data_8V9
# 
_chem_comp.id                                    8V9 
_chem_comp.name                                  
"(4R)-3-[(2S,3S)-3-[[(2R)-2-[2-(4-hydroxyphenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-N-[(1S,2R)-2-oxidanyl-2,3-dihydro-1H-inden-1-yl]-1,3-thiazolidine-4-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C37 H44 N4 O7 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-10-04 
_chem_comp.pdbx_modified_date                    2018-07-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        720.898 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8V9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5YIA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8V9 C34 C1  C 0 1 Y N N 22.871 -20.351 -25.626 -8.209  2.015  -1.075 C34 8V9 1  
8V9 C35 C2  C 0 1 Y N N 20.850 -18.950 -27.117 -10.205 0.196  -0.465 C35 8V9 2  
8V9 C36 C3  C 0 1 Y N N 22.399 -19.178 -25.188 -9.457  2.467  -0.692 C36 8V9 3  
8V9 C37 C4  C 0 1 Y N N 21.310 -18.429 -25.991 -10.459 1.557  -0.386 C37 8V9 4  
8V9 C32 C5  C 0 1 Y N N 22.336 -20.958 -26.932 -7.960  0.658  -1.159 C32 8V9 5  
8V9 C27 C6  C 0 1 Y N N 16.303 -22.950 -27.810 -0.340  2.445  -2.515 C27 8V9 6  
8V9 C28 C7  C 0 1 Y N N 15.521 -22.099 -27.160 -1.562  3.023  -2.226 C28 8V9 7  
8V9 C30 C8  C 0 1 N N N 22.886 -22.324 -27.459 -6.597  0.168  -1.577 C30 8V9 8  
8V9 C29 C9  C 0 1 N N N 21.815 -23.461 -27.310 -5.729  -0.003 -0.357 C29 8V9 9  
8V9 C10 C10 C 0 1 N N N 12.304 -23.114 -18.387 8.764   1.316  -0.284 C10 8V9 10 
8V9 S01 S1  S 0 1 N N N 19.359 -26.149 -19.766 2.933   -3.813 -1.450 S01 8V9 11 
8V9 S02 S2  S 0 1 N N N 23.119 -27.542 -26.573 -5.610  -2.123 1.787  S02 8V9 12 
8V9 O01 O1  O 0 1 N N N 12.573 -25.467 -18.329 8.033   0.004  -2.217 O01 8V9 13 
8V9 O02 O2  O 0 1 N N N 16.799 -24.033 -20.090 3.850   0.419  -0.590 O02 8V9 14 
8V9 O03 O3  O 0 1 N N N 17.772 -28.489 -24.630 0.978   -0.610 3.140  O03 8V9 15 
8V9 O04 O4  O 0 1 N N N 16.051 -27.946 -22.604 3.350   -0.648 2.056  O04 8V9 16 
8V9 O05 O5  O 0 1 N N N 20.246 -24.763 -24.374 -1.867  -0.280 -0.855 O05 8V9 17 
8V9 O06 O6  O 0 1 N N N 20.741 -23.418 -27.834 -6.173  0.248  0.743  O06 8V9 18 
8V9 O07 O7  O 0 1 N N N 20.796 -17.192 -25.527 -11.688 1.999  -0.010 O07 8V9 19 
8V9 N01 N1  N 0 1 N N N 17.509 -26.492 -21.534 2.859   -1.862 0.265  N01 8V9 20 
8V9 N02 N2  N 0 1 N N N 14.857 -25.002 -19.397 5.987   -0.178 -0.574 N02 8V9 21 
8V9 N03 N3  N 0 1 N N N 18.810 -26.080 -25.670 -1.201  -0.604 1.236  N03 8V9 22 
