data_5V9
# 
_chem_comp.id                                    5V9 
_chem_comp.name                                  "~{N}-[(4-thiophen-3-ylphenyl)methyl]cyclohexanamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H21 N S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-12-07 
_chem_comp.pdbx_modified_date                    2024-09-06 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        271.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5V9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5F50 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5V9 CAK C1  C 0 1 N N N N N N 22.383 -4.467  -0.421 -4.710 1.185  0.892  CAK 5V9 1  
5V9 CAI C2  C 0 1 N N N N N N 22.840 -3.175  -1.005 -6.217 1.200  0.626  CAI 5V9 2  
5V9 CAH C3  C 0 1 N N N N N N 22.852 -2.080  0.009  -6.772 -0.220 0.752  CAH 5V9 3  
5V9 CAJ C4  C 0 1 N N N N N N 21.522 -1.915  0.633  -6.083 -1.129 -0.269 CAJ 5V9 4  
5V9 CAL C5  C 0 1 N N N N N N 21.010 -3.186  1.237  -4.576 -1.144 -0.002 CAL 5V9 5  
5V9 CAS C6  C 0 1 N N N N N N 21.104 -4.372  0.340  -4.022 0.276  -0.128 CAS 5V9 6  
5V9 NAN N1  N 0 1 N N N N N N 20.986 -5.588  1.183  -2.575 0.261  0.128  NAN 5V9 7  
5V9 CAM C7  C 0 1 N N N N N N 20.583 -6.713  0.351  -1.828 -0.071 -1.093 CAM 5V9 8  
5V9 CAP C8  C 0 1 Y N N N N N 20.036 -7.891  1.025  -0.351 -0.077 -0.792 CAP 5V9 9  
5V9 CAD C9  C 0 1 Y N N N N N 18.734 -8.353  0.703  0.384  1.086  -0.929 CAD 5V9 10 
5V9 CAF C10 C 0 1 Y N N N N N 18.206 -9.478  1.356  1.737  1.087  -0.655 CAF 5V9 11 
5V9 CAC C11 C 0 1 Y N N N N N 20.784 -8.547  1.978  0.262  -1.245 -0.376 CAC 5V9 12 
5V9 CAE C12 C 0 1 Y N N N N N 20.245 -9.690  2.639  1.614  -1.256 -0.099 CAE 5V9 13 
5V9 CAQ C13 C 0 1 Y N N N N N 18.973 -10.146 2.327  2.361  -0.088 -0.240 CAQ 5V9 14 
5V9 CAR C14 C 0 1 Y N N N N N 18.420 -11.335 3.036  3.815  -0.094 0.055  CAR 5V9 15 
5V9 CAB C15 C 0 1 Y N N N N N 18.154 -12.663 2.393  4.497  -1.238 0.468  CAB 5V9 16 
5V9 CAA C16 C 0 1 Y N N N N N 17.635 -13.573 3.358  5.798  -1.066 0.689  CAA 5V9 17 
5V9 SAO S1  S 0 1 Y N N N N N 17.532 -12.859 4.764  6.243  0.606  0.376  SAO 5V9 18 
5V9 CAG C17 C 0 1 Y N N N N N 18.089 -11.387 4.394  4.586  1.003  -0.059 CAG 5V9 19 
5V9 H1  H1  H 0 1 N N N N N N 22.245 -5.187  -1.241 -4.315 2.196  0.803  H1  5V9 20 
5V9 H2  H2  H 0 1 N N N N N N 23.164 -4.834  0.261  -4.523 0.809  1.898  H2  5V9 21 
5V9 H3  H3  H 0 1 N N N N N N 23.858 -3.304  -1.401 -6.707 1.848  1.353  H3  5V9 22 
5V9 H4  H4  H 0 1 N N N N N N 22.161 -2.895  -1.823 -6.404 1.576  -0.380 H4  5V9 23 
5V9 H5  H5  H 0 1 N N N N N N 23.587 -2.322  0.790  -6.584 -0.596 1.758  H5  5V9 24 
5V9 H6  H6  H 0 1 N N N N N N 23.137 -1.138  -0.483 -7.845 -0.209 0.562  H6  5V9 25 
5V9 H7  H7  H 0 1 N N N N N N 21.595 -1.153  1.423  -6.478 -2.141 -0.179 H7  5V9 26 
5V9 H8  H8  H 0 1 N N N N N N 20.811 -1.578  -0.136 -6.270 -0.753 -1.274 H8  5V9 27 
5V9 H9  H9  H 0 1 N N N N N N 19.953 -3.039  1.504  -4.389 -1.520 1.004  H9  5V9 28 
5V9 H10 H10 H 0 1 N N N N N N 21.593 -3.395  2.146  -4.086 -1.792 -0.729 H10 5V9 29 
5V9 H11 H11 H 0 1 N N N N N N 20.266 -4.348  -0.373 -4.209 0.652  -1.134 H11 5V9 30 
5V9 H12 H12 H 0 1 N N N N N N 21.869 -5.787  1.608  -2.266 1.141  0.512  H12 5V9 31 
