data_FK9
#

_chem_comp.id                                   FK9
_chem_comp.name                                 "3-(propylsulfanyl)propyl alpha-D-mannopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C12 H24 O6 S"
_chem_comp.mon_nstd_parent_comp_id              MAN
_chem_comp.pdbx_synonyms                        
;PROPYL THIOPROPYL ALPHA-D-MANNOPYRANOSIDE; 3-(propylsulfanyl)propyl alpha-D-mannoside; 3-(propylsulfanyl)propyl
D-mannoside; 3-(propylsulfanyl)propyl mannoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2012-05-26
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       296.380
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    FK9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4AVH
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  FK9  "PROPYL THIOPROPYL ALPHA-D-MANNOPYRANOSIDE"   PDB  ?  
2  FK9  "3-(propylsulfanyl)propyl alpha-D-mannoside"  PDB  ?  
3  FK9  "3-(propylsulfanyl)propyl D-mannoside"        PDB  ?  
4  FK9  "3-(propylsulfanyl)propyl mannoside"          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FK9  O6    O6    O  0  1  N  N  N  -28.868  -32.121   8.632  -1.587   3.332   0.595  O6    FK9   1  
FK9  C6    C6    C  0  1  N  N  N  -28.460  -33.444   8.251  -2.756   2.665   0.115  C6    FK9   2  
FK9  C5    C5    C  0  1  N  N  R  -29.137  -33.859   6.947  -2.455   1.176  -0.068  C5    FK9   3  
FK9  O5    O5    O  0  1  N  N  N  -30.563  -33.906   7.104  -2.178   0.586   1.203  O5    FK9   4  
FK9  C4    C4    C  0  1  N  N  S  -28.754  -32.940   5.790  -3.667   0.484  -0.698  C4    FK9   5  
FK9  O4    O4    O  0  1  N  N  N  -27.324  -32.951   5.645  -3.911   1.033  -1.994  O4    FK9   6  
FK9  C3    C3    C  0  1  N  N  S  -29.432  -33.409   4.501  -3.381  -1.016  -0.823  C3    FK9   7  
FK9  O3    O3    O  0  1  N  N  N  -29.076  -32.570   3.379  -4.535  -1.681  -1.341  O3    FK9   8  
FK9  C2    C2    C  0  1  N  N  S  -30.946  -33.453   4.710  -3.045  -1.577   0.562  C2    FK9   9  
FK9  O2    O2    O  0  1  N  N  N  -31.485  -32.141   4.954  -4.176  -1.432   1.424  O2    FK9  10  
FK9  C1    C1    C  0  1  N  N  S  -31.269  -34.335   5.912  -1.857  -0.806   1.143  C1    FK9  11  
FK9  O1    O1    O  0  1  N  N  N  -30.901  -35.664   5.548  -0.712  -0.995   0.308  O1    FK9  12  
FK9  C7    C7    C  0  1  N  N  N  -31.430  -36.621   6.462   0.506  -0.505   0.873  C7    FK9  13  
FK9  C8    C8    C  0  1  N  N  N  -30.876  -37.996   6.128   1.658  -0.759  -0.101  C8    FK9  14  
FK9  C9    C9    C  0  1  N  N  N  -30.096  -38.548   7.310   2.962  -0.235   0.503  C9    FK9  15  
FK9  C13   C13   C  0  1  N  N  N  -29.811  -41.145   8.538   5.762   0.142   0.227  C13   FK9  16  
FK9  C14   C14   C  0  1  N  N  N  -28.619  -40.896   9.472   7.017  -0.038  -0.630  C14   FK9  17  
FK9  C15   C15   C  0  1  N  N  N  -27.315  -40.712   8.717   8.227   0.535   0.111  C15   FK9  18  
FK9  S1    S1    S  0  1  N  N  N  -29.690  -40.238   7.022   4.328  -0.536  -0.652  S1    FK9  19  
FK9  HO6   H6    H  0  1  N  Y  N  -28.439  -31.878   9.444  -1.705   4.281   0.734  HO6   FK9  20  
FK9  H61   H61C  H  0  1  N  N  N  -27.369  -33.460   8.113  -3.565   2.786   0.836  H61   FK9  21  
FK9  H62   H62C  H  0  1  N  N  N  -28.740  -34.152   9.045  -3.054   3.096  -0.841  H62   FK9  22  
FK9  H5    H5    H  0  1  N  N  N  -28.779  -34.869   6.697  -1.590   1.058  -0.721  H5    FK9  23  
