data_5H9
#

_chem_comp.id                                   5H9
_chem_comp.name                                 "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-4-methyl-L-leucine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H36 N3 O7 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "(6S,9S)-1-(benzyloxy)-6-isobutyl-9-neopentyl-4-oxido-1,4,7-trioxo-2,5,8-triaza-4-phosphadecan-10-oate"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2015-09-25
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       485.511
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5H9
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5DPF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5H9  C1   C1   C  0  1  Y  N  N  17.461  -40.501  12.223   9.709  -0.742   1.264  C1   5H9   1  
5H9  C2   C2   C  0  1  Y  N  N  16.358  -40.254  13.023   8.601  -1.175   1.968  C2   5H9   2  
5H9  C3   C3   C  0  1  Y  N  N  15.098  -40.715  12.650   7.373  -1.261   1.339  C3   5H9   3  
5H9  C7   C4   C  0  1  N  N  N  13.575  -41.899  11.029   5.914  -1.006  -0.679  C7   5H9   4  
5H9  C9   C5   C  0  1  N  N  N  12.963  -41.022   8.823   3.987   0.338  -1.098  C9   5H9   5  
5H9  C11  C6   C  0  1  N  N  N  12.005  -40.288   6.767   1.950   1.572  -1.613  C11  5H9   6  
5H9  C14  C7   C  0  1  N  N  S  10.041  -38.695   3.706  -1.901   1.105  -0.058  C14  5H9   7  
5H9  C15  C8   C  0  1  N  N  N   8.846  -39.601   3.915  -3.060   0.370  -0.679  C15  5H9   8  
5H9  O17  O1   O  0  1  N  N  N  13.730  -41.834   8.281   3.524  -0.617  -1.689  O17  5H9   9  
5H9  C20  C9   C  0  1  N  N  N  10.451  -38.727   2.228  -2.375   2.469   0.449  C20  5H9  10  
5H9  C21  C10  C  0  1  N  N  N   9.415  -38.126   1.268  -3.351   2.270   1.611  C21  5H9  11  
5H9  C22  C11  C  0  1  N  N  N   9.791  -38.452  -0.183  -2.605   1.676   2.807  C22  5H9  12  
5H9  C27  C12  C  0  1  N  N  N   7.650  -42.731   1.835  -4.610  -3.091   0.541  C27  5H9  13  
5H9  C30  C13  C  0  1  N  N  N   6.227  -42.161   1.874  -3.345  -2.540   1.203  C30  5H9  14  
5H9  C31  C14  C  0  1  N  N  N   8.335  -42.647   5.608  -6.225   0.148  -0.702  C31  5H9  15  
5H9  C4   C15  C  0  1  Y  N  N  14.939  -41.393  11.450   7.253  -0.913   0.007  C4   5H9  16  
5H9  O8   O2   O  0  1  N  N  N  12.866  -40.942  10.237   5.209   0.255  -0.537  O8   5H9  17  
5H9  N10  N1   N  0  1  N  N  N  12.270  -40.144   8.165   3.279   1.481  -1.003  N10  5H9  18  
5H9  P12  P1   P  0  1  N  N  N  11.444  -38.724   6.080   0.680   1.192  -0.362  P12  5H9  19  
5H9  O19  O3   O  0  1  N  N  N  12.507  -37.697   6.262   0.779   2.161   0.752  O19  5H9  20  
5H9  O18  O4   O  0  1  N  N  N  10.094  -38.256   6.616   0.911  -0.299   0.202  O18  5H9  21  
5H9  N13  N2   N  0  1  N  N  N  11.225  -39.123   4.481  -0.847   1.296  -1.062  N13  5H9  22  
