data_9C9
# 
_chem_comp.id                                    9C9 
_chem_comp.name                                  "2-[(3Z,6R)-6-[(2,6-dichlorophenyl)methyl]-3-(dimethylhydrazinylidene)-7-oxo-1,4-diazepan-1-yl]-N-[3-(1-methyl-1H-pyrazol-4-yl)phenyl]acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H29 Cl2 N7 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-03-13 
_chem_comp.pdbx_modified_date                    2018-06-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        542.460 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9C9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ZFI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9C9 C1  C1  C  0 1 N N N -10.969 24.766 51.586 2.547   -0.366 -1.398 C1  9C9 1  
9C9 O2  O1  O  0 1 N N N -10.657 24.473 50.428 2.039   -0.723 -2.440 O2  9C9 2  
9C9 CL1 CL1 CL 0 0 N N N -10.433 21.192 54.321 2.432   -0.592 3.165  CL1 9C9 3  
9C9 C6  C2  C  0 1 Y N N -11.973 20.673 53.601 1.620   -1.565 1.978  C6  9C9 4  
9C9 C7  C3  C  0 1 Y N N -12.645 19.612 54.185 0.329   -2.004 2.209  C7  9C9 5  
9C9 C8  C4  C  0 1 Y N N -13.831 19.152 53.645 -0.318  -2.778 1.264  C8  9C9 6  
9C9 C9  C5  C  0 1 Y N N -14.375 19.807 52.552 0.326   -3.115 0.088  C9  9C9 7  
9C9 C10 C6  C  0 1 Y N N -13.685 20.861 51.960 1.617   -2.676 -0.144 C10 9C9 8  
9C9 CL2 CL2 CL 0 0 N N N -14.390 21.692 50.575 2.422   -3.093 -1.625 CL2 9C9 9  
9C9 C5  C7  C  0 1 Y N N -12.516 21.341 52.506 2.263   -1.897 0.799  C5  9C9 10 
9C9 C4  C8  C  0 1 N N N -11.734 22.422 51.755 3.670   -1.419 0.547  C4  9C9 11 
9C9 C3  C9  C  0 1 N N R -11.729 23.795 52.431 3.818   -1.022 -0.923 C3  9C9 12 
9C9 C11 C10 C  0 1 N N N -13.134 24.243 52.648 4.981   -0.036 -1.072 C11 9C9 13 
9C9 N12 N1  N  0 1 N N N -13.297 25.321 53.591 5.000   0.863  0.086  N12 9C9 14 
9C9 C13 C11 C  0 1 N N N -12.454 26.330 53.824 3.894   1.659  0.365  C13 9C9 15 
9C9 N14 N2  N  0 1 N N N -12.923 27.286 54.502 4.010   2.945  0.411  N14 9C9 16 
9C9 N62 N3  N  0 1 N N N -14.219 27.176 54.878 5.227   3.552  0.075  N62 9C9 17 
9C9 C63 C12 C  0 1 N N N -15.122 28.187 54.290 5.939   4.364  1.065  C63 9C9 18 
9C9 C68 C13 C  0 1 N N N -14.337 27.108 56.351 5.787   3.375  -1.267 C68 9C9 19 
9C9 C15 C14 C  0 1 N N N -10.936 26.258 53.562 2.557   1.002  0.613  C15 9C9 20 
9C9 N16 N4  N  0 1 N N N -10.597 25.909 52.163 1.973   0.615  -0.678 N16 9C9 21 
9C9 C17 C15 C  0 1 N N N -9.737  26.859 51.436 0.775   1.293  -1.179 C17 9C9 22 
9C9 C19 C16 C  0 1 N N N -8.446  26.155 50.973 -0.444  0.470  -0.847 C19 9C9 23 
