data_NJ9
# 
_chem_comp.id                                    NJ9 
_chem_comp.name                                  "3-(4-{[(5S)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H25 N5 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-04 
_chem_comp.pdbx_modified_date                    2022-08-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        375.422 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NJ9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UKP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NJ9 C4  C1  C 0 1 N N S 53.257 107.625 74.866 -0.141 0.487  0.443  C4  NJ9 1  
NJ9 C5  C2  C 0 1 N N N 55.073 111.224 73.770 4.128  0.145  0.588  C5  NJ9 2  
NJ9 C6  C3  C 0 1 N N N 53.304 111.676 72.106 4.139  -0.200 -1.808 C6  NJ9 3  
NJ9 C7  C4  C 0 1 N N N 52.505 106.433 75.448 -1.550 1.107  0.369  C7  NJ9 4  
NJ9 C8  C5  C 0 1 N N N 55.397 112.996 72.153 6.217  -0.264 -0.566 C8  NJ9 5  
NJ9 C10 C6  C 0 1 Y N N 52.305 104.040 74.726 -3.836 -0.013 0.224  C10 NJ9 6  
NJ9 C13 C7  C 0 1 Y N N 50.372 102.585 75.139 -5.936 -1.143 -0.037 C13 NJ9 7  
NJ9 C15 C8  C 0 1 Y N N 51.196 101.446 75.026 -6.600 0.081  0.055  C15 NJ9 8  
NJ9 C1  C9  C 0 1 N N N 52.373 108.665 74.148 0.697  0.918  -0.762 C1  NJ9 9  
NJ9 C2  C10 C 0 1 N N N 52.380 110.758 72.929 2.787  0.509  -1.916 C2  NJ9 10 
NJ9 C3  C11 C 0 1 N N N 54.057 110.371 74.545 2.775  0.854  0.480  C3  NJ9 11 
NJ9 C12 C12 C 0 1 Y N N 53.124 102.894 74.619 -4.496 1.207  0.316  C12 NJ9 12 
NJ9 C16 C13 C 0 1 N N N 50.640 100.101 75.185 -8.076 0.132  -0.035 C16 NJ9 13 
NJ9 C11 C14 C 0 1 Y N N 50.925 103.869 74.992 -4.561 -1.187 0.048  C11 NJ9 14 
NJ9 C14 C15 C 0 1 Y N N 52.572 101.612 74.768 -5.870 1.258  0.233  C14 NJ9 15 
NJ9 C17 C16 C 0 1 N N N 54.790 113.745 70.957 7.045  0.490  0.476  C17 NJ9 16 
NJ9 C18 C17 C 0 1 N N N 55.880 114.589 70.308 8.416  -0.128 0.572  C18 NJ9 17 
NJ9 C9  C18 C 0 1 N N N 53.819 105.739 73.637 -1.702 -1.176 0.333  C9  NJ9 18 
NJ9 N1  N1  N 0 1 N N N 53.198 109.718 73.555 2.034  0.315  -0.669 N1  NJ9 19 
NJ9 N2  N2  N 0 1 N N N 54.395 112.250 72.938 4.881  0.338  -0.659 N2  NJ9 20 
NJ9 N3  N3  N 0 1 N N N 52.877 105.339 74.579 -2.443 -0.060 0.304  N3  NJ9 21 
NJ9 N4  N4  N 0 1 N N N 50.937 99.386  76.278 -8.731 1.341  0.056  N4  NJ9 22 
NJ9 N5  N5  N 0 1 N N N 49.837 99.548  74.264 -8.757 -0.967 -0.200 N5  NJ9 23 
NJ9 O1  O1  O 0 1 N N N 54.133 107.003 73.943 -0.386 -0.949 0.412  O1  NJ9 24 
NJ9 O2  O2  O 0 1 N N N 54.302 105.107 72.692 -2.181 -2.292 0.292  O2  NJ9 25 
NJ9 O3  O3  O 0 1 N N N 55.607 115.751 69.937 8.702  -1.075 -0.123 O3  NJ9 26 
NJ9 O4  O4  O 0 1 N N N 56.993 114.034 70.211 9.320  0.373  1.428  O4  NJ9 27 
