data_5K9
# 
_chem_comp.id                                    5K9 
_chem_comp.name                                  "(9~{R},10~{a}~{S})-6,6,9-trimethyl-3-pentyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H32 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-07-12 
_chem_comp.pdbx_modified_date                    2022-12-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        316.478 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5K9 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7P4O 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5K9 C10  C1  C 0 1 N N N 5.453  25.668 -0.583 -2.106 -0.479 -0.117 C10  5K9 1  
5K9 C13  C2  C 0 1 N N N 6.481  23.071 0.186  -4.487 -0.572 1.564  C13  5K9 2  
5K9 C15  C3  C 0 1 N N N 5.297  25.142 0.803  -2.436 -1.729 0.693  C15  5K9 3  
5K9 C17  C4  C 0 1 N N N 5.290  25.181 -3.027 -2.144 1.998  -0.114 C17  5K9 4  
5K9 C20  C5  C 0 1 Y N N 3.387  28.253 -2.393 1.336  1.014  -0.593 C20  5K9 5  
5K9 C21  C6  C 0 1 N N N 6.521  25.878 -3.488 -2.639 1.925  -1.560 C21  5K9 6  
5K9 C22  C7  C 0 1 N N N 4.979  24.049 -4.098 -2.705 3.251  0.561  C22  5K9 7  
5K9 C01  C8  C 0 1 N N N 1.331  32.610 -4.006 8.097  0.082  1.006  C01  5K9 8  
5K9 C02  C9  C 0 1 N N N 0.364  32.621 -2.812 6.596  -0.046 1.273  C02  5K9 9  
5K9 C03  C10 C 0 1 N N N -0.163 31.232 -2.363 5.833  0.047  -0.049 C03  5K9 10 
5K9 C04  C11 C 0 1 N N N 0.859  30.237 -1.727 4.332  -0.081 0.218  C04  5K9 11 
5K9 C05  C12 C 0 1 N N N 2.391  30.488 -1.840 3.569  0.012  -1.105 C05  5K9 12 
5K9 C06  C13 C 0 1 Y N N 3.220  29.287 -1.476 2.091  -0.115 -0.842 C06  5K9 13 
5K9 C07  C14 C 0 1 Y N N 3.794  29.117 -0.171 1.492  -1.360 -0.850 C07  5K9 14 
5K9 C08  C15 C 0 1 Y N N 4.537  27.956 0.094  0.131  -1.473 -0.612 C08  5K9 15 
5K9 C09  C16 C 0 1 Y N N 4.733  26.896 -0.845 -0.631 -0.340 -0.364 C09  5K9 16 
5K9 C11  C17 C 0 1 N N N 5.553  24.737 -1.632 -2.595 0.754  0.649  C11  5K9 17 
5K9 C12  C18 C 0 1 N N N 6.064  23.400 -1.377 -4.115 0.687  0.771  C12  5K9 18 
5K9 C14  C19 C 0 1 N N R 5.489  23.580 1.174  -3.958 -1.818 0.855  C14  5K9 19 
5K9 C16  C20 C 0 1 N N N 6.036  23.223 2.640  -4.609 -1.931 -0.525 C16  5K9 20 
5K9 C19  C21 C 0 1 Y N N 4.121  27.111 -2.098 -0.030 0.909  -0.348 C19  5K9 21 
5K9 O18  O1  O 0 1 N N N 4.250  26.147 -3.091 -0.729 2.044  -0.088 O18  5K9 22 
5K9 O23  O2  O 0 1 N N N 5.132  27.804 1.360  -0.459 -2.698 -0.620 O23  5K9 23 
5K9 H1   H1  H 0 1 N N N 6.486  26.043 -0.537 -2.623 -0.529 -1.075 H1   5K9 24 
5K9 H132 H2  H 0 0 N N N 6.565  21.981 0.304  -4.053 -0.512 2.561  H132 5K9 25 
5K9 H131 H3  H 0 0 N N N 7.455  23.538 0.395  -5.572 -0.636 1.646  H131 5K9 26 