FK9  H4    H4    H  0  1  N  N  N  -29.100  -31.921   6.019  -4.543   0.637  -0.066  H4    FK9  24  
FK9  H1    H1    H  0  1  N  N  N  -32.353  -34.288   6.094  -1.640  -1.173   2.146  H1    FK9  25  
FK9  HO4   HA    H  0  1  N  Y  N  -27.074  -32.382   4.927  -4.667   0.640  -2.452  HO4   FK9  26  
FK9  H3    H3    H  0  1  N  N  N  -29.092  -34.435   4.298  -2.538  -1.171  -1.495  H3    FK9  27  
FK9  HO3   HB    H  0  1  N  Y  N  -29.511  -32.886   2.596  -4.424  -2.636  -1.447  HO3   FK9  28  
FK9  H2    H2    H  0  1  N  N  N  -31.413  -33.890   3.815  -2.787  -2.633   0.474  H2    FK9  29  
FK9  HO2   HC    H  0  1  N  Y  N  -32.425  -32.202   5.079  -4.033  -1.768   2.319  HO2   FK9  30  
FK9  H71C  H71C  H  0  0  N  N  N  -31.141  -36.348   7.488   0.416   0.566   1.058  H71C  FK9  31  
FK9  H72C  H72C  H  0  0  N  N  N  -32.527  -36.638   6.382   0.704  -1.020   1.812  H72C  FK9  32  
FK9  H81C  H81C  H  0  0  N  N  N  -31.708  -38.676   5.892   1.748  -1.830  -0.286  H81C  FK9  33  
FK9  H82C  H82C  H  0  0  N  N  N  -30.209  -37.917   5.257   1.459  -0.244  -1.041  H82C  FK9  34  
FK9  H91C  H91C  H  0  0  N  N  N  -29.171  -37.967   7.440   2.872   0.836   0.688  H91C  FK9  35  
FK9  H92C  H92C  H  0  0  N  N  N  -30.709  -38.470   8.220   3.160  -0.750   1.443  H92C  FK9  36  
FK9  H151  H151  H  0  0  N  N  N  -26.498  -40.538   9.432   9.121   0.407  -0.500  H151  FK9  37  
FK9  H152  H152  H  0  0  N  N  N  -27.101  -41.617   8.129   8.067   1.596   0.302  H152  FK9  38  
FK9  H153  H153  H  0  0  N  N  N  -27.401  -39.848   8.041   8.355   0.010   1.057  H153  FK9  39  
FK9  H141  H141  H  0  0  N  N  N  -28.516  -41.757  10.149   7.177  -1.099  -0.822  H141  FK9  40  
FK9  H142  H142  H  0  0  N  N  N  -28.816  -39.988  10.061   6.889   0.487  -1.577  H142  FK9  41  
FK9  H131  H131  H  0  0  N  N  N  -29.856  -42.219   8.303   5.890  -0.383   1.173  H131  FK9  42  
FK9  H132  H132  H  0  0  N  N  N  -30.733  -40.844   9.056   5.602   1.203   0.418  H132  FK9  43  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FK9  O6   C6    SING  N  N   1  
FK9  C6   C5    SING  N  N   2  
FK9  C5   O5    SING  N  N   3  
FK9  C5   C4    SING  N  N   4  
FK9  O5   C1    SING  N  N   5  
FK9  C4   O4    SING  N  N   6  
FK9  C4   C3    SING  N  N   7  
FK9  C3   O3    SING  N  N   8  
FK9  C3   C2    SING  N  N   9  
FK9  C2   O2    SING  N  N  10  
FK9  C2   C1    SING  N  N  11  
FK9  C1   O1    SING  N  N  12  
FK9  O1   C7    SING  N  N  13  
FK9  C7   C8    SING  N  N  14  
FK9  C8   C9    SING  N  N  15  
FK9  C9   S1    SING  N  N  16  
FK9  C15  C14   SING  N  N  17  
FK9  C14  C13   SING  N  N  18  
FK9  C13  S1    SING  N  N  19  
FK9  O6   HO6   SING  N  N  20  
FK9  C6   H61   SING  N  N  21  
FK9  C6   H62   SING  N  N  22  
FK9  C5   H5    SING  N  N  23  
FK9  C4   H4    SING  N  N  24  
FK9  C1   H1    SING  N  N  25  
FK9  O4   HO4   SING  N  N  26  
FK9  C3   H3    SING  N  N  27  
FK9  O3   HO3   SING  N  N  28  
FK9  C2   H2    SING  N  N  29  
FK9  O2   HO2   SING  N  N  30  
FK9  C7   H71C  SING  N  N  31  
FK9  C7   H72C  SING  N  N  32  
FK9  C8   H81C  SING  N  N  33  
FK9  C8   H82C  SING  N  N  34  
FK9  C9   H91C  SING  N  N  35  
FK9  C9   H92C  SING  N  N  36  
FK9  C15  H151  SING  N  N  37  
