data_CX9
#

_chem_comp.id                                   CX9
_chem_comp.name                                 "3,7-DIMETHYL-1-[3-(3-METHYL-2,6-DIOXO-9H-PURIN-1-YL)PROPYL]PURINE-2,6-DIONE"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H18 N8 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;BISDIONIN F;
3,7-DIMETHYL-1-[3-(3-METHYL-2,6-DIOXO-2,3,6,7-TETRAHYDRO-1H-PURIN-1-YL)PROPYL]-2,3,6,7-TETRAHYDRO-1H-PURINE-2,6-DIONE
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2011-03-10
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       386.365
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    CX9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       2YBU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CX9  O6    O6    O  0  1  N  N  N  14.512  13.224  -62.992   2.488  -1.820  -0.992  O6    CX9   1  
CX9  C6    C6    C  0  1  N  N  N  13.441  12.630  -62.823   2.897  -0.749  -0.581  C6    CX9   2  
CX9  C5    C5    C  0  1  Y  N  N  12.784  12.024  -63.915   4.053  -0.690   0.228  C5    CX9   3  
CX9  N1    N1    N  0  1  N  N  N  12.856  12.570  -61.514   2.255   0.395  -0.896  N1    CX9   4  
CX9  N7    N7    N  0  1  Y  N  N  13.039  11.896  -65.232   4.935  -1.627   0.727  N7    CX9   5  
CX9  C4    C4    C  0  1  Y  N  N  11.552  11.359  -63.725   4.498   0.545   0.683  C4    CX9   6  
CX9  CAA   CAA   C  0  1  N  N  N  14.212  12.416  -65.990   4.881  -3.075   0.516  CAA   CX9   7  
CX9  C8    C8    C  0  1  Y  N  N  12.057  11.210  -65.835   5.857  -0.956   1.446  C8    CX9   8  
CX9  N9    N9    N  0  1  Y  N  N  11.145  10.873  -64.909   5.593   0.326   1.416  N9    CX9   9  
CX9  N3    N3    N  0  1  N  N  N  10.958  11.276  -62.446   3.792   1.683   0.328  N3    CX9  10  
CX9  CAC   CAC   C  0  1  N  N  N   9.652  10.544  -62.289   4.240   2.997   0.795  CAC   CX9  11  
CX9  C2    C2    C  0  1  N  N  N  11.614  11.876  -61.338   2.696   1.583  -0.449  C2    CX9  12  
CX9  O2    O2    O  0  1  N  N  N  11.094  11.790  -60.222   2.092   2.593  -0.753  O2    CX9  13  
CX9  CAK   CAK   C  0  1  N  N  N  13.528  13.205  -60.307   1.058   0.341  -1.739  CAK   CX9  14  
CX9  CAL   CAL   C  0  1  N  N  N  13.709  14.758  -60.410  -0.182   0.184  -0.856  CAL   CX9  15  
CX9  CA0   CA0   C  0  1  N  N  N  12.392  15.531  -60.286  -1.431   0.128  -1.737  CA0   CX9  16  
CX9  N10   N10   N  0  1  N  N  N  11.410  15.065  -61.332  -2.618  -0.022  -0.891  N10   CX9  17  
CX9  CAP   CAP   C  0  1  N  N  N  11.774  15.029  -62.717  -3.258   1.079  -0.440  CAP   CX9  18  
CX9  CAR   CAR   C  0  1  N  N  N  10.095  14.639  -60.946  -3.059  -1.252  -0.580  CAR   CX9  19  
CX9  OAF   OAF   O  0  1  N  N  N  12.902  15.374  -63.093  -2.859   2.192  -0.728  OAF   CX9  20  
CX9  CAV   CAV   C  0  1  Y  N  N  10.853  14.576  -63.668  -4.441   0.902   0.404  CAV   CX9  21  