5K9 H152 H4  H 0 0 N N N 6.022  25.692 1.420  -2.072 -2.612 0.168  H152 5K9 27 
5K9 H151 H5  H 0 0 N N N 4.275  25.405 1.115  -1.967 -1.664 1.674  H151 5K9 28 
5K9 H201 H6  H 0 0 N N N 2.930  28.342 -3.368 1.809  1.985  -0.587 H201 5K9 29 
5K9 H213 H7  H 0 0 N N N 6.780  26.676 -2.776 -3.728 1.871  -1.569 H213 5K9 30 
5K9 H211 H8  H 0 0 N N N 7.350  25.157 -3.548 -2.315 2.815  -2.101 H211 5K9 31 
5K9 H212 H9  H 0 0 N N N 6.344  26.316 -4.481 -2.227 1.038  -2.041 H212 5K9 32 
5K9 H221 H10 H 0 0 N N N 4.072  23.502 -3.801 -2.341 3.305  1.587  H221 5K9 33 
5K9 H223 H11 H 0 0 N N N 4.822  24.511 -5.084 -2.381 4.136  0.013  H223 5K9 34 
5K9 H222 H12 H 0 0 N N N 5.828  23.351 -4.151 -3.795 3.205  0.565  H222 5K9 35 
5K9 H013 H13 H 0 0 N N N 1.640  33.640 -4.238 8.302  1.044  0.536  H013 5K9 36 
5K9 H011 H14 H 0 0 N N N 2.218  32.009 -3.754 8.641  0.016  1.949  H011 5K9 37 
5K9 H012 H15 H 0 0 N N N 0.828  32.172 -4.881 8.419  -0.722 0.344  H012 5K9 38 
5K9 H021 H16 H 0 0 N N N 0.886  33.077 -1.958 6.392  -1.008 1.744  H021 5K9 39 
5K9 H022 H17 H 0 0 N N N -0.503 33.240 -3.085 6.275  0.758  1.936  H022 5K9 40 
5K9 H032 H18 H 0 0 N N N -0.957 31.406 -1.621 6.038  1.009  -0.520 H032 5K9 41 
5K9 H031 H19 H 0 0 N N N -0.591 30.741 -3.250 6.155  -0.757 -0.711 H031 5K9 42 
5K9 H042 H20 H 0 0 N N N 0.627  30.193 -0.653 4.128  -1.043 0.688  H042 5K9 43 
5K9 H041 H21 H 0 0 N N N 0.667  29.255 -2.184 4.011  0.723  0.880  H041 5K9 44 
5K9 H052 H22 H 0 0 N N N 2.623  30.771 -2.878 3.773  0.974  -1.576 H052 5K9 45 
5K9 H051 H23 H 0 0 N N N 2.660  31.315 -1.166 3.890  -0.792 -1.767 H051 5K9 46 
5K9 H071 H24 H 0 0 N N N 3.657  29.868 0.592  2.084  -2.243 -1.042 H071 5K9 47 
5K9 H2   H25 H 0 1 N N N 4.512  24.409 -1.497 -2.154 0.760  1.646  H2   5K9 48 
5K9 H121 H26 H 0 0 N N N 5.288  22.680 -1.677 -4.560 0.638  -0.223 H121 5K9 49 
5K9 H122 H27 H 0 0 N N N 6.958  23.257 -2.001 -4.479 1.570  1.295  H122 5K9 50 
5K9 H141 H28 H 0 0 N N N 4.524  23.071 1.031  -4.208 -2.701 1.443  H141 5K9 51 
5K9 H163 H29 H 0 0 N N N 5.324  23.586 3.396  -4.368 -1.047 -1.114 H163 5K9 52 
5K9 H162 H30 H 0 0 N N N 6.146  22.133 2.735  -4.233 -2.820 -1.032 H162 5K9 53 
5K9 H161 H31 H 0 0 N N N 7.013  23.705 2.794  -5.691 -2.008 -0.411 H161 5K9 54 
5K9 H231 H32 H 0 0 N N N 4.936  28.564 1.896  -0.471 -3.134 0.243  H231 5K9 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5K9 C22 C17  SING N N 1  
5K9 C01 C02  SING N N 2  
5K9 C21 C17  SING N N 3  
5K9 O18 C17  SING N N 4  
5K9 O18 C19  SING N N 5  
5K9 C17 C11  SING N N 6  
5K9 C02 C03  SING N N 7  
5K9 C20 C19  DOUB Y N 8  
5K9 C20 C06  SING Y N 9  
5K9 C03 C04  SING N N 10 
5K9 C19 C09  SING Y N 11 
5K9 C05 C04  SING N N 12 