NJ9 H1  H1  H 0 1 N N N 53.822 108.125 75.667 0.353  0.771  1.372  H1  NJ9 28 
NJ9 H2  H2  H 0 1 N N N 55.667 110.568 73.116 4.691  0.563  1.422  H2  NJ9 29 
NJ9 H3  H3  H 0 1 N N N 55.739 111.727 74.487 3.967  -0.920 0.755  H3  NJ9 30 
NJ9 H4  H4  H 0 1 N N N 53.750 111.091 71.288 3.979  -1.269 -1.668 H4  NJ9 31 
NJ9 H5  H5  H 0 1 N N N 52.706 112.498 71.686 4.711  -0.034 -2.720 H5  NJ9 32 
NJ9 H6  H6  H 0 1 N N N 51.419 106.603 75.422 -1.756 1.697  1.262  H6  NJ9 33 
NJ9 H7  H7  H 0 1 N N N 52.821 106.237 76.483 -1.653 1.720  -0.526 H7  NJ9 34 
NJ9 H8  H8  H 0 1 N N N 56.147 112.285 71.777 6.711  -0.204 -1.536 H8  NJ9 35 
NJ9 H9  H9  H 0 1 N N N 55.885 113.728 72.813 6.124  -1.309 -0.270 H9  NJ9 36 
NJ9 H10 H10 H 0 1 N N N 49.317 102.471 75.338 -6.498 -2.054 -0.174 H10 NJ9 37 
NJ9 H11 H11 H 0 1 N N N 51.680 109.114 74.875 0.212  0.586  -1.680 H11 NJ9 38 
NJ9 H12 H12 H 0 1 N N N 51.799 108.165 73.354 0.788  2.004  -0.772 H12 NJ9 39 
NJ9 H13 H13 H 0 1 N N N 51.869 111.346 73.706 2.947  1.574  -2.083 H13 NJ9 40 
NJ9 H14 H14 H 0 1 N N N 51.633 110.295 72.268 2.223  0.091  -2.750 H14 NJ9 41 
NJ9 H15 H15 H 0 1 N N N 53.453 111.011 75.205 2.203  0.687  1.392  H15 NJ9 42 
NJ9 H16 H16 H 0 1 N N N 54.581 109.614 75.147 2.935  1.923  0.341  H16 NJ9 43 
NJ9 H17 H17 H 0 1 N N N 54.180 103.005 74.422 -3.930 2.117  0.453  H17 NJ9 44 
NJ9 H18 H18 H 0 1 N N N 50.289 104.737 75.083 -4.046 -2.133 -0.024 H18 NJ9 45 
NJ9 H19 H19 H 0 1 N N N 53.208 100.743 74.684 -6.382 2.206  0.304  H19 NJ9 46 
NJ9 H20 H20 H 0 1 N N N 53.974 114.396 71.303 7.138  1.535  0.180  H20 NJ9 47 
NJ9 H21 H21 H 0 1 N N N 54.398 113.022 70.227 6.551  0.430  1.446  H21 NJ9 48 
NJ9 H24 H24 H 0 1 N N N 51.536 99.771  76.980 -8.224 2.159  0.179  H24 NJ9 49 
NJ9 H25 H25 H 0 1 N N N 50.560 98.467  76.392 -9.698 1.374  -0.002 H25 NJ9 50 
NJ9 H26 H26 H 0 1 N N N 49.548 98.627  74.524 -9.724 -0.934 -0.259 H26 NJ9 51 
NJ9 H27 H27 H 0 1 N N N 57.612 114.632 69.808 10.186 -0.057 1.454  H27 NJ9 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NJ9 O3  C18 DOUB N N 1  
NJ9 O4  C18 SING N N 2  
NJ9 C18 C17 SING N N 3  
NJ9 C17 C8  SING N N 4  
NJ9 C6  C2  SING N N 5  
NJ9 C6  N2  SING N N 6  
NJ9 C8  N2  SING N N 7  
NJ9 O2  C9  DOUB N N 8  
NJ9 C2  N1  SING N N 9  
NJ9 N2  C5  SING N N 10 
NJ9 N1  C1  SING N N 11 
NJ9 N1  C3  SING N N 12 
NJ9 C9  O1  SING N N 13 
NJ9 C9  N3  SING N N 14 
NJ9 C5  C3  SING N N 15 
NJ9 O1  C4  SING N N 16 
NJ9 C1  C4  SING N N 17 
NJ9 N5  C16 DOUB N N 18 
NJ9 N3  C10 SING N N 19 
NJ9 N3  C7  SING N N 20 
NJ9 C12 C10 DOUB Y N 21 
NJ9 C12 C14 SING Y N 22 
NJ9 C10 C11 SING Y N 23 
