data_7H9
# 
_chem_comp.id                                    7H9 
_chem_comp.name                                  "1-[6-[(4-fluorophenyl)methyl]-3,3-dimethyl-2~{H}-pyrrolo[3,2-b]pyridin-1-yl]-2-[(2~{R},5~{R})-5-methyl-2-[[(3~{R})-3-methylmorpholin-4-yl]methyl]piperazin-4-ium-1-yl]ethanone" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H41 F N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2016-10-25 
_chem_comp.pdbx_modified_date                    2017-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        510.667 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7H9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5M6L 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7H9 C1  C1  C 0 1 N N N -15.595 -21.927 -0.436  3.227  -4.301 -2.873 C1  7H9 1  
7H9 C2  C2  C 0 1 N N R -16.049 -20.556 -0.841  3.117  -3.729 -1.458 C2  7H9 2  
7H9 C3  C3  C 0 1 N N N -15.909 -20.335 -2.331  2.173  -2.525 -1.467 C3  7H9 3  
7H9 N4  N1  N 0 1 N N N -16.252 -18.958 -2.717  2.084  -1.966 -0.110 N4  7H9 4  
7H9 C5  C4  C 0 1 N N N -16.411 -18.864 -4.166  1.141  -0.840 -0.065 C5  7H9 5  
7H9 C6  C5  C 0 1 N N N -15.149 -19.108 -4.989  1.554  0.201  -1.073 C6  7H9 6  
7H9 C10 C6  C 0 1 N N N -16.212 -18.359 -8.435  -0.285 3.121  -2.402 C10 7H9 7  
7H9 C11 C7  C 0 1 N N N -16.934 -19.525 -9.112  0.108  4.556  -2.047 C11 7H9 8  
7H9 C12 C8  C 0 1 N N N -16.688 -17.053 -9.052  -0.996 3.084  -3.757 C12 7H9 9  
7H9 C13 C9  C 0 1 Y N N -14.744 -18.504 -8.506  -1.170 2.534  -1.324 C13 7H9 10 
7H9 C15 C10 C 0 1 Y N N -12.634 -18.502 -9.403  -2.980 2.264  0.081  C15 7H9 11 
7H9 C16 C11 C 0 1 Y N N -12.031 -18.880 -8.219  -2.407 1.152  0.670  C16 7H9 12 
7H9 C19 C12 C 0 1 Y N N -10.180 -21.476 -7.468  -5.351 -0.178 0.790  C19 7H9 13 
7H9 C21 C13 C 0 1 Y N N -9.354  -23.064 -8.997  -5.840 -2.409 0.068  C21 7H9 14 
7H9 C23 C14 C 0 1 Y N N -9.277  -22.130 -9.988  -4.569 -2.808 0.442  C23 7H9 15 
7H9 C24 C15 C 0 1 Y N N -9.671  -20.835 -9.699  -3.693 -1.894 0.995  C24 7H9 16 
7H9 C25 C16 C 0 1 Y N N -12.861 -19.085 -7.125  -1.166 0.721  0.237  C25 7H9 17 
7H9 C26 C17 C 0 1 Y N N -14.232 -18.886 -7.256  -0.529 1.430  -0.786 C26 7H9 18 
7H9 C27 C18 C 0 1 N N R -15.398 -17.973 -2.025  3.411  -1.561 0.376  C27 7H9 19 
7H9 C28 C19 C 0 1 N N N -15.596 -16.493 -2.385  3.289  -1.019 1.801  C28 7H9 20 
7H9 C31 C20 C 0 1 N N N -12.912 -15.870 -4.933  2.901  2.687  1.245  C31 7H9 21 
7H9 C35 C21 C 0 1 N N N -16.963 -14.784 -4.363  1.079  -0.410 3.498  C35 7H9 22 
7H9 C36 C22 C 0 1 N N N -15.625 -18.150 -0.542  4.345  -2.774 0.369  C36 7H9 23 
7H9 O7  O1  O 0 1 N N N -14.092 -19.409 -4.462  2.645  0.138  -1.599 O7  7H9 24 
