data_379
# 
_chem_comp.id                                    379 
_chem_comp.name                                  "3-{[(R)-1-amino-3-(pyridin-3-yl)propyl](hydroxy)phosphoryl}-(S)-2-benzylpropanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H23 N2 O4 P" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-06-27 
_chem_comp.pdbx_modified_date                    2014-09-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        362.360 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     379 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4QIR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
379 P11 P11 P 0 1 N N N 9.264  44.326 15.085 -0.472 0.840  -0.094 P11 379 1  
379 C1  C1  C 0 1 N N N 11.693 43.778 16.294 -3.161 1.380  -0.061 C1  379 2  
379 C3  C3  C 0 1 N N R 11.067 44.530 15.131 -1.822 1.968  0.387  C3  379 3  
379 C6  C6  C 0 1 N N N 13.201 43.687 16.236 -3.371 0.020  0.608  C6  379 4  
379 C8  C8  C 0 1 Y N N 13.749 42.935 17.454 -4.690 -0.559 0.167  C8  379 5  
379 N10 N10 N 0 1 N N N 11.370 45.964 15.198 -1.621 3.274  -0.256 N10 379 6  
379 C11 C11 C 0 1 N N N 8.753  42.592 14.888 1.124  1.541  0.440  C11 379 7  
379 O12 O12 O 0 1 N N N 8.702  45.107 13.929 -0.470 0.657  -1.693 O12 379 8  
379 C13 C13 C 0 1 N N S 8.358  41.869 16.167 2.243  0.539  0.149  C13 379 9  
379 O13 O13 O 0 1 N N N 8.704  44.728 16.358 -0.675 -0.475 0.554  O13 379 10 
379 C15 C15 C 0 1 N N N 9.461  40.964 16.646 2.191  -0.578 1.159  C15 379 11 
379 C16 C16 C 0 1 N N N 7.256  40.892 15.875 3.597  1.247  0.241  C16 379 12 
379 C01 C01 C 0 1 Y N N 15.027 43.206 17.903 -4.761 -1.362 -0.956 C01 379 13 
379 C17 C17 C 0 1 Y N N 5.877  41.440 16.181 4.690  0.292  -0.165 C17 379 14 
379 N18 N18 N 0 1 Y N N 15.534 42.546 18.980 -5.913 -1.873 -1.348 N18 379 15 
379 C19 C19 C 0 1 Y N N 14.781 41.603 19.632 -7.033 -1.641 -0.692 C19 379 16 
379 C20 C20 C 0 1 Y N N 13.494 41.289 19.181 -7.039 -0.847 0.439  C20 379 17 
379 C21 C21 C 0 1 Y N N 12.997 41.968 18.108 -5.847 -0.297 0.885  C21 379 18 
379 O23 O23 O 0 1 N N N 9.703  40.778 17.868 1.346  -0.574 2.022  O23 379 19 
379 O24 O24 O 0 1 N N N 10.156 40.403 15.795 3.085  -1.579 1.099  O24 379 20 
379 C36 C36 C 0 1 Y N N 5.051  41.785 15.120 5.082  0.212  -1.488 C36 379 21 
379 C37 C37 C 0 1 Y N N 3.774  42.266 15.352 6.085  -0.663 -1.860 C37 379 22 
379 C38 C38 C 0 1 Y N N 3.311  42.407 16.656 6.697  -1.458 -0.909 C38 379 23 
379 C39 C39 C 0 1 Y N N 4.127  42.062 17.725 6.306  -1.377 0.414  C39 379 24 
379 C40 C40 C 0 1 Y N N 5.412  41.575 17.489 5.306  -0.498 0.787  C40 379 25 
379 H1  H1  H 0 1 N N N 11.414 44.291 17.226 -3.968 2.054  0.226  H1  379 26 
379 H2  H2  H 0 1 N N N 11.286 42.756 16.302 -3.160 1.256  -1.144 H2  379 27 
379 H12 H12 H 0 1 N N N 11.443 44.112 14.186 -1.824 2.092  1.469  H12 379 28 
379 H6  H6  H 0 1 N N N 13.495 43.153 15.320 -2.564 -0.654 0.321  H6  379 29 
379 H7  H7  H 0 1 N N N 13.623 44.703 16.220 -3.372 0.145  1.691  H7  379 30 
379 H11 H11 H 0 1 N N N 12.361 46.095 15.224 -1.615 3.185  -1.261 H11 379 31 
379 H13 H13 H 0 1 N N N 10.994 46.422 14.392 -2.320 3.936  0.045  H13 379 32 
379 H16 H16 H 0 1 N N N 7.889  42.570 14.207 1.314  2.467  -0.103 H16 379 33 
379 H17 H17 H 0 1 N N N 9.591  42.043 14.435 1.090  1.748  1.510  H17 379 34 
379 H4  H4  H 0 1 N N N 8.067  45.737 14.250 -0.342 1.480  -2.183 H4  379 35 
379 H18 H18 H 0 1 N N N 8.061  42.584 16.949 2.114  0.130  -0.853 H18 379 36 
379 H19 H19 H 0 1 N N N 7.298  40.626 14.808 3.602  2.109  -0.426 H19 379 37 
379 H20 H20 H 0 1 N N N 7.417  39.991 16.484 3.765  1.578  1.265  H20 379 38 
379 H8  H8  H 0 1 N N N 15.628 43.947 17.396 -3.864 -1.574 -1.518 H8  379 39 
379 H10 H10 H 0 1 N N N 15.184 41.100 20.499 -7.957 -2.076 -1.044 H10 379 40 
379 H14 H14 H 0 1 N N N 12.908 40.526 19.672 -7.960 -0.661 0.971  H14 379 41 