5H9  C23  C16  C  0  1  N  N  N   9.261  -36.618   1.422  -3.955   3.620   2.006  C23  5H9  23  
5H9  O24  O5   O  0  1  N  N  N   7.725  -39.094   3.902  -3.174   0.327  -1.886  O24  5H9  24  
5H9  N16  N3   N  0  1  N  N  N   9.103  -40.921   4.082  -3.970  -0.240   0.106  N16  5H9  25  
5H9  C25  C17  C  0  1  N  N  S   8.071  -41.919   4.310  -5.143  -0.880  -0.494  C25  5H9  26  
5H9  O33  O6   O  0  1  N  N  N   9.525  -42.738   6.044  -6.036   1.297  -0.382  O33  5H9  27  
5H9  O32  O7   O  0  1  N  N  N   7.352  -43.174   6.180  -7.400  -0.213  -1.243  O32  5H9  28  
5H9  C26  C18  C  0  1  N  N  N   8.145  -43.035   3.251  -5.657  -1.980   0.438  C26  5H9  29  
5H9  C29  C19  C  0  1  N  N  N   7.569  -44.040   1.050  -4.271  -3.604  -0.859  C29  5H9  30  
5H9  C28  C20  C  0  1  N  N  N   8.598  -41.783   1.091  -5.167  -4.240   1.384  C28  5H9  31  
5H9  C5   C21  C  0  1  Y  N  N  16.057  -41.641  10.645   8.361  -0.479  -0.697  C5   5H9  32  
5H9  C6   C22  C  0  1  Y  N  N  17.315  -41.203  11.029   9.588  -0.388  -0.067  C6   5H9  33  
5H9  H1   H1   H  0  1  N  N  N  18.436  -40.149  12.525  10.669  -0.675   1.755  H1   5H9  34  
5H9  H2   H2   H  0  1  N  N  N  16.476  -39.700  13.943   8.695  -1.447   3.009  H2   5H9  35  
5H9  H3   H3   H  0  1  N  N  N  14.247  -40.545  13.293   6.507  -1.599   1.889  H3   5H9  36  
5H9  H4   H4   H  0  1  N  N  N  12.985  -42.120  11.931   6.062  -1.223  -1.737  H4   5H9  37  
5H9  H5   H5   H  0  1  N  N  N  13.704  -42.820  10.441   5.328  -1.804  -0.223  H5   5H9  38  
5H9  H6   H6   H  0  1  N  N  N  11.225  -41.050   6.621   1.794   2.580  -1.995  H6   5H9  39  
5H9  H7   H7   H  0  1  N  N  N  12.925  -40.602   6.253   1.877   0.857  -2.433  H7   5H9  40  
5H9  H8   H8   H  0  1  N  N  N   9.769  -37.665   3.981  -1.508   0.525   0.776  H8   5H9  41  
5H9  H9   H9   H  0  1  N  N  N  10.619  -39.775   1.940  -1.517   3.049   0.790  H9   5H9  42  
5H9  H10  H10  H  0  1  N  N  N  11.389  -38.162   2.119  -2.876   3.003  -0.359  H10  5H9  43  
5H9  H11  H11  H  0  1  N  N  N   8.442  -38.593   1.481  -4.147   1.592   1.305  H11  5H9  44  
5H9  H12  H12  H  0  1  N  N  N   9.903  -39.540  -0.298  -3.311   1.472   3.611  H12  5H9  45  
5H9  H13  H13  H  0  1  N  N  N   8.999  -38.092  -0.857  -2.118   0.748   2.507  H13  5H9  46  
5H9  H14  H14  H  0  1  N  N  N  10.740  -37.957  -0.436  -1.853   2.385   3.155  H14  5H9  47  
5H9  H15  H15  H  0  1  N  N  N   6.227  -41.212   2.431  -3.606  -2.070   2.151  H15  5H9  48  
5H9  H16  H16  H  0  1  N  N  N   5.875  -41.984   0.847  -2.644  -3.355   1.382  H16  5H9  49  
5H9  H17  H17  H  0  1  N  N  N   5.558  -42.878   2.372  -2.884  -1.801   0.547  H17  5H9  50  
5H9  H18  H18  H  0  1  N  N  N  11.912  -39.345   8.648   3.649   2.243  -0.531  H18  5H9  51  
5H9  H19  H19  H  0  1  N  N  N  10.181  -37.380   6.974   0.860  -0.987  -0.475  H19  5H9  52  
