data_7B9
# 
_chem_comp.id                                    7B9 
_chem_comp.name                                  "[5-hydroxy-4-({[6-(3-hydroxypropyl)-4-oxo-1,4-dihydropyridin-3-yl]amino}methyl)-6-methylpyridin-3-yl]methyl dihydrogen phosphate" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H22 N3 O7 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-09-28 
_chem_comp.pdbx_modified_date                    2017-05-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        399.336 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     7B9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5TE2 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
7B9 O3P O1  O 0 1 N N N -4.404 -5.586  -22.722 -5.690 -3.079 -0.109 O3P 7B9 1  
7B9 P   P1  P 0 1 N N N -3.282 -6.021  -23.614 -4.126 -2.777 0.124  P   7B9 2  
7B9 O1P O2  O 0 1 N N N -2.906 -4.956  -24.624 -3.713 -3.306 1.444  O1P 7B9 3  
7B9 O2P O3  O 0 1 N N N -2.083 -6.601  -22.888 -3.264 -3.491 -1.033 O2P 7B9 4  
7B9 O4P O4  O 0 1 N N N -3.761 -7.291  -24.486 -3.873 -1.188 0.079  O4P 7B9 5  
7B9 C5A C1  C 0 1 N N N -4.790 -7.180  -25.455 -2.603 -0.594 0.356  C5A 7B9 6  
7B9 C5  C2  C 0 1 Y N N -5.427 -8.528  -25.707 -2.711 0.904  0.228  C5  7B9 7  
7B9 C6  C3  C 0 1 Y N N -5.392 -9.140  -26.949 -3.916 1.492  -0.107 C6  7B9 8  
7B9 N1  N1  N 0 1 Y N N -5.979 -10.331 -27.195 -4.021 2.802  -0.222 N1  7B9 9  
7B9 C4  C4  C 0 1 Y N N -6.151 -9.182  -24.609 -1.604 1.707  0.449  C4  7B9 10 
7B9 C4A C5  C 0 1 N N N -6.183 -8.485  -23.273 -0.274 1.104  0.821  C4A 7B9 11 
7B9 C3  C6  C 0 1 Y N N -6.791 -10.486 -24.901 -1.751 3.085  0.320  C3  7B9 12 
7B9 O3  O5  O 0 1 N N N -7.470 -11.179 -23.966 -0.693 3.913  0.527  O3  7B9 13 
7B9 C2  C7  C 0 1 Y N N -6.656 -11.033 -26.269 -2.991 3.601  -0.024 C2  7B9 14 
7B9 C2A C8  C 0 1 N N N -7.294 -12.360 -26.603 -3.165 5.091  -0.169 C2A 7B9 15 
7B9 N2  N2  N 0 1 N N N -7.427 -8.665  -22.572 0.490  0.819  -0.396 N2  7B9 16 
7B9 C7  C9  C 0 1 N N N -7.714 -7.788  -21.585 1.769  0.250  -0.304 C7  7B9 17 
7B9 C8  C10 C 0 1 N N N -7.455 -6.427  -21.705 2.305  -0.045 0.906  C8  7B9 18 
7B9 N9  N3  N 0 1 N N N -7.763 -5.605  -20.689 3.543  -0.596 0.998  N9  7B9 19 
7B9 C10 C11 C 0 1 N N N -8.322 -6.043  -19.551 4.280  -0.868 -0.105 C10 7B9 20 
7B9 C11 C12 C 0 1 N N N -8.624 -7.391  -19.334 3.803  -0.599 -1.341 C11 7B9 21 
7B9 C12 C13 C 0 1 N N N -8.328 -8.298  -20.341 2.517  -0.030 -1.477 C12 7B9 22 
7B9 O13 O6  O 0 1 N N N -8.551 -9.525  -20.238 2.060  0.219  -2.584 O13 7B9 23 
7B9 C14 C14 C 0 1 N N N -8.632 -5.019  -18.496 5.649  -1.479 0.047  C14 7B9 24 
7B9 H1  H1  H 0 1 N N N -4.676 -4.707  -22.960 -5.916 -4.019 -0.095 H1  7B9 25 