7H9 N8  N2  N 0 1 N N N -15.271 -18.975 -6.333  0.710  1.203  -1.391 N8  7H9 25 
7H9 C9  C23 C 0 1 N N N -16.490 -18.385 -6.912  0.956  2.214  -2.423 C9  7H9 26 
7H9 N14 N3  N 0 1 Y N N -13.948 -18.321 -9.559  -2.355 2.912  -0.882 N14 7H9 27 
7H9 C17 C24 C 0 1 N N N -10.539 -19.080 -8.123  -3.127 0.417  1.771  C17 7H9 28 
7H9 C18 C25 C 0 1 Y N N -10.126 -20.493 -8.436  -4.083 -0.579 1.169  C18 7H9 29 
7H9 C20 C26 C 0 1 Y N N -9.800  -22.777 -7.746  -6.231 -1.092 0.242  C20 7H9 30 
7H9 F22 F1  F 0 1 N N N -8.974  -24.339 -9.273  -6.700 -3.303 -0.468 F22 7H9 31 
7H9 N29 N4  N 0 1 N N N -14.958 -16.096 -3.651  2.658  0.308  1.768  N29 7H9 32 
7H9 C30 C27 C 0 1 N N N -13.489 -16.031 -3.555  3.613  1.334  1.323  C30 7H9 33 
7H9 O32 O2  O 0 1 N N N -13.346 -14.653 -5.530  2.331  2.994  2.521  O32 7H9 34 
7H9 C33 C28 C 0 1 N N N -14.780 -14.623 -5.568  1.396  2.016  2.985  C33 7H9 35 
7H9 C34 C29 C 0 1 N N R -15.454 -14.831 -4.225  2.094  0.656  3.080  C34 7H9 36 
7H9 N37 N5  N 1 1 N N N -15.243 -19.524 -0.110  4.445  -3.307 -0.996 N37 7H9 37 
7H9 H39 H1  H 0 1 N N N -15.713 -22.047 0.651   3.899  -5.159 -2.867 H39 7H9 38 
7H9 H40 H2  H 0 1 N N N -16.202 -22.683 -0.956  2.241  -4.614 -3.216 H40 7H9 39 
7H9 H38 H3  H 0 1 N N N -14.537 -22.058 -0.707  3.619  -3.537 -3.544 H38 7H9 40 
7H9 H41 H4  H 0 1 N N N -17.108 -20.438 -0.567  2.725  -4.493 -0.787 H41 7H9 41 
7H9 H43 H5  H 0 1 N N N -16.580 -21.029 -2.858  2.557  -1.766 -2.148 H43 7H9 42 
7H9 H42 H6  H 0 1 N N N -14.868 -20.537 -2.624  1.183  -2.841 -1.796 H42 7H9 43 
7H9 H44 H8  H 0 1 N N N -16.777 -17.854 -4.401  0.138  -1.197 -0.301 H44 7H9 44 
7H9 H45 H9  H 0 1 N N N -17.163 -19.607 -4.472  1.146  -0.402 0.933  H45 7H9 45 
7H9 H48 H10 H 0 1 N N N -16.594 -20.473 -8.670  0.812  4.934  -2.789 H48 7H9 46 
7H9 H49 H11 H 0 1 N N N -18.019 -19.420 -8.964  -0.782 5.185  -2.037 H49 7H9 47 
7H9 H50 H12 H 0 1 N N N -16.708 -19.520 -10.189 0.575  4.571  -1.062 H50 7H9 48 
7H9 H53 H13 H 0 1 N N N -16.172 -16.210 -8.569  -1.306 2.062  -3.977 H53 7H9 49 
7H9 H51 H14 H 0 1 N N N -16.463 -17.053 -10.129 -1.872 3.731  -3.726 H51 7H9 50 
7H9 H52 H15 H 0 1 N N N -17.773 -16.952 -8.904  -0.315 3.432  -4.534 H52 7H9 51 
7H9 H54 H16 H 0 1 N N N -11.999 -18.342 -10.262 -3.948 2.605  0.414  H54 7H9 52 
7H9 H57 H17 H 0 1 N N N -10.525 -21.225 -6.476  -5.655 0.850  0.926  H57 7H9 53 
7H9 H59 H18 H 0 1 N N N -8.918  -22.394 -10.972 -4.263 -3.835 0.307  H59 7H9 54 
7H9 H60 H19 H 0 1 N N N -9.623  -20.080 -10.470 -2.701 -2.205 1.288  H60 7H9 55 
7H9 H61 H20 H 0 1 N N N -12.445 -19.397 -6.178  -0.697 -0.145 0.682  H61 7H9 56 
