data_8G9
# 
_chem_comp.id                                    8G9 
_chem_comp.name                                  "(1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H45 N5 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-09-16 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        507.666 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     8G9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7S6W 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
8G9 C11 C1  C 0 1 N N S N N N -13.598 -8.863  2.864  2.419  -0.148 -0.534 C11 8G9 1  
8G9 C12 C2  C 0 1 N N N N N N -13.525 -8.750  1.356  1.073  -0.027 0.133  C12 8G9 2  
8G9 C13 C3  C 0 1 N N N N N N -15.242 -6.922  1.440  0.507  2.117  -1.116 C13 8G9 3  
8G9 C14 C4  C 0 1 N N S N N N -14.230 -7.593  -0.660 -1.018 1.370  0.484  C14 8G9 4  
8G9 C15 C5  C 0 1 N N N N N N -12.912 -6.925  -0.977 -2.152 0.966  -0.421 C15 8G9 5  
8G9 C16 C6  C 0 1 N N S N N N -15.834 -6.104  0.298  0.020  3.397  -0.403 C16 8G9 6  
8G9 C17 C7  C 0 1 N N S N N N -10.863 -6.876  -2.283 -4.501 0.440  -0.803 C17 8G9 7  
8G9 C18 C8  C 0 1 N N N N N N -16.826 -6.869  -0.563 0.369  3.576  1.076  C18 8G9 8  
8G9 C19 C9  C 0 1 N N N N N N -9.838  -8.016  -2.349 -5.583 -0.264 0.019  C19 8G9 9  
8G9 C20 C10 C 0 1 N N S N N N -9.757  -8.725  -0.995 -5.027 -1.576 0.575  C20 8G9 10 
8G9 C21 C11 C 0 1 N N N N N N -9.062  -7.831  0.041  -4.692 -2.553 -0.575 C21 8G9 11 
8G9 C22 C12 C 0 1 N N N N N N -7.926  -8.670  0.624  -5.085 -3.914 0.042  C22 8G9 12 
8G9 C23 C13 C 0 1 N N N N N N -17.854 -6.024  -1.341 0.292  4.992  1.652  C23 8G9 13 
8G9 C24 C14 C 0 1 N N N N N N -8.926  -9.980  -1.011 -6.085 -2.299 1.380  C24 8G9 14 
8G9 C25 C15 C 0 1 N N N N N N -17.213 -8.331  -0.291 1.475  2.689  1.652  C25 8G9 15 
8G9 C26 C16 C 0 1 N N N N N N -12.488 -8.572  5.087  1.781  -2.318 -1.597 C26 8G9 16 
8G9 C27 C17 C 0 1 N N N N N N -18.188 -11.545 3.490  7.290  0.261  1.191  C27 8G9 17 
8G9 C28 C18 C 0 1 N N N N N N -17.157 -11.507 5.765  7.401  -1.577 -0.497 C28 8G9 18 
8G9 C29 C19 C 0 1 N N N N N N -17.052 -13.556 4.389  7.666  -2.095 1.933  C29 8G9 19 
8G9 C30 C20 C 0 1 N N N N N N -12.258 -8.607  3.584  2.264  -0.890 -1.863 C30 8G9 20 
8G9 C31 C21 C 0 1 N N N N N N -11.648 -7.262  3.205  1.243  -0.161 -2.738 C31 8G9 21 
8G9 C32 C22 C 0 1 N N N N N N -11.211 -9.673  3.258  3.614  -0.934 -2.583 C32 8G9 22 
8G9 C34 C23 C 0 1 N N R N N N -15.375 -6.646  -1.055 -0.988 2.905  0.656  C34 8G9 23 
8G9 C7  C24 C 0 1 N N N N N N -17.019 -12.038 4.340  6.949  -1.205 0.916  C7  8G9 24 
8G9 C8  C25 C 0 1 N N N N N N -11.023 -6.106  -3.596 -5.093 1.686  -1.465 C8  8G9 25 
8G9 C9  C26 C 0 1 N N N N N N -15.346 -10.376 3.593  4.662  -0.714 0.230  C9  8G9 26 
8G9 N10 N1  N 0 1 N N N N N N -14.097 -10.181 3.201  3.331  -0.893 0.338  N10 8G9 27 
8G9 N13 N2  N 0 1 N N N N N N -14.296 -7.815  0.785  0.282  1.031  -0.134 N13 8G9 28 
8G9 N16 N3  N 0 1 N N N N N N -12.161 -7.453  -1.944 -3.398 0.833  0.077  N16 8G9 29 
8G9 N23 N4  N 0 1 N N N N N N -7.890  -9.890  -0.171 -6.099 -3.604 1.057  N23 8G9 30 