379 H15 H15 H 0 1 N N N 11.998 41.749 17.760 -5.821 0.324  1.768  H15 379 42 
379 H9  H9  H 0 1 N N N 10.819 39.875 16.225 3.012  -2.273 1.768  H9  379 43 
379 H21 H21 H 0 1 N N N 5.407  41.677 14.106 4.604  0.833  -2.232 H21 379 44 
379 H22 H22 H 0 1 N N N 3.137  42.532 14.521 6.390  -0.727 -2.894 H22 379 45 
379 H25 H25 H 0 1 N N N 2.316  42.785 16.837 7.480  -2.142 -1.200 H25 379 46 
379 H23 H23 H 0 1 N N N 3.767  42.171 18.737 6.784  -1.998 1.158  H23 379 47 
379 H24 H24 H 0 1 N N N 6.047  41.302 18.319 5.003  -0.432 1.822  H24 379 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
379 P11 C3  SING N N 1  
379 P11 C11 SING N N 2  
379 P11 O12 SING N N 3  
379 P11 O13 DOUB N N 4  
379 C1  C3  SING N N 5  
379 C1  C6  SING N N 6  
379 C3  N10 SING N N 7  
379 C6  C8  SING N N 8  
379 C8  C01 DOUB Y N 9  
379 C8  C21 SING Y N 10 
379 C11 C13 SING N N 11 
379 C13 C15 SING N N 12 
379 C13 C16 SING N N 13 
379 C15 O23 DOUB N N 14 
379 C15 O24 SING N N 15 
379 C16 C17 SING N N 16 
379 C01 N18 SING Y N 17 
379 C17 C36 DOUB Y N 18 
379 C17 C40 SING Y N 19 
379 N18 C19 DOUB Y N 20 
379 C19 C20 SING Y N 21 
379 C20 C21 DOUB Y N 22 
379 C36 C37 SING Y N 23 
379 C37 C38 DOUB Y N 24 
379 C38 C39 SING Y N 25 
379 C39 C40 DOUB Y N 26 
379 C1  H1  SING N N 27 
379 C1  H2  SING N N 28 
379 C3  H12 SING N N 29 
379 C6  H6  SING N N 30 
379 C6  H7  SING N N 31 
379 N10 H11 SING N N 32 
379 N10 H13 SING N N 33 
379 C11 H16 SING N N 34 
379 C11 H17 SING N N 35 
379 O12 H4  SING N N 36 
379 C13 H18 SING N N 37 
379 C16 H19 SING N N 38 
379 C16 H20 SING N N 39 
379 C01 H8  SING N N 40 
379 C19 H10 SING N N 41 
379 C20 H14 SING N N 42 
379 C21 H15 SING N N 43 
379 O24 H9  SING N N 44 
379 C36 H21 SING N N 45 
379 C37 H22 SING N N 46 
379 C38 H25 SING N N 47 
379 C39 H23 SING N N 48 
379 C40 H24 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
379 SMILES           ACDLabs              12.01 "O=C(O)C(Cc1ccccc1)CP(=O)(O)C(N)CCc2cccnc2"                                                                                                                        
379 InChI            InChI                1.03  "InChI=1S/C18H23N2O4P/c19-17(9-8-15-7-4-10-20-12-15)25(23,24)13-16(18(21)22)11-14-5-2-1-3-6-14/h1-7,10,12,16-17H,8-9,11,13,19H2,(H,21,22)(H,23,24)/t16-,17-/m1/s1" 
379 InChIKey         InChI                1.03  LWRKOPLMYMXZKW-IAGOWNOFSA-N                                                                                                                                        
379 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CCc1cccnc1)[P](O)(=O)C[C@@H](Cc2ccccc2)C(O)=O"                                                                                                            
379 SMILES           CACTVS               3.385 "N[CH](CCc1cccnc1)[P](O)(=O)C[CH](Cc2ccccc2)C(O)=O"                                                                                                                
379 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)C[C@H](CP(=O)([C@H](CCc2cccnc2)N)O)C(=O)O"                                                                                                              
379 SMILES           "OpenEye OEToolkits" 1.7.6 "c1ccc(cc1)CC(CP(=O)(C(CCc2cccnc2)N)O)C(=O)O"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
379 "SYSTEMATIC NAME" ACDLabs              12.01 "(2S)-3-[(S)-[(1R)-1-amino-3-(pyridin-3-yl)propyl](hydroxy)phosphoryl]-2-benzylpropanoic acid"       
379 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2S)-2-[[[(1R)-1-azanyl-3-pyridin-3-yl-propyl]-oxidanyl-phosphoryl]methyl]-3-phenyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
379 "Create component" 2014-06-27 RCSB 
379 "Modify name"      2014-06-27 RCSB 
379 "Initial release"  2014-09-24 RCSB 
# 