7H9 H62 H21 H 0 1 N N N -14.348 -18.224 -2.234  3.816  -0.787 -0.275 H62 7H9 57 
7H9 H64 H22 H 0 1 N N N -15.171 -15.880 -1.576  2.678  -1.696 2.397  H64 7H9 58 
7H9 H63 H23 H 0 1 N N N -16.676 -16.298 -2.465  4.281  -0.938 2.245  H63 7H9 59 
7H9 H67 H24 H 0 1 N N N -13.237 -16.714 -5.560  3.618  3.460  0.971  H67 7H9 60 
7H9 H68 H25 H 0 1 N N N -11.814 -15.865 -4.865  2.111  2.640  0.495  H68 7H9 61 
7H9 H73 H26 H 0 1 N N N -17.427 -14.937 -3.377  0.281  -0.463 2.758  H73 7H9 62 
7H9 H74 H27 H 0 1 N N N -17.264 -13.804 -4.762  1.576  -1.378 3.566  H74 7H9 63 
7H9 H72 H28 H 0 1 N N N -17.293 -15.577 -5.051  0.658  -0.150 4.469  H72 7H9 64 
7H9 H75 H29 H 0 1 N N N -15.016 -17.417 0.006   5.333  -2.473 0.715  H75 7H9 65 
7H9 H76 H30 H 0 1 N N N -16.689 -17.984 -0.317  3.946  -3.543 1.031  H76 7H9 66 
7H9 H47 H31 H 0 1 N N N -16.652 -17.367 -6.527  1.062  1.741  -3.399 H47 7H9 67 
7H9 H46 H32 H 0 1 N N N -17.369 -19.006 -6.686  1.849  2.790  -2.182 H46 7H9 68 
7H9 H55 H33 H 0 1 N N N -10.215 -18.836 -7.100  -2.401 -0.106 2.394  H55 7H9 69 
7H9 H56 H34 H 0 1 N N N -10.046 -18.402 -8.835  -3.681 1.130  2.381  H56 7H9 70 
7H9 H58 H35 H 0 1 N N N -9.856  -23.545 -6.988  -7.222 -0.779 -0.050 H58 7H9 71 
7H9 H66 H37 H 0 1 N N N -13.108 -16.958 -3.102  3.999  1.069  0.338  H66 7H9 72 
7H9 H65 H38 H 0 1 N N N -13.198 -15.173 -2.932  4.437  1.396  2.033  H65 7H9 73 
7H9 H70 H39 H 0 1 N N N -15.092 -13.644 -5.960  1.026  2.304  3.968  H70 7H9 74 
7H9 H69 H40 H 0 1 N N N -15.121 -15.416 -6.249  0.563  1.949  2.286  H69 7H9 75 
7H9 H71 H41 H 0 1 N N N -15.150 -14.007 -3.563  2.893  0.708  3.819  H71 7H9 76 
7H9 H78 H42 H 0 1 N N N -15.406 -19.616 0.872   5.071  -4.098 -1.002 H78 7H9 77 
7H9 H77 H77 H 0 1 N N N -14.272 -19.670 -0.302  4.803  -2.591 -1.611 H1  7H9 78 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7H9 C23 C24 DOUB Y N 1  
7H9 C23 C21 SING Y N 2  
7H9 C24 C18 SING Y N 3  
7H9 N14 C15 DOUB Y N 4  
7H9 N14 C13 SING Y N 5  
7H9 C15 C16 SING Y N 6  
7H9 F22 C21 SING N N 7  
7H9 C11 C10 SING N N 8  
7H9 C12 C10 SING N N 9  
7H9 C21 C20 DOUB Y N 10 
7H9 C13 C10 SING N N 11 
7H9 C13 C26 DOUB Y N 12 
7H9 C18 C17 SING N N 13 
7H9 C18 C19 DOUB Y N 14 
7H9 C10 C9  SING N N 15 
7H9 C16 C17 SING N N 16 
7H9 C16 C25 DOUB Y N 17 
7H9 C20 C19 SING Y N 18 
7H9 C26 C25 SING Y N 19 
7H9 C26 N8  SING N N 20 
7H9 C9  N8  SING N N 21 
7H9 N8  C6  SING N N 22 
7H9 C33 O32 SING N N 23 
7H9 C33 C34 SING N N 24 
7H9 O32 C31 SING N N 25 
7H9 C6  O7  DOUB N N 26 
7H9 C6  C5  SING N N 27 
7H9 C31 C30 SING N N 28 
7H9 C35 C34 SING N N 29 
7H9 C34 N29 SING N N 30 
7H9 C5  N4  SING N N 31 