8V9 N04 N4  N 0 1 N N N 22.157 -24.621 -26.502 -4.459  -0.435 -0.489 N04 8V9 23 
8V9 C01 C11 C 0 1 N N R 16.775 -26.424 -20.280 4.228   -1.882 -0.228 C01 8V9 24 
8V9 C02 C12 C 0 1 N N N 17.788 -26.941 -19.234 4.392   -2.691 -1.534 C02 8V9 25 
8V9 C03 C13 C 0 1 N N S 14.276 -23.835 -18.991 6.420   1.201  -0.816 C03 8V9 26 
8V9 C04 C14 C 0 1 N N N 18.778 -25.694 -21.423 1.881   -2.586 -0.570 C04 8V9 27 
8V9 C05 C15 C 0 1 N N N 16.194 -25.034 -19.957 4.674   -0.464 -0.477 C05 8V9 28 
8V9 C06 C16 C 0 1 N N R 13.162 -24.098 -18.043 7.808   1.215  -1.492 C06 8V9 29 
8V9 C07 C17 C 0 1 N N N 17.927 -28.468 -19.402 5.699   -3.487 -1.528 C07 8V9 30 
8V9 C08 C18 C 0 1 N N N 17.462 -26.542 -17.777 4.313   -1.779 -2.760 C08 8V9 31 
8V9 C09 C19 C 0 1 Y N N 13.498 -23.131 -20.294 6.611   1.929  0.497  C09 8V9 32 
8V9 C11 C20 C 0 1 Y N N 12.220 -22.715 -19.733 7.958   1.996  0.803  C11 8V9 33 
8V9 C12 C21 C 0 1 N N N 17.081 -27.330 -22.666 2.510   -1.229 1.403  C12 8V9 34 
8V9 C13 C22 C 0 1 N N S 17.981 -27.333 -23.920 1.075   -1.243 1.863  C13 8V9 35 
8V9 C14 C23 C 0 1 N N S 17.694 -26.045 -24.746 0.208   -0.488 0.853  C14 8V9 36 
8V9 C15 C24 C 0 1 Y N N 13.723 -22.910 -21.603 5.681   2.490  1.355  C15 8V9 37 
8V9 C16 C25 C 0 1 Y N N 11.200 -21.995 -20.752 8.370   2.623  1.966  C16 8V9 38 
8V9 C17 C26 C 0 1 N N N 16.344 -26.106 -25.470 0.613   0.987  0.835  C17 8V9 39 
8V9 C18 C27 C 0 1 Y N N 12.927 -22.337 -22.396 6.094   3.115  2.516  C18 8V9 40 
8V9 C19 C28 C 0 1 Y N N 11.684 -21.849 -22.159 7.440   3.182  2.822  C19 8V9 41 
8V9 C20 C29 C 0 1 Y N N 16.041 -24.677 -26.062 -0.154  1.706  -0.245 C20 8V9 42 
8V9 C22 C30 C 0 1 N N R 21.192 -25.669 -26.366 -3.615  -0.602 0.697  C22 8V9 43 
8V9 C23 C31 C 0 1 Y N N 15.136 -23.699 -25.309 -1.377  2.283  0.043  C23 8V9 44 
8V9 C24 C32 C 0 1 Y N N 16.583 -24.339 -27.210 0.364   1.786  -1.524 C24 8V9 45 
8V9 C25 C33 C 0 1 N N N 21.816 -26.830 -25.650 -3.866  -1.980 1.312  C25 8V9 46 
8V9 C26 C34 C 0 1 Y N N 14.894 -22.488 -25.837 -2.080  2.942  -0.948 C26 8V9 47 
8V9 C31 C35 C 0 1 N N N 22.589 -27.976 -28.201 -5.708  -3.795 2.484  C31 8V9 48 
8V9 C33 C36 C 0 1 Y N N 21.395 -20.305 -27.630 -8.958  -0.251 -0.859 C33 8V9 49 
8V9 C21 C37 C 0 1 N N N 20.065 -25.383 -25.375 -2.166  -0.484 0.303  C21 8V9 50 
8V9 H1  H1  H 0 1 N N N 23.629 -20.872 -25.060 -7.429  2.723  -1.314 H1  8V9 51 
8V9 H2  H2  H 0 1 N N N 20.091 -18.428 -27.681 -10.983 -0.514 -0.228 H2  8V9 52 