9C9 O30 O2  O  0 1 N N N -7.951  25.278 51.667 -0.321  -0.589 -0.268 O30 9C9 24 
9C9 N20 N5  N  0 1 N N N -7.907  26.570 49.799 -1.669  0.911  -1.194 N20 9C9 25 
9C9 C21 C17 C  0 1 Y N N -6.773  25.989 49.240 -2.806  0.191  -0.809 C21 9C9 26 
9C9 C25 C18 C  0 1 Y N N -5.844  25.231 49.994 -4.017  0.845  -0.640 C25 9C9 27 
9C9 C26 C19 C  0 1 Y N N -4.743  24.633 49.354 -5.145  0.126  -0.257 C26 9C9 28 
9C9 C27 C20 C  0 1 Y N N -4.542  24.825 47.989 -5.052  -1.248 -0.045 C27 9C9 29 
9C9 C28 C21 C  0 1 Y N N -5.446  25.571 47.249 -3.842  -1.893 -0.215 C28 9C9 30 
9C9 C29 C22 C  0 1 Y N N -6.542  26.165 47.870 -2.723  -1.180 -0.601 C29 9C9 31 
9C9 C60 C23 C  0 1 Y N N -3.740  23.830 50.124 -6.445  0.820  -0.075 C60 9C9 32 
9C9 C64 C24 C  0 1 Y N N -3.995  22.968 51.202 -6.685  2.197  -0.253 C64 9C9 33 
9C9 N63 N6  N  0 1 Y N N -2.813  22.427 51.597 -7.947  2.424  -0.000 N63 9C9 34 
9C9 N71 N7  N  0 1 Y N N -1.845  22.949 50.733 -8.557  1.213  0.347  N71 9C9 35 
9C9 C67 C25 C  0 1 N N N -0.448  22.499 50.987 -9.966  1.032  0.704  C67 9C9 36 
9C9 C61 C26 C  0 1 Y N N -2.375  23.789 49.859 -7.624  0.240  0.290  C61 9C9 37 
9C9 H1  H1  H  0 1 N N N -12.239 19.141 55.068 -0.174  -1.742 3.128  H1  9C9 38 
9C9 H2  H2  H  0 1 N N N -14.328 18.292 54.070 -1.326  -3.120 1.445  H2  9C9 39 
9C9 H3  H3  H  0 1 N N N -15.333 19.500 52.160 -0.180  -3.720 -0.650 H3  9C9 40 
9C9 H4  H4  H  0 1 N N N -12.179 22.534 50.755 3.879   -0.557 1.179  H4  9C9 41 
9C9 H5  H5  H  0 1 N N N -10.692 22.085 51.657 4.372   -2.220 0.780  H5  9C9 42 
9C9 H6  H6  H  0 1 N N N -11.228 23.702 53.406 4.014   -1.911 -1.523 H6  9C9 43 
9C9 H7  H7  H  0 1 N N N -13.539 24.574 51.680 5.920   -0.586 -1.123 H7  9C9 44 
9C9 H8  H8  H  0 1 N N N -13.713 23.382 53.013 4.849   0.547  -1.984 H8  9C9 45 
9C9 H9  H9  H  0 1 N N N -14.138 25.312 54.133 5.784   0.903  0.657  H9  9C9 46 
9C9 H10 H10 H  0 1 N N N -16.147 28.018 54.651 6.621   3.730  1.632  H10 9C9 47 
9C9 H11 H11 H  0 1 N N N -14.790 29.193 54.587 6.506   5.143  0.557  H11 9C9 48 
9C9 H12 H12 H  0 1 N N N -15.101 28.103 53.193 5.220   4.822  1.744  H12 9C9 49 
9C9 H13 H13 H  0 1 N N N -13.648 26.344 56.740 5.494   4.215  -1.897 H13 9C9 50 
9C9 H14 H14 H  0 1 N N N -14.082 28.086 56.785 6.875   3.331  -1.203 H14 9C9 51 
9C9 H15 H15 H  0 1 N N N -15.369 26.843 56.624 5.410   2.448  -1.699 H15 9C9 52 
9C9 H16 H16 H  0 1 N N N -10.503 25.496 54.226 2.695   0.116  1.232  H16 9C9 53 
9C9 H17 H17 H  0 1 N N N -10.495 27.239 53.793 1.894   1.703  1.120  H17 9C9 54 