7H9 N29 C30 SING N N 32 
7H9 N29 C28 SING N N 33 
7H9 N4  C3  SING N N 34 
7H9 N4  C27 SING N N 35 
7H9 C28 C27 SING N N 36 
7H9 C3  C2  SING N N 37 
7H9 C27 C36 SING N N 38 
7H9 C2  C1  SING N N 39 
7H9 C2  N37 SING N N 40 
7H9 C36 N37 SING N N 41 
7H9 C1  H39 SING N N 42 
7H9 C1  H40 SING N N 43 
7H9 C1  H38 SING N N 44 
7H9 C2  H41 SING N N 45 
7H9 C3  H43 SING N N 46 
7H9 C3  H42 SING N N 47 
7H9 C5  H44 SING N N 48 
7H9 C5  H45 SING N N 49 
7H9 C11 H48 SING N N 50 
7H9 C11 H49 SING N N 51 
7H9 C11 H50 SING N N 52 
7H9 C12 H53 SING N N 53 
7H9 C12 H51 SING N N 54 
7H9 C12 H52 SING N N 55 
7H9 C15 H54 SING N N 56 
7H9 C19 H57 SING N N 57 
7H9 C23 H59 SING N N 58 
7H9 C24 H60 SING N N 59 
7H9 C25 H61 SING N N 60 
7H9 C27 H62 SING N N 61 
7H9 C28 H64 SING N N 62 
7H9 C28 H63 SING N N 63 
7H9 C31 H67 SING N N 64 
7H9 C31 H68 SING N N 65 
7H9 C35 H73 SING N N 66 
7H9 C35 H74 SING N N 67 
7H9 C35 H72 SING N N 68 
7H9 C36 H75 SING N N 69 
7H9 C36 H76 SING N N 70 
7H9 C9  H47 SING N N 71 
7H9 C9  H46 SING N N 72 
7H9 C17 H55 SING N N 73 
7H9 C17 H56 SING N N 74 
7H9 C20 H58 SING N N 75 
7H9 C30 H66 SING N N 76 
7H9 C30 H65 SING N N 77 
7H9 C33 H70 SING N N 78 
7H9 C33 H69 SING N N 79 
7H9 C34 H71 SING N N 80 
7H9 N37 H78 SING N N 81 
7H9 N37 H77 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7H9 InChI            InChI                1.03  
"InChI=1S/C29H40FN5O2/c1-20-15-34(25(14-31-20)16-33-9-10-37-18-21(33)2)17-27(36)35-19-29(3,4)28-26(35)12-23(13-32-28)11-22-5-7-24(30)8-6-22/h5-8,12-13,20-21,25,31H,9-11,14-19H2,1-4H3/p+1/t20-,21-,25-/m1/s1" 
7H9 InChIKey         InChI                1.03  XIQKDUKFFKQZAO-DNRQZRRGSA-O 
7H9 SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1CN(CC(=O)N2CC(C)(C)c3ncc(Cc4ccc(F)cc4)cc23)[C@H](C[NH2+]1)CN5CCOC[C@H]5C" 
7H9 SMILES           CACTVS               3.385 "C[CH]1CN(CC(=O)N2CC(C)(C)c3ncc(Cc4ccc(F)cc4)cc23)[CH](C[NH2+]1)CN5CCOC[CH]5C" 
7H9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C[C@@H]1CN([C@H](C[NH2+]1)CN2CCOC[C@H]2C)CC(=O)N3CC(c4c3cc(cn4)Cc5ccc(cc5)F)(C)C" 
7H9 SMILES           "OpenEye OEToolkits" 2.0.6 "CC1CN(C(C[NH2+]1)CN2CCOCC2C)CC(=O)N3CC(c4c3cc(cn4)Cc5ccc(cc5)F)(C)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7H9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[6-[(4-fluorophenyl)methyl]-3,3-dimethyl-2~{H}-pyrrolo[3,2-b]pyridin-1-yl]-2-[(2~{R},5~{R})-5-methyl-2-[[(3~{R})-3-methylmorpholin-4-yl]methyl]piperazin-4-ium-1-yl]ethanone" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7H9 "Create component"   2016-10-25 EBI  
7H9 "Other modification" 2016-10-26 EBI  
7H9 "Initial release"    2017-05-24 RCSB 
# 