5H9  H20  H20  H  0  1  N  N  N  11.236  -40.122   4.441  -0.944   0.635  -1.818  H20  5H9  53  
5H9  H21  H21  H  0  1  N  N  N   8.991  -36.381   2.462  -4.486   4.043   1.154  H21  5H9  54  
5H9  H22  H22  H  0  1  N  N  N  10.211  -36.125   1.168  -4.649   3.478   2.834  H22  5H9  55  
5H9  H23  H23  H  0  1  N  N  N   8.470  -36.260   0.747  -3.159   4.299   2.312  H23  5H9  56  
5H9  H24  H24  H  0  1  N  N  N  10.055  -41.225   4.046  -3.848  -0.256   1.068  H24  5H9  57  
5H9  H25  H25  H  0  1  N  N  N   7.068  -41.467   4.316  -4.868  -1.317  -1.454  H25  5H9  58  
5H9  H26  H26  H  0  1  N  N  N   7.646  -43.630   6.960  -8.063   0.481  -1.357  H26  5H9  59  
5H9  H27  H27  H  0  1  N  N  N   7.551  -43.881   3.628  -6.584  -2.391   0.039  H27  5H9  60  
5H9  H28  H28  H  0  1  N  N  N   9.200  -43.335   3.169  -5.841  -1.561   1.427  H28  5H9  61  
5H9  H29  H29  H  0  1  N  N  N   6.893  -44.737   1.567  -3.525  -4.395  -0.786  H29  5H9  62  
5H9  H30  H30  H  0  1  N  N  N   7.185  -43.838   0.039  -5.172  -3.997  -1.331  H30  5H9  63  
5H9  H31  H31  H  0  1  N  N  N   8.571  -44.487   0.979  -3.874  -2.785  -1.460  H31  5H9  64  
5H9  H32  H32  H  0  1  N  N  N   8.672  -40.832   1.639  -5.409  -3.874   2.382  H32  5H9  65  
5H9  H33  H33  H  0  1  N  N  N   9.595  -42.243   1.019  -6.068  -4.632   0.913  H33  5H9  66  
5H9  H34  H34  H  0  1  N  N  N   8.208  -41.594   0.080  -4.422  -5.031   1.458  H34  5H9  67  
5H9  H35  H35  H  0  1  N  N  N  15.938  -42.179   9.716   8.266  -0.202  -1.737  H35  5H9  68  
5H9  H36  H36  H  0  1  N  N  N  18.175  -41.405  10.407  10.454  -0.049  -0.617  H36  5H9  69  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5H9  C22  C21  SING  N  N   1  
5H9  C29  C27  SING  N  N   2  
5H9  C28  C27  SING  N  N   3  
5H9  C21  C23  SING  N  N   4  
5H9  C21  C20  SING  N  N   5  
5H9  C27  C30  SING  N  N   6  
5H9  C27  C26  SING  N  N   7  
5H9  C20  C14  SING  N  N   8  
5H9  C26  C25  SING  N  N   9  
5H9  C14  C15  SING  N  N  10  
5H9  C14  N13  SING  N  N  11  
5H9  O24  C15  DOUB  N  N  12  
5H9  C15  N16  SING  N  N  13  
5H9  N16  C25  SING  N  N  14  
5H9  C25  C31  SING  N  N  15  
5H9  N13  P12  SING  N  N  16  
5H9  C31  O33  DOUB  N  N  17  
5H9  C31  O32  SING  N  N  18  
5H9  P12  O19  DOUB  N  N  19  
5H9  P12  O18  SING  N  N  20  
5H9  P12  C11  SING  N  N  21  
5H9  C11  N10  SING  N  N  22  
5H9  N10  C9   SING  N  N  23  
5H9  O17  C9   DOUB  N  N  24  
5H9  C9   O8   SING  N  N  25  
5H9  O8   C7   SING  N  N  26  
5H9  C5   C6   DOUB  Y  N  27  
5H9  C5   C4   SING  Y  N  28  
5H9  C6   C1   SING  Y  N  29  
5H9  C7   C4   SING  N  N  30  
5H9  C4   C3   DOUB  Y  N  31  
5H9  C1   C2   DOUB  Y  N  32  
5H9  C3   C2   SING  Y  N  33  
5H9  C1   H1   SING  N  N  34  
5H9  C2   H2   SING  N  N  35  
5H9  C3   H3   SING  N  N  36  
5H9  C7   H4   SING  N  N  37  
