data_YH8
# 
_chem_comp.id                                    YH8 
_chem_comp.name                                  "2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-7-oxidanylidene-6-[4-(3-oxidanylpyridin-2-yl)carbonylpiperazin-1-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]-~{N}-[2-methyl-4-(trifluoromethyl)phenyl]ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H33 F3 N8 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-06-16 
_chem_comp.pdbx_modified_date                    2024-04-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        666.650 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     YH8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8PFL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
YH8 C1  C1  C 0 1 N N N N N N -32.390 -7.129 22.888 4.813  6.246  0.863  C1  YH8 1  
YH8 C2  C2  C 0 1 N N N N N N -31.324 -6.102 23.086 3.796  5.231  0.424  C2  YH8 2  
YH8 C3  C3  C 0 1 N N N N N N -30.265 -6.342 23.905 2.539  5.271  0.815  C3  YH8 3  
YH8 C41 C4  C 0 1 Y N N N N N -19.501 -2.584 25.968 -6.882 -1.638 0.768  C41 YH8 4  
YH8 C43 C5  C 0 1 Y N N N N N -17.831 -1.775 24.594 -6.208 -3.138 2.386  C43 YH8 5  
YH8 C44 C6  C 0 1 Y N N N N N -17.144 -2.964 24.630 -7.388 -3.858 2.271  C44 YH8 6  
YH8 C45 C7  C 0 1 Y N N N N N -17.667 -4.003 25.376 -8.347 -3.450 1.362  C45 YH8 7  
YH8 C46 C8  C 0 1 Y N N N N N -18.866 -3.823 26.060 -8.096 -2.313 0.597  C46 YH8 8  
YH8 C48 C9  C 0 1 N N N N N N -26.382 0.569  25.055 -0.989 -0.108 -3.809 C48 YH8 9  
YH8 C11 C10 C 0 1 N N N N N N -26.579 -1.776 24.172 -0.549 0.743  -1.522 C11 YH8 10 
YH8 C12 C11 C 0 1 N N N N N N -25.779 -2.694 24.815 -1.591 1.279  -0.840 C12 YH8 11 
YH8 C13 C12 C 0 1 N N N N N N -26.193 -4.052 25.075 -1.390 2.447  -0.067 C13 YH8 12 
YH8 C16 C13 C 0 1 N N N N N N -26.072 -0.382 23.909 -0.749 -0.500 -2.350 C16 YH8 13 
YH8 C19 C14 C 0 1 N N N N N N -24.248 -2.234 26.708 -3.982 1.366  -1.561 C19 YH8 14 
YH8 C20 C15 C 0 1 N N N N N N -23.006 -1.376 26.907 -5.146 1.470  -0.567 C20 YH8 15 
YH8 C22 C16 C 0 1 N N N N N N -22.121 -2.048 24.728 -4.257 -0.542 0.683  C22 YH8 16 
YH8 C23 C17 C 0 1 N N N N N N -23.346 -2.921 24.461 -3.094 -0.646 -0.311 C23 YH8 17 
YH8 C24 C18 C 0 1 Y N N N N N -31.496 1.219  26.028 4.740  -3.034 -1.646 C24 YH8 18 
YH8 C25 C19 C 0 1 Y N N N N N -32.588 1.664  26.762 5.325  -4.025 -0.883 C25 YH8 19 
YH8 C26 C20 C 0 1 Y N N N N N -33.883 1.575  26.276 5.348  -3.916 0.496  C26 YH8 20 
YH8 C27 C21 C 0 1 Y N N N N N -34.098 1.024  25.019 4.786  -2.815 1.115  C27 YH8 21 
YH8 C28 C22 C 0 1 Y N N N N N -33.043 0.561  24.254 4.200  -1.819 0.357  C28 YH8 22 
YH8 C29 C23 C 0 1 Y N N N N N -31.741 0.654  24.749 4.180  -1.924 -1.028 C29 YH8 23 
YH8 C30 C24 C 0 1 N N N N N N -35.034 2.047  27.107 5.987  -5.000 1.325  C30 YH8 24 
YH8 C4  C25 C 0 1 N N N N N N -30.079 -7.675 24.605 2.015  6.345  1.729  C4  YH8 25 
YH8 C5  C26 C 0 1 N N N N N N -31.380 -8.505 24.530 3.188  7.051  2.415  C5  YH8 26 