9C9 H18 H18 H  0 1 N N N -9.477  27.696 52.100 0.689   2.273  -0.711 H18 9C9 55 
9C9 H19 H19 H  0 1 N N N -10.278 27.242 50.558 0.849   1.412  -2.260 H19 9C9 56 
9C9 H20 H20 H  0 1 N N N -8.344  27.327 49.314 -1.763  1.727  -1.709 H20 9C9 57 
9C9 H21 H21 H  0 1 N N N -5.981  25.112 51.059 -4.084  1.911  -0.805 H21 9C9 58 
9C9 H22 H22 H  0 1 N N N -3.679  24.391 47.506 -5.926  -1.809 0.252  H22 9C9 59 
9C9 H23 H23 H  0 1 N N N -5.300  25.692 46.186 -3.773  -2.959 -0.054 H23 9C9 60 
9C9 H24 H24 H  0 1 N N N -7.222  26.769 47.288 -1.780  -1.689 -0.733 H24 9C9 61 
9C9 H25 H25 H  0 1 N N N -4.962  22.770 51.641 -5.954  2.935  -0.547 H25 9C9 62 
9C9 H26 H26 H  0 1 N N N -0.434  21.810 51.844 -10.544 0.820  -0.196 H26 9C9 63 
9C9 H27 H27 H  0 1 N N N -0.061  21.983 50.096 -10.060 0.200  1.401  H27 9C9 64 
9C9 H28 H28 H  0 1 N N N 0.184   23.372 51.209 -10.342 1.942  1.171  H28 9C9 65 
9C9 H29 H29 H  0 1 N N N -1.850  24.336 49.090 -7.782  -0.808 0.499  H29 9C9 66 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9C9 C28 C29 DOUB Y N 1  
9C9 C28 C27 SING Y N 2  
9C9 C29 C21 SING Y N 3  
9C9 C27 C26 DOUB Y N 4  
9C9 C21 N20 SING N N 5  
9C9 C21 C25 DOUB Y N 6  
9C9 C26 C25 SING Y N 7  
9C9 C26 C60 SING N N 8  
9C9 N20 C19 SING N N 9  
9C9 C61 C60 DOUB Y N 10 
9C9 C61 N71 SING Y N 11 
9C9 C60 C64 SING Y N 12 
9C9 O2  C1  DOUB N N 13 
9C9 CL2 C10 SING N N 14 
9C9 N71 C67 SING N N 15 
9C9 N71 N63 SING Y N 16 
9C9 C19 C17 SING N N 17 
9C9 C19 O30 DOUB N N 18 
9C9 C64 N63 DOUB Y N 19 
9C9 C17 N16 SING N N 20 
9C9 C1  N16 SING N N 21 
9C9 C1  C3  SING N N 22 
9C9 C4  C3  SING N N 23 
9C9 C4  C5  SING N N 24 
9C9 C10 C5  DOUB Y N 25 
9C9 C10 C9  SING Y N 26 
9C9 N16 C15 SING N N 27 
9C9 C3  C11 SING N N 28 
9C9 C5  C6  SING Y N 29 
9C9 C9  C8  DOUB Y N 30 
9C9 C11 N12 SING N N 31 
9C9 C15 C13 SING N N 32 
9C9 N12 C13 SING N N 33 
9C9 C6  C7  DOUB Y N 34 
9C9 C6  CL1 SING N N 35 
9C9 C8  C7  SING Y N 36 
9C9 C13 N14 DOUB N Z 37 
9C9 C63 N62 SING N N 38 
9C9 N14 N62 SING N N 39 
9C9 N62 C68 SING N N 40 
9C9 C7  H1  SING N N 41 
9C9 C8  H2  SING N N 42 
9C9 C9  H3  SING N N 43 
9C9 C4  H4  SING N N 44 
9C9 C4  H5  SING N N 45 
9C9 C3  H6  SING N N 46 
9C9 C11 H7  SING N N 47 
9C9 C11 H8  SING N N 48 
9C9 N12 H9  SING N N 49 
9C9 C63 H10 SING N N 50 
9C9 C63 H11 SING N N 51 
9C9 C63 H12 SING N N 52 
9C9 C68 H13 SING N N 53 
9C9 C68 H14 SING N N 54 
9C9 C68 H15 SING N N 55 
9C9 C15 H16 SING N N 56 
9C9 C15 H17 SING N N 57 
9C9 C17 H18 SING N N 58 
9C9 C17 H19 SING N N 59 
9C9 N20 H20 SING N N 60 
9C9 C25 H21 SING N N 61 
9C9 C27 H22 SING N N 62 