7B9 H2  H2  H 0 1 N N N -1.290 -6.184  -23.203 -3.482 -3.192 -1.927 H2  7B9 26 
7B9 H3  H3  H 0 1 N N N -4.363 -6.800  -26.395 -2.295 -0.851 1.369  H3  7B9 27 
7B9 H4  H4  H 0 1 N N N -5.556 -6.480  -25.091 -1.865 -0.967 -0.354 H4  7B9 28 
7B9 H5  H5  H 0 1 N N N -4.873 -8.643  -27.755 -4.783 0.871  -0.277 H5  7B9 29 
7B9 H6  H6  H 0 1 N N N -5.369 -8.885  -22.650 0.282  1.805  1.443  H6  7B9 30 
7B9 H7  H7  H 0 1 N N N -6.025 -7.409  -23.436 -0.436 0.178  1.373  H7  7B9 31 
7B9 H8  H8  H 0 1 N N N -7.465 -10.696 -23.148 -0.174 4.095  -0.268 H8  7B9 32 
7B9 H9  H9  H 0 1 N N N -7.105 -12.603 -27.659 -3.451 5.518  0.793  H9  7B9 33 
7B9 H10 H10 H 0 1 N N N -6.864 -13.145 -25.963 -2.227 5.536  -0.499 H10 7B9 34 
7B9 H11 H11 H 0 1 N N N -8.379 -12.299 -26.430 -3.944 5.296  -0.903 H11 7B9 35 
7B9 H12 H12 H 0 1 N N N -8.163 -8.609  -23.247 0.111  1.023  -1.266 H12 7B9 36 
7B9 H13 H13 H 0 1 N N N -7.010 -6.035  -22.607 1.742  0.161  1.804  H13 7B9 37 
7B9 H14 H14 H 0 1 N N N -9.075 -7.717  -18.408 4.397  -0.819 -2.215 H14 7B9 38 
7B9 H16 H16 H 0 1 N N N -8.594 -4.071  -19.052 5.650  -2.164 0.895  H16 7B9 39 
7B9 H17 H17 H 0 1 N N N -9.675 -5.246  -18.229 5.907  -2.024 -0.861 H17 7B9 40 
7B9 H19 H19 H 0 1 N N N -7.568 -4.629  -20.784 3.908  -0.798 1.874  H19 7B9 41 
7B9 C1  C15 C 0 1 N N N ?      ?       ?       6.678  -0.372 0.286  C1  7B9 42 
7B9 C9  C16 C 0 1 N N N ?      ?       ?       8.068  -0.992 0.440  C9  7B9 43 
7B9 O1  O7  O 0 1 N N N ?      ?       ?       9.029  0.042  0.663  O1  7B9 44 
7B9 H15 H15 H 0 1 N N N ?      ?       ?       6.678  0.313  -0.562 H15 7B9 45 
7B9 H18 H18 H 0 1 N N N ?      ?       ?       6.421  0.174  1.194  H18 7B9 46 
7B9 H20 H20 H 0 1 N N N ?      ?       ?       8.068  -1.677 1.288  H20 7B9 47 
7B9 H21 H21 H 0 1 N N N ?      ?       ?       8.326  -1.538 -0.468 H21 7B9 48 
7B9 H22 H22 H 0 1 N N N ?      ?       ?       9.935  -0.279 0.770  H22 7B9 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
7B9 N1  C6  DOUB Y N 1  
7B9 N1  C2  SING Y N 2  
7B9 C6  C5  SING Y N 3  
7B9 C2A C2  SING N N 4  
7B9 C2  C3  DOUB Y N 5  
7B9 C5  C5A SING N N 6  
7B9 C5  C4  DOUB Y N 7  
7B9 C5A O4P SING N N 8  
7B9 C3  C4  SING Y N 9  
7B9 C3  O3  SING N N 10 
7B9 O1P P   DOUB N N 11 
7B9 C4  C4A SING N N 12 
7B9 O4P P   SING N N 13 
7B9 P   O2P SING N N 14 
7B9 P   O3P SING N N 15 
7B9 C4A N2  SING N N 16 
7B9 N2  C7  SING N N 17 
7B9 C8  C7  DOUB N N 18 
7B9 C8  N9  SING N N 19 
7B9 C7  C12 SING N N 20 
7B9 N9  C10 SING N N 21 
7B9 C12 O13 DOUB N N 22 
7B9 C12 C11 SING N N 23 
7B9 C10 C11 DOUB N N 24 
7B9 C10 C14 SING N N 25 