YH8 O6  O1  O 0 1 N N N N N N -31.962 -8.447 23.226 4.160  7.389  1.418  O6  YH8 27 
YH8 C7  C27 C 0 1 Y N N N N N -29.266 -5.305 24.122 1.610  4.225  0.338  C7  YH8 28 
YH8 N8  N1  N 0 1 Y N N N N N -27.474 -4.341 24.606 -0.170 3.011  -0.016 N8  YH8 29 
YH8 C9  C28 C 0 1 Y N N N N N -28.272 -3.462 23.975 0.872  2.467  -0.703 C9  YH8 30 
YH8 N10 N2  N 0 1 N N N N N N -27.874 -2.165 23.746 0.683  1.335  -1.462 N10 YH8 31 
YH8 N14 N3  N 0 1 Y N N N N N -28.093 -5.563 24.710 0.332  4.141  0.645  N14 YH8 32 
YH8 N15 N4  N 0 1 Y N N N N N -29.442 -4.005 23.685 1.934  3.212  -0.478 N15 YH8 33 
YH8 N17 N5  N 0 1 N N N N N N -24.497 -2.481 25.275 -2.862 0.679  -0.902 N17 YH8 34 
YH8 O18 O2  O 0 1 N N N N N N -25.537 -4.913 25.642 -2.319 2.939  0.551  O18 YH8 35 
YH8 N21 N6  N 0 1 N N N N N N -21.871 -1.952 26.174 -5.377 0.145  0.025  N21 YH8 36 
YH8 F31 F1  F 0 1 N N N N N N -35.969 1.187  27.176 7.342  -4.706 1.513  F31 YH8 37 
YH8 F32 F2  F 0 1 N N N N N N -34.734 2.261  28.359 5.349  -5.073 2.568  F32 YH8 38 
YH8 F33 F3  F 0 1 N N N N N N -35.561 3.140  26.643 5.863  -6.227 0.665  F33 YH8 39 
YH8 N34 N7  N 0 1 N N N N N N -30.680 0.159  23.948 3.587  -0.917 -1.798 N34 YH8 40 
YH8 C35 C29 C 0 1 N N N N N N -29.801 -0.799 24.303 2.513  -0.252 -1.326 C35 YH8 41 
YH8 O36 O3  O 0 1 N N N N N N -29.714 -1.262 25.431 2.115  -0.463 -0.200 O36 YH8 42 
YH8 C37 C30 C 0 1 N N N N N N -28.838 -1.216 23.205 1.808  0.755  -2.198 C37 YH8 43 
YH8 C38 C31 C 0 1 N N N N N N -30.107 1.433  26.573 4.716  -3.154 -3.148 C38 YH8 44 
YH8 C39 C32 C 0 1 N N N N N N -20.733 -2.321 26.794 -6.595 -0.430 -0.034 C39 YH8 45 
YH8 O40 O4  O 0 1 N N N N N N -20.647 -2.424 28.006 -7.457 0.046  -0.747 O40 YH8 46 
YH8 N42 N8  N 0 1 Y N N N N N -18.994 -1.568 25.243 -5.989 -2.072 1.650  N42 YH8 47 
YH8 O47 O5  O 0 1 N N N N N N -19.358 -4.838 26.812 -9.012 -1.869 -0.299 O47 YH8 48 
YH8 H1  H1  H 0 1 N N N N N N -33.251 -6.867 23.520 5.465  5.802  1.615  H1  YH8 49 
YH8 H2  H2  H 0 1 N N N N N N -32.694 -7.119 21.831 5.411  6.552  0.005  H2  YH8 50 
YH8 H3  H3  H 0 1 N N N N N N -31.395 -5.155 22.571 4.107  4.437  -0.238 H3  YH8 51 
YH8 H4  H4  H 0 1 N N N N N N -17.417 -0.963 24.015 -5.458 -3.456 3.096  H4  YH8 52 
YH8 H5  H5  H 0 1 N N N N N N -16.217 -3.084 24.088 -7.554 -4.733 2.882  H5  YH8 53 
YH8 H6  H6  H 0 1 N N N N N N -17.149 -4.949 25.428 -9.274 -3.994 1.255  H6  YH8 54 
YH8 H7  H7  H 0 1 N N N N N N -25.993 1.570  24.817 -1.133 -1.007 -4.408 H7  YH8 55 
YH8 H8  H8  H 0 1 N N N N N N -27.471 0.624  25.202 -1.878 0.519  -3.875 H8  YH8 56 
YH8 H9  H9  H 0 1 N N N N N N -25.906 0.201  25.976 -0.126 0.443  -4.184 H9  YH8 57 
YH8 H10 H10 H 0 1 N N N N N N -24.982 -0.423 23.768 -1.611 -1.052 -1.975 H10 YH8 58 
YH8 H11 H11 H 0 1 N N N N N N -26.547 0.000  22.993 0.140  -1.128 -2.284 H11 YH8 59 
YH8 H12 H12 H 0 1 N N N N N N -25.117 -1.715 27.140 -4.298 0.797  -2.435 H12 YH8 60 
YH8 H13 H13 H 0 1 N N N N N N -24.105 -3.197 27.219 -3.673 2.365  -1.867 H13 YH8 61 