8G9 N8  N5  N 0 1 N N N N N N -15.754 -11.637 3.729  5.501  -1.399 1.032  N8  8G9 31 
8G9 O26 O1  O 0 1 N N N N N N -9.196  -10.952 -1.695 -6.813 -1.778 2.197  O26 8G9 32 
8G9 O29 O2  O 0 1 N N N N N N -16.060 -9.408  3.825  5.107  0.066  -0.590 O29 8G9 33 
8G9 O33 O3  O 0 1 N N N N N N -12.800 -9.495  0.685  0.703  -0.881 0.911  O33 8G9 34 
8G9 O38 O4  O 0 1 N N N N N N -12.543 -5.934  -0.362 -1.945 0.761  -1.598 O38 8G9 35 
8G9 O9  O5  O 0 1 N N N N N N -9.812  -5.449  -3.976 -5.684 2.521  -0.468 O9  8G9 36 
8G9 H1  H1  H 0 1 N N N N N N -14.316 -8.112  3.224  2.825  0.846  -0.719 H1  8G9 37 
8G9 H2  H2  H 0 1 N N N N N N -14.728 -6.270  2.162  -0.076 1.940  -2.020 H2  8G9 38 
8G9 H3  H3  H 0 1 N N N N N N -16.026 -7.495  1.957  1.567  2.197  -1.358 H3  8G9 39 
8G9 H4  H4  H 0 1 N N N N N N -14.320 -8.541  -1.210 -1.115 0.884  1.455  H4  8G9 40 
8G9 H5  H5  H 0 1 N N N N N N -15.958 -5.018  0.425  -0.176 4.275  -1.019 H5  8G9 41 
8G9 H6  H6  H 0 1 N N N N N N -10.555 -6.171  -1.496 -4.129 -0.238 -1.571 H6  8G9 42 
8G9 H7  H7  H 0 1 N N N N N N -10.145 -8.738  -3.120 -5.889 0.380  0.843  H7  8G9 43 
8G9 H8  H8  H 0 1 N N N N N N -8.851  -7.604  -2.604 -6.443 -0.474 -0.617 H8  8G9 44 
8G9 H9  H9  H 0 1 N N N N N N -10.774 -8.960  -0.647 -4.144 -1.387 1.185  H9  8G9 45 
8G9 H10 H10 H 0 1 N N N N N N -8.661  -6.927  -0.441 -5.293 -2.337 -1.458 H10 8G9 46 
8G9 H11 H11 H 0 1 N N N N N N -9.769  -7.542  0.832  -3.629 -2.526 -0.813 H11 8G9 47 
8G9 H12 H12 H 0 1 N N N N N N -8.126  -8.906  1.680  -5.505 -4.567 -0.723 H12 8G9 48 
8G9 H13 H13 H 0 1 N N N N N N -18.863 -6.222  -0.950 1.297  5.345  1.883  H13 8G9 49 
8G9 H14 H14 H 0 1 N N N N N N -17.617 -4.957  -1.220 -0.167 5.657  0.921  H14 8G9 50 
8G9 H15 H15 H 0 1 N N N N N N -17.815 -6.290  -2.408 -0.308 4.982  2.562  H15 8G9 51 
8G9 H16 H16 H 0 1 N N N N N N -16.405 -8.827  0.267  2.345  3.302  1.890  H16 8G9 52 
8G9 H17 H17 H 0 1 N N N N N N -18.139 -8.361  0.301  1.115  2.202  2.558  H17 8G9 53 
8G9 H18 H18 H 0 1 N N N N N N -17.372 -8.852  -1.247 1.753  1.933  0.918  H18 8G9 54 
8G9 H19 H19 H 0 1 N N N N N N -11.533 -8.389  5.601  0.820  -2.286 -1.084 H19 8G9 55 
8G9 H20 H20 H 0 1 N N N N N N -13.195 -7.765  5.331  1.671  -2.846 -2.544 H20 8G9 56 
8G9 H21 H21 H 0 1 N N N N N N -12.903 -9.536  5.417  2.509  -2.837 -0.974 H21 8G9 57 
8G9 H22 H22 H 0 1 N N N N N N -19.136 -11.851 3.957  8.366  0.406  1.104  H22 8G9 58 
8G9 H23 H23 H 0 1 N N N N N N -18.152 -10.448 3.418  6.778  0.895  0.467  H23 8G9 59 
8G9 H24 H24 H 0 1 N N N N N N -18.118 -11.981 2.482  6.967  0.527  2.198  H24 8G9 60 
8G9 H25 H25 H 0 1 N N N N N N -16.313 -11.864 6.373  8.478  -1.432 -0.584 H25 8G9 61 
8G9 H26 H26 H 0 1 N N N N N N -17.157 -10.407 5.748  7.158  -2.622 -0.693 H26 8G9 62 
8G9 H27 H27 H 0 1 N N N N N N -18.101 -11.867 6.200  6.890  -0.943 -1.222 H27 8G9 63 
8G9 H28 H28 H 0 1 N N N N N N -16.213 -13.922 4.999  7.344  -1.829 2.940  H28 8G9 64 
8G9 H29 H29 H 0 1 N N N N N N -18.002 -13.888 4.834  7.423  -3.139 1.737  H29 8G9 65 
8G9 H30 H30 H 0 1 N N N N N N -16.965 -13.958 3.369  8.743  -1.950 1.846  H30 8G9 66 