5K9 C05 C06  SING N N 13 
5K9 C11 C12  SING N N 14 
5K9 C11 C10  SING N N 15 
5K9 C06 C07  DOUB Y N 16 
5K9 C12 C13  SING N N 17 
5K9 C09 C10  SING N N 18 
5K9 C09 C08  DOUB Y N 19 
5K9 C10 C15  SING N N 20 
5K9 C07 C08  SING Y N 21 
5K9 C08 O23  SING N N 22 
5K9 C13 C14  SING N N 23 
5K9 C15 C14  SING N N 24 
5K9 C14 C16  SING N N 25 
5K9 C10 H1   SING N N 26 
5K9 C13 H132 SING N N 27 
5K9 C13 H131 SING N N 28 
5K9 C15 H152 SING N N 29 
5K9 C15 H151 SING N N 30 
5K9 C20 H201 SING N N 31 
5K9 C21 H213 SING N N 32 
5K9 C21 H211 SING N N 33 
5K9 C21 H212 SING N N 34 
5K9 C22 H221 SING N N 35 
5K9 C22 H223 SING N N 36 
5K9 C22 H222 SING N N 37 
5K9 C01 H013 SING N N 38 
5K9 C01 H011 SING N N 39 
5K9 C01 H012 SING N N 40 
5K9 C02 H021 SING N N 41 
5K9 C02 H022 SING N N 42 
5K9 C03 H032 SING N N 43 
5K9 C03 H031 SING N N 44 
5K9 C04 H042 SING N N 45 
5K9 C04 H041 SING N N 46 
5K9 C05 H052 SING N N 47 
5K9 C05 H051 SING N N 48 
5K9 C07 H071 SING N N 49 
5K9 C11 H2   SING N N 50 
5K9 C12 H121 SING N N 51 
5K9 C12 H122 SING N N 52 
5K9 C14 H141 SING N N 53 
5K9 C16 H163 SING N N 54 
5K9 C16 H162 SING N N 55 
5K9 C16 H161 SING N N 56 
5K9 O23 H231 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5K9 InChI            InChI                1.03  "InChI=1S/C21H32O2/c1-5-6-7-8-15-12-18(22)20-16-11-14(2)9-10-17(16)21(3,4)23-19(20)13-15/h12-14,16-17,22H,5-11H2,1-4H3/t14-,16+,17+/m1/s1" 
5K9 InChIKey         InChI                1.03  XKRHRBJLCLXSGE-PVAVHDDUSA-N                                                                                                                
5K9 SMILES_CANONICAL CACTVS               3.385 "CCCCCc1cc(O)c2[C@H]3C[C@H](C)CC[C@@H]3C(C)(C)Oc2c1"                                                                                       
5K9 SMILES           CACTVS               3.385 "CCCCCc1cc(O)c2[CH]3C[CH](C)CC[CH]3C(C)(C)Oc2c1"                                                                                           
5K9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCCCCc1cc(c2c(c1)OC(C3C2C[C@@H](CC3)C)(C)C)O"                                                                                             
5K9 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCCCc1cc(c2c(c1)OC(C3C2CC(CC3)C)(C)C)O"                                                                                                  
# 
_pdbx_chem_comp_identifier.comp_id           5K9 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(9~{R})-6,6,9-trimethyl-3-pentyl-6~{a},7,8,9,10,10~{a}-hexahydrobenzo[c]chromen-1-ol" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5K9 "Create component" 2021-07-12 PDBE 
5K9 "Initial release"  2022-12-28 RCSB 
# 
