data_G39
#

_chem_comp.id                                   G39
_chem_comp.name                                 "(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C14 H24 N2 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "Oseltamivir carboxylate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-08
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       284.351
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    G39
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2QWK
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
G39  C1    C1    C  0  1  N  N  N  23.722  19.958  64.748   3.725  -0.455  -0.017  C1    G39   1  
G39  O1A   O1A   O  0  1  N  N  N  24.248  21.089  64.813   3.853  -1.657  -0.140  O1A   G39   2  
G39  O1B   O1B   O  0  1  N  N  N  22.597  19.769  65.225   4.810   0.322   0.175  O1B   G39   3  
G39  C2    C2    C  0  1  N  N  N  24.381  18.920  64.059   2.389   0.153  -0.085  C2    G39   4  
G39  C3    C3    C  0  1  N  N  N  23.646  17.631  63.729   2.280   1.641   0.072  C3    G39   5  
G39  C4    C4    C  0  1  N  N  S  24.240  16.656  62.667   0.922   2.127  -0.441  C4    G39   6  
G39  C5    C5    C  0  1  N  N  R  25.748  16.612  62.696  -0.175   1.260   0.188  C5    G39   7  
G39  N5    N5    N  0  1  N  N  N  26.267  15.800  61.595  -1.490   1.817  -0.138  N5    G39   8  
G39  C10   C10   C  0  1  N  N  N  26.846  14.628  61.830  -2.544   1.571   0.666  C10   G39   9  
G39  O10   O10   O  0  1  N  N  N  27.001  14.191  62.980  -2.404   0.889   1.658  O10   G39  10  
G39  C11   C11   C  0  1  N  N  N  27.342  13.883  60.612  -3.897   2.144   0.330  C11   G39  11  
G39  C6    C6    C  0  1  N  N  R  26.275  18.090  62.623  -0.061  -0.156  -0.380  C6    G39  12  
G39  C7    C7    C  0  1  N  N  N  25.676  19.098  63.540   1.357  -0.640  -0.285  C7    G39  13  
G39  O7    O7    O  0  1  N  N  N  27.711  18.228  62.576  -0.914  -1.033   0.359  O7    G39  14  
G39  C8    C8    C  0  1  N  N  N  28.545  18.291  61.481  -1.424  -2.128  -0.405  C8    G39  15  
G39  C9    C9    C  0  1  N  N  N  28.451  19.714  60.908  -1.652  -3.329   0.515  C9    G39  16  
G39  C81   C81   C  0  1  N  N  N  29.872  17.777  62.055  -2.749  -1.724  -1.055  C81   G39  17  
G39  C82   C82   C  0  1  N  N  N  29.783  16.403  62.510  -2.499  -0.605  -2.068  C82   G39  18  
G39  C91   C91   C  0  1  N  N  N  28.839  20.754  61.897  -0.309  -3.811   1.068  C91   G39  19  
G39  N4    N4    N  0  1  N  N  N  23.731  15.402  62.988   0.723   3.531  -0.058  N4    G39  20  
G39  HO1   HO1   H  0  1  N  N  N  22.272  20.578  65.601   5.668  -0.122   0.209  HO1   G39  21  
G39  H31   H31   H  0  1  N  N  N  23.586  17.062  64.669   2.382   1.902   1.125  H31   G39  22  
G39  H32   H32   H  0  1  N  N  N  22.656  17.929  63.353   3.075   2.124  -0.497  H32   G39  23  
G39  H4    H4    H  0  1  N  N  N  23.966  16.988  61.655   0.886   2.032  -1.527  H4    G39  24  
G39  H5    H5    H  0  1  N  N  N  26.099  16.140  63.626  -0.046   1.235   1.270  H5    G39  25  
G39  HN5   HN5   H  0  1  N  N  N  26.185  16.131  60.655  -1.602   2.363  -0.932  HN5   G39  26  
G39  H111  H111  H  0  0  N  N  N  27.830  12.949  60.927  -3.828   2.724  -0.590  H111  G39  27  
G39  H112  H112  H  0  0  N  N  N  26.492  13.649  59.954  -4.612   1.333   0.195  H112  G39  28  
G39  H113  H113  H  0  0  N  N  N  28.065  14.509  60.069  -4.229   2.790   1.143  H113  G39  29  
G39  H6    H6    H  0  1  N  N  N  25.872  18.354  61.634  -0.369  -0.152  -1.425  H6    G39  30  
G39  H7    H7    H  0  1  N  N  N  26.243  19.977  63.810   1.540  -1.700  -0.383  H7    G39  31  
G39  H8    H8    H  0  1  N  N  N  28.323  17.682  60.592  -0.705  -2.395  -1.180  H8    G39  32  
G39  H91   H91   H  0  1  N  N  N  29.127  19.786  60.043  -2.301  -3.036   1.340  H91   G39  33  
G39  H92   H92   H  0  1  N  N  N  27.411  19.897  60.600  -2.123  -4.134  -0.049  H92   G39  34  