5V9 H14 H14 H 0 1 N N N N N N 21.469 -7.039  -0.214 -2.131 -1.057 -1.447 H14 5V9 32 
5V9 H15 H15 H 0 1 N N N N N N 19.816 -6.348  -0.348 -2.039 0.672  -1.862 H15 5V9 33 
5V9 H16 H16 H 0 1 N N N N N N 18.149 -7.839  -0.045 -0.101 1.996  -1.251 H16 5V9 34 
5V9 H17 H17 H 0 1 N N N N N N 17.214 -9.829  1.113  2.310  1.996  -0.762 H17 5V9 35 
5V9 H18 H18 H 0 1 N N N N N N 21.776 -8.197  2.224  -0.318 -2.149 -0.267 H18 5V9 36 
5V9 H19 H19 H 0 1 N N N N N N 20.831 -10.204 3.387  2.092  -2.168 0.227  H19 5V9 37 
5V9 H20 H20 H 0 1 N N N N N N 18.330 -12.895 1.353  4.006  -2.191 0.599  H20 5V9 38 
5V9 H21 H21 H 0 1 N N N N N N 17.354 -14.597 3.159  6.478  -1.839 1.013  H21 5V9 39 
5V9 H22 H22 H 0 1 N N N N N N 18.190 -10.568 5.090  4.240  1.978  -0.368 H22 5V9 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5V9 CAI CAK SING N N 1  
5V9 CAI CAH SING N N 2  
5V9 CAK CAS SING N N 3  
5V9 CAH CAJ SING N N 4  
5V9 CAS NAN SING N N 5  
5V9 CAS CAL SING N N 6  
5V9 CAM CAP SING N N 7  
5V9 CAM NAN SING N N 8  
5V9 CAJ CAL SING N N 9  
5V9 CAD CAP DOUB Y N 10 
5V9 CAD CAF SING Y N 11 
5V9 CAP CAC SING Y N 12 
5V9 CAF CAQ DOUB Y N 13 
5V9 CAC CAE DOUB Y N 14 
5V9 CAQ CAE SING Y N 15 
5V9 CAQ CAR SING N N 16 
5V9 CAB CAR SING Y N 17 
5V9 CAB CAA DOUB Y N 18 
5V9 CAR CAG DOUB Y N 19 
5V9 CAA SAO SING Y N 20 
5V9 CAG SAO SING Y N 21 
5V9 CAK H1  SING N N 22 
5V9 CAK H2  SING N N 23 
5V9 CAI H3  SING N N 24 
5V9 CAI H4  SING N N 25 
5V9 CAH H5  SING N N 26 
5V9 CAH H6  SING N N 27 
5V9 CAJ H7  SING N N 28 
5V9 CAJ H8  SING N N 29 
5V9 CAL H9  SING N N 30 
5V9 CAL H10 SING N N 31 
5V9 CAS H11 SING N N 32 
5V9 NAN H12 SING N N 33 
5V9 CAM H14 SING N N 34 
5V9 CAM H15 SING N N 35 
5V9 CAD H16 SING N N 36 
5V9 CAF H17 SING N N 37 
5V9 CAC H18 SING N N 38 
5V9 CAE H19 SING N N 39 
5V9 CAB H20 SING N N 40 
5V9 CAA H21 SING N N 41 
5V9 CAG H22 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5V9 InChI            InChI                1.03  "InChI=1S/C17H21NS/c1-2-4-17(5-3-1)18-12-14-6-8-15(9-7-14)16-10-11-19-13-16/h6-11,13,17-18H,1-5,12H2" 
5V9 InChIKey         InChI                1.03  DWSHMNMYXHMEJV-UHFFFAOYSA-N                                                                           
5V9 SMILES_CANONICAL CACTVS               3.385 "C1CCC(CC1)NCc2ccc(cc2)c3cscc3"                                                                       
5V9 SMILES           CACTVS               3.385 "C1CCC(CC1)NCc2ccc(cc2)c3cscc3"                                                                       
5V9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1cc(ccc1CNC2CCCCC2)c3ccsc3"                                                                         
5V9 SMILES           "OpenEye OEToolkits" 2.0.4 "c1cc(ccc1CNC2CCCCC2)c3ccsc3"                                                                         
# 
_pdbx_chem_comp_identifier.comp_id           5V9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.4 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(4-thiophen-3-ylphenyl)methyl]cyclohexanamine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5V9 "Create component" 2015-12-07 RCSB 
5V9 "Initial release"  2024-09-11 RCSB 
# 
