data_Y88
# 
_chem_comp.id                                    Y88 
_chem_comp.name                                  "6-[4-({4-[(2R)-1,1,1-trifluoropropan-2-yl]phenyl}acetyl)piperazin-1-yl]pyridazine-3-carbonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H20 F3 N5 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-01 
_chem_comp.pdbx_modified_date                    2023-03-24 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        403.401 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y88 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UE5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y88 C01 C1  C 0 1 N N N -28.451 18.972 -17.173 -7.183 0.642  0.036  C01 Y88 1  
Y88 C02 C2  C 0 1 N N R -28.428 20.503 -17.188 -6.199 0.344  -1.096 C02 Y88 2  
Y88 C03 C3  C 0 1 N N N -29.831 21.092 -17.037 -6.560 -0.993 -1.746 C03 Y88 3  
Y88 C04 C4  C 0 1 Y N N -27.697 21.042 -18.425 -4.800 0.270  -0.539 C04 Y88 4  
Y88 C05 C5  C 0 1 Y N N -28.228 20.892 -19.697 -4.489 -0.670 0.425  C05 Y88 5  
Y88 C06 C6  C 0 1 Y N N -27.544 21.389 -20.796 -3.205 -0.742 0.932  C06 Y88 6  
Y88 C07 C7  C 0 1 Y N N -26.325 22.028 -20.618 -2.232 0.128  0.475  C07 Y88 7  
Y88 C08 C8  C 0 1 N N N -25.562 22.588 -21.805 -0.832 0.050  1.028  C08 Y88 8  
Y88 C09 C9  C 0 1 N N N -26.232 23.856 -22.315 -0.015 -0.903 0.195  C09 Y88 9  
Y88 C11 C10 C 0 1 N N N -26.571 25.438 -24.156 2.092  -2.059 -0.295 C11 Y88 10 
Y88 C12 C11 C 0 1 N N N -25.631 26.293 -24.975 3.389  -1.347 -0.692 C12 Y88 11 
Y88 C14 C12 C 0 1 Y N N -24.451 26.058 -27.190 5.301  -0.315 0.214  C14 Y88 12 
Y88 C17 C13 C 0 1 Y N N -23.653 27.277 -29.444 7.714  0.760  -0.326 C17 Y88 13 
Y88 C18 C14 C 0 1 N N N -23.232 28.015 -30.704 8.980  1.374  -0.592 C18 Y88 14 
Y88 C20 C15 C 0 1 Y N N -23.350 25.926 -29.288 7.486  -0.571 -0.700 C20 Y88 15 
Y88 C21 C16 C 0 1 Y N N -23.763 25.268 -28.104 6.247  -1.120 -0.422 C21 Y88 16 
Y88 C22 C17 C 0 1 N N N -24.158 24.371 -25.320 3.213  0.188  1.177  C22 Y88 17 
Y88 C23 C18 C 0 1 N N N -25.099 23.529 -24.482 1.908  -0.461 1.651  C23 Y88 18 
Y88 C25 C19 C 0 1 Y N N -25.797 22.188 -19.352 -2.543 1.067  -0.490 C25 Y88 19 
Y88 C26 C20 C 0 1 Y N N -26.482 21.689 -18.261 -3.827 1.139  -0.996 C26 Y88 20 
Y88 F21 F1  F 0 1 N N N -27.178 18.498 -17.254 -8.481 0.711  -0.481 F21 Y88 21 
Y88 F22 F2  F 0 1 N N N -29.017 18.515 -16.026 -7.116 -0.375 0.994  F22 Y88 22 
Y88 F23 F3  F 0 1 N N N -29.189 18.492 -18.213 -6.853 1.865  0.631  F23 Y88 23 
Y88 N10 N1  N 0 1 N N N -25.966 24.272 -23.653 1.276  -1.132 0.505  N10 Y88 24 
Y88 N13 N2  N 0 1 N N N -24.916 25.463 -25.978 4.046  -0.823 0.513  N13 Y88 25 
Y88 N15 N3  N 0 1 Y N N -24.708 27.321 -27.398 5.605  0.936  0.538  N15 Y88 26 
Y88 N16 N4  N 0 1 Y N N -24.312 27.916 -28.518 6.754  1.449  0.281  N16 Y88 27 
Y88 N19 N5  N 0 1 N N N -22.906 28.547 -31.642 9.984  1.861  -0.803 N19 Y88 28 
Y88 O24 O1  O 0 1 N N N -26.966 24.508 -21.656 -0.520 -1.465 -0.754 O24 Y88 29 
Y88 H1  H1  H 0 1 N N N -27.849 20.824 -16.309 -6.251 1.136  -1.842 H1  Y88 30 
Y88 H2  H2  H 0 1 N N N -30.310 20.675 -16.139 -5.858 -1.206 -2.553 H2  Y88 31 
Y88 H3  H3  H 0 1 N N N -29.761 22.186 -16.941 -6.507 -1.786 -1.000 H3  Y88 32 
Y88 H4  H4  H 0 1 N N N -30.432 20.840 -17.923 -7.571 -0.940 -2.149 H4  Y88 33 
Y88 H5  H5  H 0 1 N N N -29.174 20.388 -19.832 -5.249 -1.350 0.782  H5  Y88 34 
Y88 H6  H6  H 0 1 N N N -27.959 21.279 -21.787 -2.962 -1.476 1.686  H6  Y88 35 
Y88 H7  H7  H 0 1 N N N -25.543 21.839 -22.610 -0.376 1.040  1.001  H7  Y88 36 
Y88 H8  H8  H 0 1 N N N -24.532 22.821 -21.497 -0.868 -0.305 2.058  H8  Y88 37 
Y88 H9  H9  H 0 1 N N N -26.937 26.035 -23.308 1.544  -2.348 -1.192 H9  Y88 38 
Y88 H10 H10 H 0 1 N N N -27.420 25.145 -24.791 2.323  -2.945 0.295  H10 Y88 39 
Y88 H11 H11 H 0 1 N N N -24.897 26.766 -24.307 4.054  -2.052 -1.191 H11 Y88 40 
Y88 H12 H12 H 0 1 N N N -26.209 27.071 -25.495 3.160  -0.523 -1.369 H12 Y88 41 