FK9  C15  H152  SING  N  N  38  
FK9  C15  H153  SING  N  N  39  
FK9  C14  H141  SING  N  N  40  
FK9  C14  H142  SING  N  N  41  
FK9  C13  H131  SING  N  N  42  
FK9  C13  H132  SING  N  N  43  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FK9  SMILES            ACDLabs               12.01  "O(CCCSCCC)C1OC(C(O)C(O)C1O)CO"  
FK9  InChI             InChI                 1.03   "InChI=1S/C12H24O6S/c1-2-5-19-6-3-4-17-12-11(16)10(15)9(14)8(7-13)18-12/h8-16H,2-7H2,1H3/t8-,9-,10+,11+,12+/m1/s1"  
FK9  InChIKey          InChI                 1.03   VPHBOBPNUZWASC-GCHJQGSQSA-N  
FK9  SMILES_CANONICAL  CACTVS                3.385  "CCCSCCCO[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1O"  
FK9  SMILES            CACTVS                3.385  "CCCSCCCO[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"  
FK9  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "CCCSCCCO[C@@H]1[C@H]([C@H]([C@@H]([C@H](O1)CO)O)O)O"  
FK9  SMILES            "OpenEye OEToolkits"  1.9.2  "CCCSCCCOC1C(C(C(C(O1)CO)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FK9  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-(propylsulfanyl)propyl alpha-D-mannopyranoside"  
FK9  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(2R,3S,4S,5S,6S)-2-(hydroxymethyl)-6-(3-propylsulfanylpropoxy)oxane-3,4,5-triol"  
#
_pdbx_chem_comp_related.comp_id            FK9
_pdbx_chem_comp_related.related_comp_id    MAN
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  FK9  C1   MAN  C1   "Carbohydrate core"  
 2  FK9  C2   MAN  C2   "Carbohydrate core"  
 3  FK9  C3   MAN  C3   "Carbohydrate core"  
 4  FK9  C4   MAN  C4   "Carbohydrate core"  
 5  FK9  C5   MAN  C5   "Carbohydrate core"  
 6  FK9  C6   MAN  C6   "Carbohydrate core"  
 7  FK9  O1   MAN  O1   "Carbohydrate core"  
 8  FK9  O2   MAN  O2   "Carbohydrate core"  
 9  FK9  O3   MAN  O3   "Carbohydrate core"  
10  FK9  O4   MAN  O4   "Carbohydrate core"  
11  FK9  O5   MAN  O5   "Carbohydrate core"  
12  FK9  O6   MAN  O6   "Carbohydrate core"  
13  FK9  H1   MAN  H1   "Carbohydrate core"  
14  FK9  H2   MAN  H2   "Carbohydrate core"  
15  FK9  H3   MAN  H3   "Carbohydrate core"  
16  FK9  H4   MAN  H4   "Carbohydrate core"  
17  FK9  H5   MAN  H5   "Carbohydrate core"  
18  FK9  HO6  MAN  HO6  "Carbohydrate core"  
19  FK9  H61  MAN  H61  "Carbohydrate core"  
20  FK9  H62  MAN  H62  "Carbohydrate core"  
21  FK9  HO4  MAN  HO4  "Carbohydrate core"  
22  FK9  HO3  MAN  HO3  "Carbohydrate core"  
23  FK9  HO2  MAN  HO2  "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
FK9  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
FK9  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
FK9  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
FK9  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FK9  "Create component"          2012-05-26  EBI   
FK9  "Modify descriptor"         2014-09-05  RCSB  
FK9  "Other modification"        2020-07-03  RCSB  
FK9  "Modify parent residue"     2020-07-17  RCSB  
FK9  "Modify name"               2020-07-17  RCSB  
FK9  "Modify synonyms"           2020-07-17  RCSB  
FK9  "Modify internal type"      2020-07-17  RCSB  
FK9  "Modify linking type"       2020-07-17  RCSB  
FK9  "Modify atom id"            2020-07-17  RCSB  
FK9  "Modify component atom id"  2020-07-17  RCSB  
FK9  "Modify leaving atom flag"  2020-07-17  RCSB  
##