CX9  NAX   NAX   N  0  1  Y  N  N  10.936  14.455  -64.995  -5.303   1.751   1.015  NAX   CX9  22  
CX9  CAT   CAT   C  0  1  Y  N  N   9.560  14.160  -63.304  -4.852  -0.391   0.701  CAT   CX9  23  
CX9  CAJ   CAJ   C  0  1  Y  N  N   9.771  13.978  -65.467  -6.199   1.059   1.656  CAJ   CX9  24  
CX9  NAN   NAN   N  0  1  Y  N  N   8.933  13.801  -64.436  -5.955  -0.273   1.486  NAN   CX9  25  
CX9  NAZ   NAZ   N  0  1  N  N  N   9.157  14.180  -61.929  -4.142  -1.454   0.191  NAZ   CX9  26  
CX9  CAD   CAD   C  0  1  N  N  N   7.780  13.746  -61.520  -4.570  -2.822   0.493  CAD   CX9  27  
CX9  OAH   OAH   O  0  1  N  N  N   9.753  14.665  -59.759  -2.458  -2.217  -1.011  OAH   CX9  28  
CX9  HAA   HAA   H  0  1  N  N  N  13.938  12.544  -67.048   5.450  -3.334  -0.377  HAA   CX9  29  
CX9  HAAA  HAAA  H  0  0  N  N  N  14.519  13.386  -65.571   5.308  -3.585   1.380  HAAA  CX9  30  
CX9  HAAB  HAAB  H  0  0  N  N  N  15.045  11.702  -65.911   3.843  -3.385   0.388  HAAB  CX9  31  
CX9  H8    H8    H  0  1  N  N  N  12.008  10.969  -66.887   6.688  -1.407   1.968  H8    CX9  32  
CX9  HAC   HAC   H  0  1  N  N  N   9.457  10.365  -61.221   4.934   3.423   0.070  HAC   CX9  33  
CX9  HACA  HACA  H  0  0  N  N  N   8.839  11.151  -62.714   3.378   3.657   0.904  HACA  CX9  34  
CX9  HACB  HACB  H  0  0  N  N  N   9.706   9.581  -62.818   4.740   2.890   1.757  HACB  CX9  35  
CX9  HAK   HAK   H  0  1  N  N  N  12.905  12.996  -59.425   0.979   1.262  -2.317  HAK   CX9  36  
CX9  HAKA  HAKA  H  0  0  N  N  N  14.537  12.772  -60.242   1.130  -0.509  -2.418  HAKA  CX9  37  
CX9  HAL   HAL   H  0  1  N  N  N  14.375  15.081  -59.597  -0.102  -0.737  -0.279  HAL   CX9  38  
CX9  HALA  HALA  H  0  0  N  N  N  14.124  14.975  -61.405  -0.254   1.034  -0.177  HALA  CX9  39  
CX9  HA0   HA0   H  0  1  N  N  N  11.965  15.359  -59.287  -1.511   1.049  -2.314  HA0   CX9  40  
CX9  HA0A  HA0A  H  0  0  N  N  N  12.591  16.603  -60.434  -1.360  -0.722  -2.416  HA0A  CX9  41  
CX9  HAJ   HAJ   H  0  1  N  N  N   9.548  13.772  -66.503  -7.012   1.474   2.233  HAJ   CX9  42  
CX9  HNAN  HNAN  H  0  0  N  N  N   7.996  13.458  -64.499  -6.474  -1.003   1.858  HNAN  CX9  43  
CX9  HAD   HAD   H  0  1  N  N  N   7.738  13.640  -60.426  -3.895  -3.529   0.011  HAD   CX9  44  
CX9  HADA  HADA  H  0  0  N  N  N   7.047  14.500  -61.843  -4.550  -2.979   1.572  HADA  CX9  45  
CX9  HADB  HADB  H  0  0  N  N  N   7.545  12.780  -61.991  -5.583  -2.976   0.123  HADB  CX9  46  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CX9  O6   C6    DOUB  N  N   1  
CX9  C6   C5    SING  N  N   2  
CX9  C6   N1    SING  N  N   3  
CX9  C5   N7    SING  Y  N   4  
CX9  C5   C4    DOUB  Y  N   5  
CX9  N1   C2    SING  N  N   6  
CX9  N1   CAK   SING  N  N   7  
CX9  N7   CAA   SING  N  N   8  
CX9  N7   C8    SING  Y  N   9  