8V9 H3  H3  H 0 1 N N N 22.780 -18.753 -24.271 -9.653  3.527  -0.631 H3  8V9 53 
8V9 H4  H4  H 0 1 N N N 16.741 -22.669 -28.756 0.063   2.504  -3.515 H4  8V9 54 
8V9 H5  H5  H 0 1 N N N 15.330 -21.121 -27.577 -2.112  3.538  -3.000 H5  8V9 55 
8V9 H6  H6  H 0 1 N N N 23.782 -22.597 -26.882 -6.697  -0.789 -2.089 H6  8V9 56 
8V9 H7  H7  H 0 1 N N N 23.152 -22.218 -28.521 -6.140  0.894  -2.249 H7  8V9 57 
8V9 H8  H8  H 0 1 N N N 12.586 -22.224 -17.805 9.071   0.322  0.040  H8  8V9 58 
8V9 H9  H9  H 0 1 N N N 11.299 -23.445 -18.087 9.636   1.916  -0.541 H9  8V9 59 
8V9 H10 H10 H 0 1 N N N 11.860 -25.638 -17.725 8.922   -0.073 -2.588 H10 8V9 60 
8V9 H11 H11 H 0 1 N N N 17.014 -28.943 -24.280 1.270   0.312  3.146  H11 8V9 61 
8V9 H12 H12 H 0 1 N N N 21.225 -16.956 -24.713 -11.785 2.126  0.944  H12 8V9 62 
8V9 H13 H13 H 0 1 N N N 14.347 -25.857 -19.306 6.645   -0.884 -0.483 H13 8V9 63 
8V9 H14 H14 H 0 1 N N N 18.722 -26.590 -26.526 -1.440  -0.766 2.162  H14 8V9 64 
8V9 H15 H15 H 0 1 N N N 23.047 -24.685 -26.051 -4.104  -0.637 -1.369 H15 8V9 65 
8V9 H16 H16 H 0 1 N N N 15.939 -27.137 -20.318 4.869   -2.321 0.536  H16 8V9 66 
8V9 H17 H17 H 0 1 N N N 14.994 -23.114 -18.574 5.692   1.722  -1.437 H17 8V9 67 
8V9 H18 H18 H 0 1 N N N 19.504 -25.986 -22.196 1.402   -1.910 -1.278 H18 8V9 68 
8V9 H19 H19 H 0 1 N N N 18.580 -24.614 -21.495 1.139   -3.088 0.051  H19 8V9 69 
8V9 H20 H20 H 0 1 N N N 13.505 -24.033 -17.000 7.916   2.081  -2.145 H20 8V9 70 
8V9 H21 H21 H 0 1 N N N 18.646 -28.855 -18.664 5.733   -4.136 -2.403 H21 8V9 71 
8V9 H22 H22 H 0 1 N N N 16.948 -28.945 -19.245 6.543   -2.798 -1.552 H22 8V9 72 
8V9 H23 H23 H 0 1 N N N 18.286 -28.694 -20.417 5.750   -4.093 -0.624 H23 8V9 73 
8V9 H24 H24 H 0 1 N N N 18.231 -26.950 -17.104 3.396   -1.191 -2.717 H24 8V9 74 
8V9 H25 H25 H 0 1 N N N 17.445 -25.445 -17.692 5.173   -1.109 -2.770 H25 8V9 75 
8V9 H26 H26 H 0 1 N N N 16.478 -26.947 -17.498 4.313   -2.385 -3.665 H26 8V9 76 
8V9 H27 H27 H 0 1 N N N 19.026 -27.284 -23.581 0.728   -2.274 1.940  H27 8V9 77 
8V9 H28 H28 H 0 1 N N N 17.738 -25.161 -24.093 0.350   -0.916 -0.140 H28 8V9 78 
8V9 H29 H29 H 0 1 N N N 14.664 -23.252 -22.008 4.629   2.439  1.117  H29 8V9 79 
8V9 H30 H30 H 0 1 N N N 10.229 -21.641 -20.439 9.422   2.675  2.206  H30 8V9 80 
8V9 H31 H31 H 0 1 N N N 15.553 -26.391 -24.761 0.387   1.437  1.802  H31 8V9 81 
8V9 H32 H32 H 0 1 N N N 16.390 -26.845 -26.284 1.682   1.068  0.637  H32 8V9 82 
8V9 H33 H33 H 0 1 N N N 13.286 -22.218 -23.408 5.366   3.552  3.183  H33 8V9 83 
