C13 C14 SING Y N 20 
OD9 C14 C15 DOUB Y N 21 
OD9 C15 C10 SING Y N 22 
OD9 C16 C15 SING N N 23 
OD9 C16 C17 DOUB Y N 24 
OD9 C17 C18 SING Y N 25 
OD9 O4  C18 SING N N 26 
OD9 C18 C19 DOUB Y N 27 
OD9 O5  C19 SING N N 28 
OD9 C19 C20 SING Y N 29 
OD9 C20 C21 DOUB Y N 30 
OD9 C21 C16 SING Y N 31 
OD9 O6  S   DOUB N N 32 
OD9 S   O7  DOUB N N 33 
OD9 C22 C8  SING Y N 34 
OD9 C23 C22 DOUB Y N 35 
OD9 C5  C23 SING Y N 36 
OD9 C24 C3  SING Y N 37 
OD9 C25 C24 DOUB Y N 38 
OD9 C   C25 SING Y N 39 
OD9 C11 H10 SING N N 40 
OD9 C21 H18 SING N N 41 
OD9 C2  H2  SING N N 42 
OD9 C20 H17 SING N N 43 
OD9 C22 H19 SING N N 44 
OD9 C17 H14 SING N N 45 
OD9 C7  H6  SING N N 46 
OD9 C6  H5  SING N N 47 
OD9 C4  H3  SING N N 48 
OD9 C4  H4  SING N N 49 
OD9 C14 H13 SING N N 50 
OD9 C24 H21 SING N N 51 
OD9 C25 H22 SING N N 52 
OD9 C9  H8  SING N N 53 
OD9 C9  H7  SING N N 54 
OD9 C23 H20 SING N N 55 
OD9 O5  H16 SING N N 56 
OD9 O1  H1  SING N N 57 
OD9 O2  H11 SING N N 58 
OD9 O4  H15 SING N N 59 
OD9 O3  H12 SING N N 60 
OD9 N   H9  SING N N 61 
OD9 O   H   SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
OD9 SMILES           ACDLabs              12.01 "O=S(=O)(NCc1ccc(Cc2ccc(O)c(O)c2)cc1)c1cc(O)c(O)cc1c1ccc(O)c(O)c1"                                                                                             
OD9 InChI            InChI                1.03  "InChI=1S/C26H23NO8S/c28-20-7-5-17(10-22(20)30)9-15-1-3-16(4-2-15)14-27-36(34,35)26-13-25(33)24(32)12-19(26)18-6-8-21(29)23(31)11-18/h1-8,10-13,27-33H,9,14H2" 
OD9 InChIKey         InChI                1.03  MJBOUCYGTWUCAO-UHFFFAOYSA-N                                                                                                                                    
OD9 SMILES_CANONICAL CACTVS               3.385 "Oc1ccc(Cc2ccc(CN[S](=O)(=O)c3cc(O)c(O)cc3c4ccc(O)c(O)c4)cc2)cc1O"                                                                                             
OD9 SMILES           CACTVS               3.385 "Oc1ccc(Cc2ccc(CN[S](=O)(=O)c3cc(O)c(O)cc3c4ccc(O)c(O)c4)cc2)cc1O"                                                                                             
OD9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Cc2ccc(c(c2)O)O)CNS(=O)(=O)c3cc(c(cc3c4ccc(c(c4)O)O)O)O"                                                                                             
OD9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1Cc2ccc(c(c2)O)O)CNS(=O)(=O)c3cc(c(cc3c4ccc(c(c4)O)O)O)O"                                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
OD9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1M)-N-({4-[(3,4-dihydroxyphenyl)methyl]phenyl}methyl)-3',4,4',5-tetrahydroxy[1,1'-biphenyl]-2-sulfonamide"               
OD9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[3,4-bis(oxidanyl)phenyl]-~{N}-[[4-[[3,4-bis(oxidanyl)phenyl]methyl]phenyl]methyl]-4,5-bis(oxidanyl)benzenesulfonamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
OD9 "Create component" 2022-04-27 RCSB 
OD9 "Initial release"  2023-04-12 RCSB 
# 