7B9 O3P H1  SING N N 26 
7B9 O2P H2  SING N N 27 
7B9 C5A H3  SING N N 28 
7B9 C5A H4  SING N N 29 
7B9 C6  H5  SING N N 30 
7B9 C4A H6  SING N N 31 
7B9 C4A H7  SING N N 32 
7B9 O3  H8  SING N N 33 
7B9 C2A H9  SING N N 34 
7B9 C2A H10 SING N N 35 
7B9 C2A H11 SING N N 36 
7B9 N2  H12 SING N N 37 
7B9 C8  H13 SING N N 38 
7B9 C11 H14 SING N N 39 
7B9 C14 H16 SING N N 40 
7B9 C14 H17 SING N N 41 
7B9 N9  H19 SING N N 42 
7B9 C14 C1  SING N N 43 
7B9 C1  C9  SING N N 44 
7B9 C9  O1  SING N N 45 
7B9 C1  H15 SING N N 46 
7B9 C1  H18 SING N N 47 
7B9 C9  H20 SING N N 48 
7B9 C9  H21 SING N N 49 
7B9 O1  H22 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
7B9 SMILES           ACDLabs              12.01 "OP(O)(=O)OCc2c(CNC=1C(C=C(NC=1)CCCO)=O)c(O)c(nc2)C"                                                                                                        
7B9 InChI            InChI                1.03  "InChI=1S/C16H22N3O7P/c1-10-16(22)13(11(6-17-10)9-26-27(23,24)25)7-19-14-8-18-12(3-2-4-20)5-15(14)21/h5-6,8,19-20,22H,2-4,7,9H2,1H3,(H,18,21)(H2,23,24,25)" 
7B9 InChIKey         InChI                1.03  LWVUNNHCQMOSIS-UHFFFAOYSA-N                                                                                                                                 
7B9 SMILES_CANONICAL CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CNC2=CNC(=CC2=O)CCCO)c1O"                                                                                                           
7B9 SMILES           CACTVS               3.385 "Cc1ncc(CO[P](O)(O)=O)c(CNC2=CNC(=CC2=O)CCCO)c1O"                                                                                                           
7B9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC2=CNC(=CC2=O)CCCO)O"                                                                                                           
7B9 SMILES           "OpenEye OEToolkits" 2.0.6 "Cc1c(c(c(cn1)COP(=O)(O)O)CNC2=CNC(=CC2=O)CCCO)O"                                                                                                           
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
7B9 "SYSTEMATIC NAME" ACDLabs              12.01 "[5-hydroxy-4-({[6-(3-hydroxypropyl)-4-oxo-1,4-dihydropyridin-3-yl]amino}methyl)-6-methylpyridin-3-yl]methyl dihydrogen phosphate"        
7B9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[6-methyl-5-oxidanyl-4-[[[4-oxidanylidene-6-(3-oxidanylpropyl)-1~{H}-pyridin-3-yl]amino]methyl]pyridin-3-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
7B9 "Create component" 2016-09-28 RCSB 
7B9 "Initial release"  2017-05-31 RCSB 
# 