8G9 H31 H31 H 0 1 N N N N N N -10.698 -7.126  3.742  1.611  0.838  -2.972 H31 8G9 67 
8G9 H32 H32 H 0 1 N N N N N N -11.464 -7.236  2.121  1.093  -0.719 -3.663 H32 8G9 68 
8G9 H33 H33 H 0 1 N N N N N N -12.343 -6.454  3.479  0.296  -0.083 -2.204 H33 8G9 69 
8G9 H34 H34 H 0 1 N N N N N N -10.277 -9.446  3.794  4.341  -1.454 -1.960 H34 8G9 70 
8G9 H35 H35 H 0 1 N N N N N N -11.583 -10.660 3.571  3.503  -1.463 -3.530 H35 8G9 71 
8G9 H36 H36 H 0 1 N N N N N N -11.020 -9.680  2.175  3.957  0.083  -2.773 H36 8G9 72 
8G9 H37 H37 H 0 1 N N N N N N -15.208 -5.936  -1.878 -1.932 3.409  0.861  H37 8G9 73 
8G9 H38 H38 H 0 1 N N N N N N -11.814 -5.352  -3.472 -4.303 2.235  -1.977 H38 8G9 74 
8G9 H39 H39 H 0 1 N Y N N N N -11.310 -6.811  -4.390 -5.854 1.387  -2.186 H39 8G9 75 
8G9 H40 H40 H 0 1 N N N N N N -13.480 -10.965 3.136  2.976  -1.515 0.992  H40 8G9 76 
8G9 H41 H41 H 0 1 N N N N N N -12.491 -8.254  -2.443 -3.563 0.998  1.019  H41 8G9 77 
8G9 H42 H42 H 0 1 N N N N N N -15.152 -12.360 3.389  5.147  -2.022 1.687  H42 8G9 78 
8G9 H43 H43 H 0 1 N N N N N N -9.947  -4.982  -4.792 -6.081 3.331  -0.817 H43 8G9 79 
8G9 H44 H44 H 0 1 N N N N N N -6.970  -8.131  0.543  -4.217 -4.383 0.504  H44 8G9 80 
8G9 H45 H45 H 0 1 N N N N N N -7.172  -10.582 -0.097 -6.701 -4.258 1.446  H45 8G9 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
8G9 O9  C8  SING N N 1  
8G9 C8  C17 SING N N 2  
8G9 C19 C17 SING N N 3  
8G9 C19 C20 SING N N 4  
8G9 C17 N16 SING N N 5  
8G9 N16 C15 SING N N 6  
8G9 O26 C24 DOUB N N 7  
8G9 C23 C18 SING N N 8  
8G9 C34 C14 SING N N 9  
8G9 C34 C18 SING N N 10 
8G9 C34 C16 SING N N 11 
8G9 C24 C20 SING N N 12 
8G9 C24 N23 SING N N 13 
8G9 C20 C21 SING N N 14 
8G9 C15 C14 SING N N 15 
8G9 C15 O38 DOUB N N 16 
8G9 C14 N13 SING N N 17 
8G9 C18 C25 SING N N 18 
8G9 C18 C16 SING N N 19 
8G9 N23 C22 SING N N 20 
8G9 C21 C22 SING N N 21 
8G9 C16 C13 SING N N 22 
8G9 O33 C12 DOUB N N 23 
8G9 N13 C12 SING N N 24 
8G9 N13 C13 SING N N 25 
8G9 C12 C11 SING N N 26 
8G9 C11 N10 SING N N 27 
8G9 C11 C30 SING N N 28 
8G9 N10 C9  SING N N 29 
8G9 C31 C30 SING N N 30 
8G9 C32 C30 SING N N 31 
8G9 C27 C7  SING N N 32 
8G9 C30 C26 SING N N 33 
8G9 C9  N8  SING N N 34 
8G9 C9  O29 DOUB N N 35 
8G9 N8  C7  SING N N 36 
8G9 C7  C29 SING N N 37 
8G9 C7  C28 SING N N 38 
8G9 C11 H1  SING N N 39 
8G9 C13 H2  SING N N 40 
8G9 C13 H3  SING N N 41 
8G9 C14 H4  SING N N 42 
8G9 C16 H5  SING N N 43 
8G9 C17 H6  SING N N 44 
8G9 C19 H7  SING N N 45 
8G9 C19 H8  SING N N 46 
8G9 C20 H9  SING N N 47 
8G9 C21 H10 SING N N 48 
8G9 C21 H11 SING N N 49 
8G9 C22 H12 SING N N 50 
8G9 C23 H13 SING N N 51 
8G9 C23 H14 SING N N 52 
8G9 C23 H15 SING N N 53 
8G9 C25 H16 SING N N 54 
8G9 C25 H17 SING N N 55 
8G9 C25 H18 SING N N 56 
8G9 C26 H19 SING N N 57 
8G9 C26 H20 SING N N 58 
8G9 C26 H21 SING N N 59 
8G9 C27 H22 SING N N 60 
8G9 C27 H23 SING N N 61 
8G9 C27 H24 SING N N 62 
8G9 C28 H25 SING N N 63 
8G9 C28 H26 SING N N 64 
8G9 C28 H27 SING N N 65 
8G9 C29 H28 SING N N 66 
8G9 C29 H29 SING N N 67 
8G9 C29 H30 SING N N 68 