YH8 H14 H14 H 0 1 N N N N N N -22.762 -1.332 27.979 -4.894 2.182  0.219  H14 YH8 62 
YH8 H15 H15 H 0 1 N N N N N N -23.202 -0.360 26.534 -6.044 1.803  -1.088 H15 YH8 63 
YH8 H16 H16 H 0 1 N N N N N N -21.243 -2.493 24.236 -4.569 -1.542 0.987  H16 YH8 64 
YH8 H17 H17 H 0 1 N N N N N N -22.297 -1.041 24.322 -3.944 0.025  1.559  H17 YH8 65 
YH8 H18 H18 H 0 1 N N N N N N -23.611 -2.852 23.396 -2.195 -0.976 0.211  H18 YH8 66 
YH8 H19 H19 H 0 1 N N N N N N -23.106 -3.965 24.712 -3.346 -1.359 -1.096 H19 YH8 67 
YH8 H20 H20 H 0 1 N N N N N N -32.423 2.092  27.740 5.765  -4.887 -1.363 H20 YH8 68 
YH8 H21 H21 H 0 1 N N N N N N -35.104 0.956  24.633 4.805  -2.733 2.191  H21 YH8 69 
YH8 H22 H22 H 0 1 N N N N N N -33.225 0.130  23.280 3.765  -0.957 0.841  H22 YH8 70 
YH8 H23 H23 H 0 1 N N N N N N -29.265 -8.231 24.117 1.444  7.069  1.149  H23 YH8 71 
YH8 H24 H24 H 0 1 N N N N N N -29.821 -7.498 25.660 1.370  5.895  2.484  H24 YH8 72 
YH8 H25 H25 H 0 1 N N N N N N -32.100 -8.108 25.261 2.833  7.959  2.904  H25 YH8 73 
YH8 H26 H26 H 0 1 N N N N N N -31.150 -9.553 24.773 3.633  6.387  3.156  H26 YH8 74 
YH8 H27 H27 H 0 1 N N N N N N -30.575 0.557  23.037 3.948  -0.698 -2.671 H27 YH8 75 
YH8 H28 H28 H 0 1 N N N N N N -28.308 -0.330 22.825 1.438  0.261  -3.097 H28 YH8 76 
YH8 H29 H29 H 0 1 N N N N N N -29.398 -1.688 22.385 2.505  1.544  -2.479 H29 YH8 77 
YH8 H30 H30 H 0 1 N N N N N N -29.734 2.416  26.251 3.808  -3.673 -3.456 H30 YH8 78 
YH8 H31 H31 H 0 1 N N N N N N -30.134 1.394  27.672 4.733  -2.158 -3.592 H31 YH8 79 
YH8 H32 H32 H 0 1 N N N N N N -29.439 0.645  26.194 5.588  -3.716 -3.482 H32 YH8 80 
YH8 H33 H33 H 0 1 N N N N N N -19.946 -4.488 27.471 -8.910 -2.243 -1.185 H33 YH8 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
YH8 C1  C2  SING N N 1  
YH8 C1  O6  SING N N 2  
YH8 C2  C3  DOUB N N 3  
YH8 C37 N10 SING N N 4  
YH8 C37 C35 SING N N 5  
YH8 O6  C5  SING N N 6  
YH8 N15 C9  DOUB Y N 7  
YH8 N15 C7  SING Y N 8  
YH8 N10 C9  SING N N 9  
YH8 N10 C11 SING N N 10 
YH8 C3  C7  SING N N 11 
YH8 C3  C4  SING N N 12 
YH8 C16 C11 SING N N 13 
YH8 C16 C48 SING N N 14 
YH8 N34 C35 SING N N 15 
YH8 N34 C29 SING N N 16 
YH8 C9  N8  SING Y N 17 
YH8 C7  N14 DOUB Y N 18 
YH8 C11 C12 DOUB N N 19 
YH8 C28 C29 DOUB Y N 20 
YH8 C28 C27 SING Y N 21 
YH8 C35 O36 DOUB N N 22 
YH8 C23 C22 SING N N 23 
YH8 C23 N17 SING N N 24 
YH8 C5  C4  SING N N 25 
YH8 C43 C44 DOUB Y N 26 
YH8 C43 N42 SING Y N 27 
YH8 N8  N14 SING Y N 28 
YH8 N8  C13 SING N N 29 
YH8 C44 C45 SING Y N 30 
YH8 C22 N21 SING N N 31 
YH8 C29 C24 SING Y N 32 
YH8 C12 C13 SING N N 33 
YH8 C12 N17 SING N N 34 
YH8 C27 C26 DOUB Y N 35 
YH8 C13 O18 DOUB N N 36 
YH8 N42 C41 DOUB Y N 37 
YH8 N17 C19 SING N N 38 
YH8 C45 C46 DOUB Y N 39 
YH8 C41 C46 SING Y N 40 
YH8 C41 C39 SING N N 41 
YH8 C24 C38 SING N N 42 
YH8 C24 C25 DOUB Y N 43 
YH8 C46 O47 SING N N 44 
YH8 N21 C39 SING N N 45 
YH8 N21 C20 SING N N 46 
YH8 C26 C25 SING Y N 47 
YH8 C26 C30 SING N N 48 
YH8 F33 C30 SING N N 49 
YH8 C19 C20 SING N N 50 
YH8 C39 O40 DOUB N N 51 