CX9  C4   N9    SING  Y  N  10  
CX9  C4   N3    SING  N  N  11  
CX9  CAA  HAA   SING  N  N  12  
CX9  CAA  HAAA  SING  N  N  13  
CX9  CAA  HAAB  SING  N  N  14  
CX9  C8   N9    DOUB  Y  N  15  
CX9  C8   H8    SING  N  N  16  
CX9  N3   CAC   SING  N  N  17  
CX9  N3   C2    SING  N  N  18  
CX9  CAC  HAC   SING  N  N  19  
CX9  CAC  HACA  SING  N  N  20  
CX9  CAC  HACB  SING  N  N  21  
CX9  C2   O2    DOUB  N  N  22  
CX9  CAK  CAL   SING  N  N  23  
CX9  CAK  HAK   SING  N  N  24  
CX9  CAK  HAKA  SING  N  N  25  
CX9  CAL  CA0   SING  N  N  26  
CX9  CAL  HAL   SING  N  N  27  
CX9  CAL  HALA  SING  N  N  28  
CX9  CA0  N10   SING  N  N  29  
CX9  CA0  HA0   SING  N  N  30  
CX9  CA0  HA0A  SING  N  N  31  
CX9  N10  CAP   SING  N  N  32  
CX9  N10  CAR   SING  N  N  33  
CX9  CAP  OAF   DOUB  N  N  34  
CX9  CAP  CAV   SING  N  N  35  
CX9  CAR  NAZ   SING  N  N  36  
CX9  CAR  OAH   DOUB  N  N  37  
CX9  CAV  NAX   SING  Y  N  38  
CX9  CAV  CAT   DOUB  Y  N  39  
CX9  NAX  CAJ   DOUB  Y  N  40  
CX9  CAT  NAN   SING  Y  N  41  
CX9  CAT  NAZ   SING  N  N  42  
CX9  CAJ  NAN   SING  Y  N  43  
CX9  CAJ  HAJ   SING  N  N  44  
CX9  NAN  HNAN  SING  N  N  45  
CX9  NAZ  CAD   SING  N  N  46  
CX9  CAD  HAD   SING  N  N  47  
CX9  CAD  HADA  SING  N  N  48  
CX9  CAD  HADB  SING  N  N  49  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CX9  SMILES_CANONICAL  CACTVS                3.352  "Cn1cnc2N(C)C(=O)N(CCCN3C(=O)N(C)c4[nH]cnc4C3=O)C(=O)c12"  
CX9  SMILES            CACTVS                3.352  "Cn1cnc2N(C)C(=O)N(CCCN3C(=O)N(C)c4[nH]cnc4C3=O)C(=O)c12"  
CX9  SMILES_CANONICAL  "OpenEye OEToolkits"  1.6.1  "Cn1cnc2c1C(=O)N(C(=O)N2C)CCCN3C(=O)c4c([nH]cn4)N(C3=O)C"  
CX9  SMILES            "OpenEye OEToolkits"  1.6.1  "Cn1cnc2c1C(=O)N(C(=O)N2C)CCCN3C(=O)c4c([nH]cn4)N(C3=O)C"  
CX9  InChI             InChI                 1.03   "InChI=1S/C16H18N8O4/c1-20-8-19-12-10(20)14(26)24(16(28)22(12)3)6-4-5-23-13(25)9-11(18-7-17-9)21(2)15(23)27/h7-8H,4-6H2,1-3H3,(H,17,18)"  
CX9  InChIKey          InChI                 1.03   PUHJHZQYIBJCSQ-UHFFFAOYSA-N  
#
_pdbx_chem_comp_identifier.comp_id          CX9
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  1.6.1
_pdbx_chem_comp_identifier.identifier       "3,7-dimethyl-1-[3-(3-methyl-2,6-dioxo-9H-purin-1-yl)propyl]purine-2,6-dione"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CX9  "Create component"   2011-03-10  EBI   
CX9  "Modify descriptor"  2011-06-04  RCSB  
CX9  "Modify synonyms"    2020-06-05  PDBE  
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  CX9  "BISDIONIN F"                                                                                                            ?  ?  
2  CX9  "3,7-DIMETHYL-1-[3-(3-METHYL-2,6-DIOXO-2,3,6,7-TETRAHYDRO-1H-PURIN-1-YL)PROPYL]-2,3,6,7-TETRAHYDRO-1H-PURINE-2,6-DIONE"  ?  ?  
##
