data_6H9
# 
_chem_comp.id                                    6H9 
_chem_comp.name                                  "2-(methylamino)-1H-benzimidazole-5-carbohydrazide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H11 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-04-11 
_chem_comp.pdbx_modified_date                    2017-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        205.217 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6H9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5J9N 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6H9 C1  C1  C 0 1 Y N N 17.698 18.313 17.547 -2.979 0.393  0.005  C1  6H9 1  
6H9 C2  C2  C 0 1 Y N N 16.627 17.555 19.242 -1.124 -0.814 0.002  C2  6H9 2  
6H9 C3  C3  C 0 1 Y N N 15.724 16.969 20.126 -0.112 -1.766 0.001  C3  6H9 3  
6H9 C4  C4  C 0 1 Y N N 15.999 17.001 21.483 1.197  -1.377 -0.004 C4  6H9 4  
6H9 C5  C5  C 0 1 Y N N 17.160 17.608 21.971 1.532  -0.017 -0.007 C5  6H9 5  
6H9 C6  C6  C 0 1 N N N 17.391 17.710 23.443 2.951  0.391  -0.011 C6  6H9 6  
6H9 O   O1  O 0 1 N N N 18.457 18.120 23.896 3.244  1.571  -0.014 O   6H9 7  
6H9 N2  N1  N 0 1 N N N 16.370 17.349 24.224 3.922  -0.544 -0.013 N2  6H9 8  
6H9 N3  N2  N 0 1 N N N 16.451 17.380 25.632 5.234  -0.166 -0.017 N3  6H9 9  
6H9 C7  C7  C 0 1 Y N N 18.077 18.172 21.087 0.531  0.951  -0.006 C7  6H9 10 
6H9 C8  C8  C 0 1 Y N N 17.795 18.139 19.731 -0.805 0.556  -0.001 C8  6H9 11 
6H9 N1  N3  N 0 1 Y N N 16.581 17.682 17.852 -2.504 -0.887 0.006  N1  6H9 12 
6H9 N4  N4  N 0 1 Y N N 18.466 18.611 18.618 -1.980 1.240  0.001  N4  6H9 13 
6H9 N   N5  N 0 1 N N N 18.066 18.640 16.309 -4.313 0.742  0.003  N   6H9 14 
6H9 C   C9  C 0 1 N N N 17.273 18.338 15.132 -5.343 -0.299 0.001  C   6H9 15 
6H9 H1  H1  H 0 1 N N N 14.824 16.497 19.759 -0.361 -2.817 0.004  H1  6H9 16 
6H9 H2  H2  H 0 1 N N N 15.305 16.549 22.176 1.978  -2.122 -0.005 H2  6H9 17 
6H9 H3  H3  H 0 1 N N N 15.518 17.046 23.796 3.688  -1.485 -0.011 H3  6H9 18 
6H9 H4  H4  H 0 1 N N N 15.583 17.073 26.023 5.439  0.441  0.763  H4  6H9 19 
6H9 H5  H5  H 0 1 N N N 17.187 16.775 25.937 5.843  -0.971 -0.017 H5  6H9 20 
6H9 H6  H6  H 0 1 N N N 18.988 18.625 21.451 0.789  1.999  -0.009 H6  6H9 21 
6H9 H7  H7  H 0 1 N N N 15.864 17.366 17.230 -3.036 -1.698 0.009  H7  6H9 22 
6H9 H9  H9  H 0 1 N N N 18.952 18.200 16.162 -4.570 1.678  0.002  H9  6H9 23 
6H9 H10 H10 H 0 1 N N N 17.791 18.709 14.235 -5.232 -0.919 -0.888 H10 6H9 24 
6H9 H11 H11 H 0 1 N N N 17.136 17.250 15.052 -5.235 -0.919 0.892  H11 6H9 25 
6H9 H12 H12 H 0 1 N N N 16.291 18.826 15.217 -6.329 0.165  -0.000 H12 6H9 26 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6H9 C  N   SING N N 1  
6H9 N  C1  SING N N 2  
6H9 C1 N1  SING Y N 3  
6H9 C1 N4  DOUB Y N 4  
6H9 N1 C2  SING Y N 5  
6H9 N4 C8  SING Y N 6  
6H9 C2 C8  DOUB Y N 7  
6H9 C2 C3  SING Y N 8  
6H9 C8 C7  SING Y N 9  
6H9 C3 C4  DOUB Y N 10 
6H9 C7 C5  DOUB Y N 11 
6H9 C4 C5  SING Y N 12 
6H9 C5 C6  SING N N 13 
6H9 C6 O   DOUB N N 14 
6H9 C6 N2  SING N N 15 
6H9 N2 N3  SING N N 16 
6H9 C3 H1  SING N N 17 
6H9 C4 H2  SING N N 18 
6H9 N2 H3  SING N N 19 
6H9 N3 H4  SING N N 20 
6H9 N3 H5  SING N N 21 
6H9 C7 H6  SING N N 22 
6H9 N1 H7  SING N N 23 
6H9 N  H9  SING N N 24 
6H9 C  H10 SING N N 25 
6H9 C  H11 SING N N 26 
6H9 C  H12 SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6H9 SMILES           ACDLabs              12.01 "c2(nc1c(cc(cc1)C(=O)NN)n2)NC"                                                                     
6H9 InChI            InChI                1.03  "InChI=1S/C9H11N5O/c1-11-9-12-6-3-2-5(8(15)14-10)4-7(6)13-9/h2-4H,10H2,1H3,(H,14,15)(H2,11,12,13)" 
6H9 InChIKey         InChI                1.03  UAYYHYYNSIPFPB-UHFFFAOYSA-N                                                                        
6H9 SMILES_CANONICAL CACTVS               3.385 "CNc1[nH]c2ccc(cc2n1)C(=O)NN"                                                                      
6H9 SMILES           CACTVS               3.385 "CNc1[nH]c2ccc(cc2n1)C(=O)NN"                                                                      
6H9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "CNc1[nH]c2ccc(cc2n1)C(=O)NN"                                                                      
6H9 SMILES           "OpenEye OEToolkits" 2.0.4 "CNc1[nH]c2ccc(cc2n1)C(=O)NN"                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6H9 "SYSTEMATIC NAME" ACDLabs              12.01 "2-(methylamino)-1H-benzimidazole-5-carbohydrazide"    
6H9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "2-(methylamino)-1~{H}-benzimidazole-5-carbohydrazide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6H9 "Create component" 2016-04-11 EBI  
6H9 "Initial release"  2017-05-24 RCSB 
# 