YH8 C30 F31 SING N N 52 
YH8 C30 F32 SING N N 53 
YH8 C1  H1  SING N N 54 
YH8 C1  H2  SING N N 55 
YH8 C2  H3  SING N N 56 
YH8 C43 H4  SING N N 57 
YH8 C44 H5  SING N N 58 
YH8 C45 H6  SING N N 59 
YH8 C48 H7  SING N N 60 
YH8 C48 H8  SING N N 61 
YH8 C48 H9  SING N N 62 
YH8 C16 H10 SING N N 63 
YH8 C16 H11 SING N N 64 
YH8 C19 H12 SING N N 65 
YH8 C19 H13 SING N N 66 
YH8 C20 H14 SING N N 67 
YH8 C20 H15 SING N N 68 
YH8 C22 H16 SING N N 69 
YH8 C22 H17 SING N N 70 
YH8 C23 H18 SING N N 71 
YH8 C23 H19 SING N N 72 
YH8 C25 H20 SING N N 73 
YH8 C27 H21 SING N N 74 
YH8 C28 H22 SING N N 75 
YH8 C4  H23 SING N N 76 
YH8 C4  H24 SING N N 77 
YH8 C5  H25 SING N N 78 
YH8 C5  H26 SING N N 79 
YH8 N34 H27 SING N N 80 
YH8 C37 H28 SING N N 81 
YH8 C37 H29 SING N N 82 
YH8 C38 H30 SING N N 83 
YH8 C38 H31 SING N N 84 
YH8 C38 H32 SING N N 85 
YH8 O47 H33 SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
YH8 InChI            InChI                1.06  "InChI=1S/C32H33F3N8O5/c1-3-23-27(40-11-13-41(14-12-40)29(46)26-24(44)5-4-10-36-26)30(47)43-31(38-28(39-43)20-8-15-48-16-9-20)42(23)18-25(45)37-22-7-6-21(17-19(22)2)32(33,34)35/h4-8,10,17,44H,3,9,11-16,18H2,1-2H3,(H,37,45)" 
YH8 InChIKey         InChI                1.06  FLRLAYBOOSONEK-UHFFFAOYSA-N                                                                                                                                                                                                     
YH8 SMILES_CANONICAL CACTVS               3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncccc3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5C)C(F)(F)F)C6=CCOCC6"                                                                                                                                           
YH8 SMILES           CACTVS               3.385 "CCC1=C(N2CCN(CC2)C(=O)c3ncccc3O)C(=O)n4nc(nc4N1CC(=O)Nc5ccc(cc5C)C(F)(F)F)C6=CCOCC6"                                                                                                                                           
YH8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4C)C(F)(F)F)N5CCN(CC5)C(=O)c6c(cccn6)O"                                                                                                                                       
YH8 SMILES           "OpenEye OEToolkits" 2.0.7 "CCC1=C(C(=O)n2c(nc(n2)C3=CCOCC3)N1CC(=O)Nc4ccc(cc4C)C(F)(F)F)N5CCN(CC5)C(=O)c6c(cccn6)O"                                                                                                                                       
# 
_pdbx_chem_comp_identifier.comp_id           YH8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "2-[2-(3,6-dihydro-2~{H}-pyran-4-yl)-5-ethyl-7-oxidanylidene-6-[4-(3-oxidanylpyridin-2-yl)carbonylpiperazin-1-yl]-[1,2,4]triazolo[1,5-a]pyrimidin-4-yl]-~{N}-[2-methyl-4-(trifluoromethyl)phenyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
YH8 "Create component" 2023-06-16 PDBE 
YH8 "Initial release"  2024-04-24 RCSB 
# 