8V9 H34 H34 H 0 1 N N N 11.086 -21.388 -22.931 7.765   3.670  3.728  H34 8V9 84 
8V9 H35 H35 H 0 1 N N N 20.782 -25.981 -27.338 -3.858  0.171  1.427  H35 8V9 85 
8V9 H36 H36 H 0 1 N N N 14.697 -23.980 -24.363 -1.782  2.220  1.042  H36 8V9 86 
8V9 H37 H37 H 0 1 N N N 17.224 -25.035 -27.732 1.319   1.335  -1.749 H37 8V9 87 
8V9 H38 H38 H 0 1 N N N 21.045 -27.595 -25.474 -3.238  -2.104 2.194  H38 8V9 88 
8V9 H39 H39 H 0 1 N N N 22.213 -26.481 -24.685 -3.623  -2.753 0.582  H39 8V9 89 
8V9 H40 H40 H 0 1 N N N 14.252 -21.791 -25.318 -3.035  3.395  -0.722 H40 8V9 90 
8V9 H41 H41 H 0 1 N N N 23.429 -28.420 -28.755 -5.420  -4.522 1.724  H41 8V9 91 
8V9 H42 H42 H 0 1 N N N 21.767 -28.704 -28.137 -5.034  -3.873 3.336  H42 8V9 92 
8V9 H43 H43 H 0 1 N N N 22.240 -27.074 -28.726 -6.730  -3.994 2.808  H43 8V9 93 
8V9 H44 H44 H 0 1 N N N 21.017 -20.725 -28.551 -8.759  -1.311 -0.921 H44 8V9 94 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8V9 C31 S02 SING N N 1  
8V9 O06 C29 DOUB N N 2  
8V9 C27 C24 DOUB Y N 3  
8V9 C27 C28 SING Y N 4  
8V9 C33 C35 DOUB Y N 5  
8V9 C33 C32 SING Y N 6  
8V9 C30 C29 SING N N 7  
8V9 C30 C32 SING N N 8  
8V9 C29 N04 SING N N 9  
8V9 C24 C20 SING Y N 10 
8V9 C28 C26 DOUB Y N 11 
8V9 C35 C37 SING Y N 12 
8V9 C32 C34 DOUB Y N 13 
8V9 S02 C25 SING N N 14 
8V9 N04 C22 SING N N 15 
8V9 C22 C25 SING N N 16 
8V9 C22 C21 SING N N 17 
8V9 C20 C17 SING N N 18 
8V9 C20 C23 DOUB Y N 19 
8V9 C37 O07 SING N N 20 
8V9 C37 C36 DOUB Y N 21 
8V9 C26 C23 SING Y N 22 
8V9 N03 C21 SING N N 23 
8V9 N03 C14 SING N N 24 
8V9 C34 C36 SING Y N 25 
8V9 C17 C14 SING N N 26 
8V9 C21 O05 DOUB N N 27 
8V9 C14 C13 SING N N 28 
8V9 O03 C13 SING N N 29 
8V9 C13 C12 SING N N 30 
8V9 C12 O04 DOUB N N 31 
8V9 C12 N01 SING N N 32 
8V9 C18 C19 DOUB Y N 33 
8V9 C18 C15 SING Y N 34 
8V9 C19 C16 SING Y N 35 
8V9 C15 C09 DOUB Y N 36 
8V9 N01 C04 SING N N 37 
8V9 N01 C01 SING N N 38 
8V9 C04 S01 SING N N 39 
8V9 C16 C11 DOUB Y N 40 
8V9 C09 C11 SING Y N 41 
8V9 C09 C03 SING N N 42 
8V9 C01 C05 SING N N 43 
8V9 C01 C02 SING N N 44 
8V9 O02 C05 DOUB N N 45 
8V9 C05 N02 SING N N 46 
8V9 S01 C02 SING N N 47 
8V9 C11 C10 SING N N 48 
8V9 C07 C02 SING N N 49 
8V9 N02 C03 SING N N 50 
8V9 C02 C08 SING N N 51 
8V9 C03 C06 SING N N 52 
8V9 C10 C06 SING N N 53 
8V9 O01 C06 SING N N 54 
8V9 C34 H1  SING N N 55 
8V9 C35 H2  SING N N 56 
8V9 C36 H3  SING N N 57 
8V9 C27 H4  SING N N 58 
8V9 C28 H5  SING N N 59 
8V9 C30 H6  SING N N 60 
8V9 C30 H7  SING N N 61 
8V9 C10 H8  SING N N 62 