G39  H811  H811  H  0  0  N  N  N  30.638  17.835  61.268  -3.181  -2.585  -1.564  H811  G39  35  
G39  H812  H812  H  0  0  N  N  N  30.151  18.410  62.910  -3.438  -1.372  -0.287  H812  G39  36  
G39  H821  H821  H  0  0  N  N  N  30.757  16.085  62.911  -2.067   0.257  -1.559  H821  G39  37  
G39  H822  H822  H  0  0  N  N  N  29.020  16.327  63.299  -1.810  -0.957  -2.836  H822  G39  38  
G39  H823  H823  H  0  0  N  N  N  29.504  15.755  61.666  -3.443  -0.317  -2.531  H823  G39  39  
G39  H911  H911  H  0  0  N  N  N  28.754  21.749  61.436   0.339  -4.104   0.242  H911  G39  40  
G39  H912  H912  H  0  0  N  N  N  28.172  20.696  62.770   0.161  -3.005   1.632  H912  G39  41  
G39  H913  H913  H  0  0  N  N  N  29.878  20.586  62.217  -0.472  -4.666   1.723  H913  G39  42  
G39  HN41  HN41  H  0  0  N  N  N  24.077  14.725  62.338   1.444   4.118  -0.448  HN41  G39  43  
G39  HN42  HN42  H  0  0  N  N  N  24.017  15.153  63.913  -0.193   3.854  -0.330  HN42  G39  44  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
G39  C1   O1A   DOUB  N  N   1  
G39  C1   O1B   SING  N  N   2  
G39  C1   C2    SING  N  N   3  
G39  O1B  HO1   SING  N  N   4  
G39  C2   C3    SING  N  N   5  
G39  C2   C7    DOUB  N  N   6  
G39  C3   C4    SING  N  N   7  
G39  C3   H31   SING  N  N   8  
G39  C3   H32   SING  N  N   9  
G39  C4   C5    SING  N  N  10  
G39  C4   N4    SING  N  N  11  
G39  C4   H4    SING  N  N  12  
G39  C5   N5    SING  N  N  13  
G39  C5   C6    SING  N  N  14  
G39  C5   H5    SING  N  N  15  
G39  N5   C10   SING  N  N  16  
G39  N5   HN5   SING  N  N  17  
G39  C10  O10   DOUB  N  N  18  
G39  C10  C11   SING  N  N  19  
G39  C11  H111  SING  N  N  20  
G39  C11  H112  SING  N  N  21  
G39  C11  H113  SING  N  N  22  
G39  C6   C7    SING  N  N  23  
G39  C6   O7    SING  N  N  24  
G39  C6   H6    SING  N  N  25  
G39  C7   H7    SING  N  N  26  
G39  O7   C8    SING  N  N  27  
G39  C8   C9    SING  N  N  28  
G39  C8   C81   SING  N  N  29  
G39  C8   H8    SING  N  N  30  
G39  C9   C91   SING  N  N  31  
G39  C9   H91   SING  N  N  32  
G39  C9   H92   SING  N  N  33  
G39  C81  C82   SING  N  N  34  
G39  C81  H811  SING  N  N  35  
G39  C81  H812  SING  N  N  36  
G39  C82  H821  SING  N  N  37  
G39  C82  H822  SING  N  N  38  
G39  C82  H823  SING  N  N  39  
G39  C91  H911  SING  N  N  40  
G39  C91  H912  SING  N  N  41  
G39  C91  H913  SING  N  N  42  
G39  N4   HN41  SING  N  N  43  
G39  N4   HN42  SING  N  N  44  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
G39  SMILES            ACDLabs               12.01  "O=C(O)C1=CC(OC(CC)CC)C(NC(=O)C)C(N)C1"  
G39  SMILES_CANONICAL  CACTVS                3.370  "CCC(CC)O[C@@H]1C=C(C[C@H](N)[C@H]1NC(C)=O)C(O)=O"  
G39  SMILES            CACTVS                3.370  "CCC(CC)O[CH]1C=C(C[CH](N)[CH]1NC(C)=O)C(O)=O"  
G39  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.0  "CCC(CC)O[C@@H]1C=C(C[C@@H]([C@H]1NC(=O)C)N)C(=O)O"  
G39  SMILES            "OpenEye OEToolkits"  1.7.0  "CCC(CC)OC1C=C(CC(C1NC(=O)C)N)C(=O)O"  
G39  InChI             InChI                 1.03   "InChI=1S/C14H24N2O4/c1-4-10(5-2)20-12-7-9(14(18)19)6-11(15)13(12)16-8(3)17/h7,10-13H,4-6,15H2,1-3H3,(H,16,17)(H,18,19)/t11-,12+,13+/m0/s1"  
G39  InChIKey          InChI                 1.03   NENPYTRHICXVCS-YNEHKIRRSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
G39  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid"  
G39  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.7.0  "(3R,4R,5S)-4-acetamido-5-azanyl-3-pentan-3-yloxy-cyclohexene-1-carboxylic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
G39  "Create component"   1999-07-08  RCSB  
G39  "Modify descriptor"  2011-06-04  RCSB  
G39  "Modify synonyms"    2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     G39
_pdbx_chem_comp_synonyms.name        "Oseltamivir carboxylate"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