8G9 C31 H31 SING N N 69 
8G9 C31 H32 SING N N 70 
8G9 C31 H33 SING N N 71 
8G9 C32 H34 SING N N 72 
8G9 C32 H35 SING N N 73 
8G9 C32 H36 SING N N 74 
8G9 C34 H37 SING N N 75 
8G9 C8  H38 SING N N 76 
8G9 C8  H39 SING N N 77 
8G9 N10 H40 SING N N 78 
8G9 N16 H41 SING N N 79 
8G9 N8  H42 SING N N 80 
8G9 O9  H43 SING N N 81 
8G9 C22 H44 SING N N 82 
8G9 N23 H45 SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
8G9 SMILES           ACDLabs              12.01 "CC1(C)C2C(C(=O)NC(CC3CCNC3=O)CO)N(CC21)C(=O)C(NC(=O)NC(C)(C)C)C(C)(C)C"                                                                                                                                                  
8G9 InChI            InChI                1.03  "InChI=1S/C26H45N5O5/c1-24(2,3)19(29-23(36)30-25(4,5)6)22(35)31-12-16-17(26(16,7)8)18(31)21(34)28-15(13-32)11-14-9-10-27-20(14)33/h14-19,32H,9-13H2,1-8H3,(H,27,33)(H,28,34)(H2,29,30,36)/t14-,15-,16-,17-,18-,19+/m0/s1" 
8G9 InChIKey         InChI                1.03  BKEPDWNBCUBDEN-KOUJMVCDSA-N                                                                                                                                                                                               
8G9 SMILES_CANONICAL CACTVS               3.385 "CC(C)(C)NC(=O)N[C@H](C(=O)N1C[C@H]2[C@@H]([C@H]1C(=O)N[C@H](CO)C[C@@H]3CCNC3=O)C2(C)C)C(C)(C)C"                                                                                                                          
8G9 SMILES           CACTVS               3.385 "CC(C)(C)NC(=O)N[CH](C(=O)N1C[CH]2[CH]([CH]1C(=O)N[CH](CO)C[CH]3CCNC3=O)C2(C)C)C(C)(C)C"                                                                                                                                  
8G9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H]2[C@H]1[C@H](N(C2)C(=O)[C@H](C(C)(C)C)NC(=O)NC(C)(C)C)C(=O)N[C@@H](C[C@@H]3CCNC3=O)CO)C"                                                                                                                       
8G9 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C2C1C(N(C2)C(=O)C(C(C)(C)C)NC(=O)NC(C)(C)C)C(=O)NC(CC3CCNC3=O)CO)C"                                                                                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
8G9 "SYSTEMATIC NAME" ACDLabs              12.01 "(1R,2S,5S)-3-[N-(tert-butylcarbamoyl)-3-methyl-L-valyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide"                                                   
8G9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(1~{R},2~{S},5~{S})-3-[(2~{S})-2-(~{tert}-butylcarbamoylamino)-3,3-dimethyl-butanoyl]-6,6-dimethyl-~{N}-[(2~{S})-1-oxidanyl-3-[(3~{S})-2-oxidanylidenepyrrolidin-3-yl]propan-2-yl]-3-azabicyclo[3.1.0]hexane-2-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
8G9 "Create component" 2021-09-16 RCSB 
8G9 "Initial release"  2022-07-27 RCSB 
8G9 "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            8G9 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C8 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