9C9 C28 H23 SING N N 63 
9C9 C29 H24 SING N N 64 
9C9 C64 H25 SING N N 65 
9C9 C67 H26 SING N N 66 
9C9 C67 H27 SING N N 67 
9C9 C67 H28 SING N N 68 
9C9 C61 H29 SING N N 69 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9C9 SMILES           ACDLabs              12.01 "C1(N(CC(/NCC1Cc2c(Cl)cccc2Cl)=N/N(C)C)CC(=O)Nc4cc(c3cnn(C)c3)ccc4)=O"                                                                                                                                        
9C9 InChI            InChI                1.03  "InChI=1S/C26H29Cl2N7O2/c1-33(2)32-24-15-35(26(37)18(12-29-24)11-21-22(27)8-5-9-23(21)28)16-25(36)31-20-7-4-6-17(10-20)19-13-30-34(3)14-19/h4-10,13-14,18H,11-12,15-16H2,1-3H3,(H,29,32)(H,31,36)/t18-/m1/s1" 
9C9 InChIKey         InChI                1.03  GKZIYEBJQVXMQL-GOSISDBHSA-N                                                                                                                                                                                   
9C9 SMILES_CANONICAL CACTVS               3.385 "CN(C)\N=C/1CN(CC(=O)Nc2cccc(c2)c3cnn(C)c3)C(=O)[C@@H](CN/1)Cc4c(Cl)cccc4Cl"                                                                                                                                  
9C9 SMILES           CACTVS               3.385 "CN(C)N=C1CN(CC(=O)Nc2cccc(c2)c3cnn(C)c3)C(=O)[CH](CN1)Cc4c(Cl)cccc4Cl"                                                                                                                                       
9C9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cn1cc(cn1)c2cccc(c2)NC(=O)CN3C/C(=N/N(C)C)/NC[C@H](C3=O)Cc4c(cccc4Cl)Cl"                                                                                                                                     
9C9 SMILES           "OpenEye OEToolkits" 2.0.6 "Cn1cc(cn1)c2cccc(c2)NC(=O)CN3CC(=NN(C)C)NCC(C3=O)Cc4c(cccc4Cl)Cl"                                                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9C9 "SYSTEMATIC NAME" ACDLabs              12.01 "2-[(3Z,6R)-6-[(2,6-dichlorophenyl)methyl]-3-(dimethylhydrazinylidene)-7-oxo-1,4-diazepan-1-yl]-N-[3-(1-methyl-1H-pyrazol-4-yl)phenyl]acetamide"                       
9C9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(3~{Z},6~{R})-6-[[2,6-bis(chloranyl)phenyl]methyl]-3-(dimethylhydrazinylidene)-7-oxidanylidene-1,4-diazepan-1-yl]-~{N}-[3-(1-methylpyrazol-4-yl)phenyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9C9 "Create component" 2018-03-13 PDBJ 
9C9 "Initial release"  2018-06-27 RCSB 
# 
