data_8O9
# 
_chem_comp.id                                    8O9 
_chem_comp.name                                  "(3S)-piperidin-3-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H11 N O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(S)-3-Hydroxypiperidine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-28 
_chem_comp.pdbx_modified_date                    2022-11-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        101.147 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8O9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7Q3M 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8O9 C02 C1  C 0 1 N N S -6.332 -14.636 -18.024 -0.982 -0.034 0.337  C02 8O9 1  
8O9 C03 C2  C 0 1 N N N -6.064 -15.984 -17.379 -0.273 -1.280 -0.201 C03 8O9 2  
8O9 C04 C3  C 0 1 N N N -7.220 -16.360 -16.469 1.195  -1.249 0.230  C04 8O9 3  
8O9 C05 C4  C 0 1 N N N -7.446 -15.284 -15.409 1.846  0.037  -0.284 C05 8O9 4  
8O9 C07 C5  C 0 1 N N N -6.570 -13.562 -16.951 -0.268 1.217  -0.180 C07 8O9 5  
8O9 N06 N1  N 0 1 N N N -7.687 -13.975 -16.064 1.133  1.199  0.260  N06 8O9 6  
8O9 O01 O1  O 0 1 N N N -5.192 -14.269 -18.710 -2.340 -0.027 -0.108 O01 8O9 7  
8O9 H1  H1  H 0 1 N N N -7.209 -14.703 -18.684 -0.956 -0.043 1.427  H1  8O9 8  
8O9 H2  H2  H 0 1 N N N -5.953 -16.748 -18.163 -0.752 -2.173 0.200  H2  8O9 9  
8O9 H3  H3  H 0 1 N N N -5.138 -15.928 -16.788 -0.333 -1.291 -1.290 H3  8O9 10 
8O9 H4  H4  H 0 1 N N N -8.133 -16.470 -17.072 1.255  -1.277 1.318  H4  8O9 11 
8O9 H5  H5  H 0 1 N N N -6.992 -17.314 -15.972 1.715  -2.112 -0.186 H5  8O9 12 
8O9 H6  H6  H 0 1 N N N -8.320 -15.552 -14.797 2.888  0.069  0.034  H6  8O9 13 
8O9 H7  H7  H 0 1 N N N -6.556 -15.212 -14.766 1.798  0.058  -1.373 H7  8O9 14 
8O9 H8  H8  H 0 1 N N N -5.656 -13.435 -16.352 -0.306 1.232  -1.270 H8  8O9 15 
8O9 H9  H9  H 0 1 N N N -6.824 -12.609 -17.438 -0.761 2.105  0.213  H9  8O9 16 
8O9 H10 H10 H 0 1 N N N -7.806 -13.280 -15.355 1.600  2.059  0.012  H10 8O9 17 
8O9 H12 H12 H 0 1 N N N -5.330 -13.426 -19.126 -2.850 0.736  0.196  H12 8O9 18 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8O9 O01 C02 SING N N 1  
8O9 C02 C03 SING N N 2  
8O9 C02 C07 SING N N 3  
8O9 C03 C04 SING N N 4  
8O9 C07 N06 SING N N 5  
8O9 C04 C05 SING N N 6  
8O9 N06 C05 SING N N 7  
8O9 C02 H1  SING N N 8  
8O9 C03 H2  SING N N 9  
8O9 C03 H3  SING N N 10 
8O9 C04 H4  SING N N 11 
8O9 C04 H5  SING N N 12 
8O9 C05 H6  SING N N 13 
8O9 C05 H7  SING N N 14 
8O9 C07 H8  SING N N 15 
8O9 C07 H9  SING N N 16 
8O9 N06 H10 SING N N 17 
8O9 O01 H12 SING N N 18 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8O9 InChI            InChI                1.06  InChI=1S/C5H11NO/c7-5-2-1-3-6-4-5/h5-7H,1-4H2/t5-/m0/s1 
8O9 InChIKey         InChI                1.06  BIWOSRSKDCZIFM-YFKPBYRVSA-N                             
8O9 SMILES_CANONICAL CACTVS               3.385 "O[C@H]1CCCNC1"                                         
8O9 SMILES           CACTVS               3.385 "O[CH]1CCCNC1"                                          
8O9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C1C[C@@H](CNC1)O"                                      
8O9 SMILES           "OpenEye OEToolkits" 2.0.7 "C1CC(CNC1)O"                                           
# 
_pdbx_chem_comp_identifier.comp_id           8O9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{S})-piperidin-3-ol" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      8O9 
_pdbx_chem_comp_synonyms.name         "(S)-3-Hydroxypiperidine" 
_pdbx_chem_comp_synonyms.provenance   PUBCHEM 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8O9 "Create component"  2021-10-28 PDBE 
8O9 "Modify descriptor" 2022-08-22 RCSB 
8O9 "Initial release"   2022-11-09 RCSB 
# 