5H9  C7   H5   SING  N  N  38  
5H9  C11  H6   SING  N  N  39  
5H9  C11  H7   SING  N  N  40  
5H9  C14  H8   SING  N  N  41  
5H9  C20  H9   SING  N  N  42  
5H9  C20  H10  SING  N  N  43  
5H9  C21  H11  SING  N  N  44  
5H9  C22  H12  SING  N  N  45  
5H9  C22  H13  SING  N  N  46  
5H9  C22  H14  SING  N  N  47  
5H9  C30  H15  SING  N  N  48  
5H9  C30  H16  SING  N  N  49  
5H9  C30  H17  SING  N  N  50  
5H9  N10  H18  SING  N  N  51  
5H9  O18  H19  SING  N  N  52  
5H9  N13  H20  SING  N  N  53  
5H9  C23  H21  SING  N  N  54  
5H9  C23  H22  SING  N  N  55  
5H9  C23  H23  SING  N  N  56  
5H9  N16  H24  SING  N  N  57  
5H9  C25  H25  SING  N  N  58  
5H9  O32  H26  SING  N  N  59  
5H9  C26  H27  SING  N  N  60  
5H9  C26  H28  SING  N  N  61  
5H9  C29  H29  SING  N  N  62  
5H9  C29  H30  SING  N  N  63  
5H9  C29  H31  SING  N  N  64  
5H9  C28  H32  SING  N  N  65  
5H9  C28  H33  SING  N  N  66  
5H9  C28  H34  SING  N  N  67  
5H9  C5   H35  SING  N  N  68  
5H9  C6   H36  SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5H9  SMILES            ACDLabs               12.01  "c1ccc(COC(=O)NCP(=O)(O)NC(C(NC(C(=O)O)CC(C)(C)C)=O)CC(C)C)cc1"  
5H9  InChI             InChI                 1.03   "InChI=1S/C22H36N3O7P/c1-15(2)11-17(19(26)24-18(20(27)28)12-22(3,4)5)25-33(30,31)14-23-21(29)32-13-16-9-7-6-8-10-16/h6-10,15,17-18H,11-14H2,1-5H3,(H,23,29)(H,24,26)(H,27,28)(H2,25,30,31)/t17-,18-/m0/s1"  
5H9  InChIKey          InChI                 1.03   DFAPONQEYRMEDO-ROUUACIJSA-N  
5H9  SMILES_CANONICAL  CACTVS                3.385  "CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[C@@H](CC(C)(C)C)C(O)=O"  
5H9  SMILES            CACTVS                3.385  "CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)N[CH](CC(C)(C)C)C(O)=O"  
5H9  SMILES_CANONICAL  "OpenEye OEToolkits"  1.9.2  "CC(C)C[C@@H](C(=O)N[C@@H](CC(C)(C)C)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O"  
5H9  SMILES            "OpenEye OEToolkits"  1.9.2  "CC(C)CC(C(=O)NC(CC(C)(C)C)C(=O)O)NP(=O)(CNC(=O)OCc1ccccc1)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5H9  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-[(S)-({[(benzyloxy)carbonyl]amino}methyl)(hydroxy)phosphoryl]-L-leucyl-4-methyl-L-leucine"  
5H9  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.9.2  "(2S)-4,4-dimethyl-2-[[(2S)-4-methyl-2-[[oxidanyl(phenylmethoxycarbonylaminomethyl)phosphoryl]amino]pentanoyl]amino]pentanoic acid"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5H9  "Create component"  2015-09-25  EBI   
5H9  "Initial release"   2015-10-28  RCSB  
5H9  "Modify synonyms"   2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     5H9
_pdbx_chem_comp_synonyms.name        "(6S,9S)-1-(benzyloxy)-6-isobutyl-9-neopentyl-4-oxido-1,4,7-trioxo-2,5,8-triaza-4-phosphadecan-10-oate"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