NJ9 C14 C15 DOUB Y N 24 
NJ9 C4  C7  SING N N 25 
NJ9 C11 C13 DOUB Y N 26 
NJ9 C15 C13 SING Y N 27 
NJ9 C15 C16 SING N N 28 
NJ9 C16 N4  SING N N 29 
NJ9 C4  H1  SING N N 30 
NJ9 C5  H2  SING N N 31 
NJ9 C5  H3  SING N N 32 
NJ9 C6  H4  SING N N 33 
NJ9 C6  H5  SING N N 34 
NJ9 C7  H6  SING N N 35 
NJ9 C7  H7  SING N N 36 
NJ9 C8  H8  SING N N 37 
NJ9 C8  H9  SING N N 38 
NJ9 C13 H10 SING N N 39 
NJ9 C1  H11 SING N N 40 
NJ9 C1  H12 SING N N 41 
NJ9 C2  H13 SING N N 42 
NJ9 C2  H14 SING N N 43 
NJ9 C3  H15 SING N N 44 
NJ9 C3  H16 SING N N 45 
NJ9 C12 H17 SING N N 46 
NJ9 C11 H18 SING N N 47 
NJ9 C14 H19 SING N N 48 
NJ9 C17 H20 SING N N 49 
NJ9 C17 H21 SING N N 50 
NJ9 N4  H24 SING N N 51 
NJ9 N4  H25 SING N N 52 
NJ9 N5  H26 SING N N 53 
NJ9 O4  H27 SING N N 54 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NJ9 SMILES           ACDLabs              12.01 "N=C(N)c1ccc(cc1)N1CC(CN2CCN(CCC(=O)O)CC2)OC1=O"                                                                                                       
NJ9 InChI            InChI                1.03  "InChI=1S/C18H25N5O4/c19-17(20)13-1-3-14(4-2-13)23-12-15(27-18(23)26)11-22-9-7-21(8-10-22)6-5-16(24)25/h1-4,15H,5-12H2,(H3,19,20)(H,24,25)/t15-/m0/s1" 
NJ9 InChIKey         InChI                1.03  BILBLZKBVDSYSZ-HNNXBMFYSA-N                                                                                                                            
NJ9 SMILES_CANONICAL CACTVS               3.385 "NC(=N)c1ccc(cc1)N2C[C@H](CN3CCN(CC3)CCC(O)=O)OC2=O"                                                                                                   
NJ9 SMILES           CACTVS               3.385 "NC(=N)c1ccc(cc1)N2C[CH](CN3CCN(CC3)CCC(O)=O)OC2=O"                                                                                                    
NJ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(\c1ccc(cc1)N2C[C@@H](OC2=O)CN3CCN(CC3)CCC(=O)O)/N"                                                                                            
NJ9 SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc(ccc1C(=N)N)N2CC(OC2=O)CN3CCN(CC3)CCC(=O)O"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NJ9 "SYSTEMATIC NAME" ACDLabs              12.01 "3-(4-{[(5S)-3-(4-carbamimidoylphenyl)-2-oxo-1,3-oxazolidin-5-yl]methyl}piperazin-1-yl)propanoic acid"              
NJ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "3-[4-[[(5~{S})-3-(4-carbamimidoylphenyl)-2-oxidanylidene-1,3-oxazolidin-5-yl]methyl]piperazin-1-yl]propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NJ9 "Create component" 2022-04-04 RCSB 
NJ9 "Initial release"  2022-08-17 RCSB 
# 