Y88 H13 H13 H 0 1 N N N -22.810 25.391 -30.055 8.252  -1.149 -1.195 H13 Y88 42 
Y88 H14 H14 H 0 1 N N N -23.557 24.223 -27.923 6.020  -2.141 -0.688 H14 Y88 43 
Y88 H15 H15 H 0 1 N N N -23.687 23.739 -26.087 2.986  0.990  0.475  H15 Y88 44 
Y88 H16 H16 H 0 1 N N N -23.380 24.804 -24.673 3.749  0.595  2.034  H16 Y88 45 
Y88 H17 H17 H 0 1 N N N -25.712 22.919 -25.162 2.125  -1.193 2.429  H17 Y88 46 
Y88 H18 H18 H 0 1 N N N -24.493 22.870 -23.843 1.238  0.305  2.041  H18 Y88 47 
Y88 H19 H19 H 0 1 N N N -24.856 22.699 -19.216 -1.783 1.746  -0.848 H19 Y88 48 
Y88 H20 H20 H 0 1 N N N -26.067 21.804 -17.271 -4.069 1.871  -1.753 H20 Y88 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y88 N19 C18 TRIP N N 1  
Y88 C18 C17 SING N N 2  
Y88 C17 C20 DOUB Y N 3  
Y88 C17 N16 SING Y N 4  
Y88 C20 C21 SING Y N 5  
Y88 N16 N15 DOUB Y N 6  
Y88 C21 C14 DOUB Y N 7  
Y88 N15 C14 SING Y N 8  
Y88 C14 N13 SING N N 9  
Y88 N13 C22 SING N N 10 
Y88 N13 C12 SING N N 11 
Y88 C22 C23 SING N N 12 
Y88 C12 C11 SING N N 13 
Y88 C23 N10 SING N N 14 
Y88 C11 N10 SING N N 15 
Y88 N10 C09 SING N N 16 
Y88 C09 C08 SING N N 17 
Y88 C09 O24 DOUB N N 18 
Y88 C08 C07 SING N N 19 
Y88 C06 C07 DOUB Y N 20 
Y88 C06 C05 SING Y N 21 
Y88 C07 C25 SING Y N 22 
Y88 C05 C04 DOUB Y N 23 
Y88 C25 C26 DOUB Y N 24 
Y88 C04 C26 SING Y N 25 
Y88 C04 C02 SING N N 26 
Y88 F23 C01 SING N N 27 
Y88 F21 C01 SING N N 28 
Y88 C02 C01 SING N N 29 
Y88 C02 C03 SING N N 30 
Y88 C01 F22 SING N N 31 
Y88 C02 H1  SING N N 32 
Y88 C03 H2  SING N N 33 
Y88 C03 H3  SING N N 34 
Y88 C03 H4  SING N N 35 
Y88 C05 H5  SING N N 36 
Y88 C06 H6  SING N N 37 
Y88 C08 H7  SING N N 38 
Y88 C08 H8  SING N N 39 
Y88 C11 H9  SING N N 40 
Y88 C11 H10 SING N N 41 
Y88 C12 H11 SING N N 42 
Y88 C12 H12 SING N N 43 
Y88 C20 H13 SING N N 44 
Y88 C21 H14 SING N N 45 
Y88 C22 H15 SING N N 46 
Y88 C22 H16 SING N N 47 
Y88 C23 H17 SING N N 48 
Y88 C23 H18 SING N N 49 
Y88 C25 H19 SING N N 50 
Y88 C26 H20 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y88 SMILES           ACDLabs              12.01 "O=C(Cc1ccc(cc1)C(C)C(F)(F)F)N1CCN(CC1)c1ccc(C#N)nn1"                                                                                         
Y88 InChI            InChI                1.03  "InChI=1S/C20H20F3N5O/c1-14(20(21,22)23)16-4-2-15(3-5-16)12-19(29)28-10-8-27(9-11-28)18-7-6-17(13-24)25-26-18/h2-7,14H,8-12H2,1H3/t14-/m1/s1" 
Y88 InChIKey         InChI                1.03  VYMLCXOMLAPNOR-CQSZACIVSA-N                                                                                                                   
Y88 SMILES_CANONICAL CACTVS               3.385 "C[C@H](c1ccc(CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)cc1)C(F)(F)F"                                                                                     
Y88 SMILES           CACTVS               3.385 "C[CH](c1ccc(CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)cc1)C(F)(F)F"                                                                                      
Y88 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H](c1ccc(cc1)CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)C(F)(F)F"                                                                                     
Y88 SMILES           "OpenEye OEToolkits" 2.0.7 "CC(c1ccc(cc1)CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)C(F)(F)F"                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y88 "SYSTEMATIC NAME" ACDLabs              12.01 "6-[4-({4-[(2R)-1,1,1-trifluoropropan-2-yl]phenyl}acetyl)piperazin-1-yl]pyridazine-3-carbonitrile"              
Y88 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[4-[2-[4-[(2~{R})-1,1,1-tris(fluoranyl)propan-2-yl]phenyl]ethanoyl]piperazin-1-yl]pyridazine-3-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y88 "Create component" 2022-04-01 RCSB 
Y88 "Initial release"  2023-03-29 RCSB 
# 