8V9 C10 H9  SING N N 63 
8V9 O01 H10 SING N N 64 
8V9 O03 H11 SING N N 65 
8V9 O07 H12 SING N N 66 
8V9 N02 H13 SING N N 67 
8V9 N03 H14 SING N N 68 
8V9 N04 H15 SING N N 69 
8V9 C01 H16 SING N N 70 
8V9 C03 H17 SING N N 71 
8V9 C04 H18 SING N N 72 
8V9 C04 H19 SING N N 73 
8V9 C06 H20 SING N N 74 
8V9 C07 H21 SING N N 75 
8V9 C07 H22 SING N N 76 
8V9 C07 H23 SING N N 77 
8V9 C08 H24 SING N N 78 
8V9 C08 H25 SING N N 79 
8V9 C08 H26 SING N N 80 
8V9 C13 H27 SING N N 81 
8V9 C14 H28 SING N N 82 
8V9 C15 H29 SING N N 83 
8V9 C16 H30 SING N N 84 
8V9 C17 H31 SING N N 85 
8V9 C17 H32 SING N N 86 
8V9 C18 H33 SING N N 87 
8V9 C19 H34 SING N N 88 
8V9 C22 H35 SING N N 89 
8V9 C23 H36 SING N N 90 
8V9 C24 H37 SING N N 91 
8V9 C25 H38 SING N N 92 
8V9 C25 H39 SING N N 93 
8V9 C26 H40 SING N N 94 
8V9 C31 H41 SING N N 95 
8V9 C31 H42 SING N N 96 
8V9 C31 H43 SING N N 97 
8V9 C33 H44 SING N N 98 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8V9 InChI            InChI                1.03  
;InChI=1S/C37H44N4O7S2/c1-37(2)33(35(47)40-31-26-12-8-7-11-24(26)19-29(31)43)41(21-50-37)36(48)32(45)27(17-22-9-5-4-6-10-22)39-34(46)28(20-49-3)38-30(44)18-23-13-15-25(42)16-14-23/h4-16,27-29,31-33,42-43,45H,17-21H2,1-3H3,(H,38,44)(H,39,46)(H,40,47)/t27-,28-,29+,31-,32-,33+/m0/s1
;
8V9 InChIKey         InChI                1.03  OONNUXMESNYHOP-ACUZRORGSA-N 
8V9 SMILES_CANONICAL CACTVS               3.385 "CSC[C@H](NC(=O)Cc1ccc(O)cc1)C(=O)N[C@@H](Cc2ccccc2)[C@H](O)C(=O)N3CSC(C)(C)[C@H]3C(=O)N[C@@H]4[C@H](O)Cc5ccccc45" 
8V9 SMILES           CACTVS               3.385 "CSC[CH](NC(=O)Cc1ccc(O)cc1)C(=O)N[CH](Cc2ccccc2)[CH](O)C(=O)N3CSC(C)(C)[CH]3C(=O)N[CH]4[CH](O)Cc5ccccc45" 
8V9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CC1([C@H](N(CS1)C(=O)[C@H]([C@H](Cc2ccccc2)NC(=O)[C@H](CSC)NC(=O)Cc3ccc(cc3)O)O)C(=O)N[C@H]4c5ccccc5C[C@H]4O)C" 
8V9 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1(C(N(CS1)C(=O)C(C(Cc2ccccc2)NC(=O)C(CSC)NC(=O)Cc3ccc(cc3)O)O)C(=O)NC4c5ccccc5CC4O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8V9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 
"(4~{R})-3-[(2~{S},3~{S})-3-[[(2~{R})-2-[2-(4-hydroxyphenyl)ethanoylamino]-3-methylsulfanyl-propanoyl]amino]-2-oxidanyl-4-phenyl-butanoyl]-5,5-dimethyl-~{N}-[(1~{S},2~{R})-2-oxidanyl-2,3-dihydro-1~{H}-inden-1-yl]-1,3-thiazolidine-4-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8V9 "Create component" 2017-10-04 PDBJ 
8V9 "Initial release"  2018-07-11 RCSB 
# 
