data_XR8
#

_chem_comp.id                                   XR8
_chem_comp.name                                 "5-[(azetidin-3-yl)amino]-2-methyl-N-[(1R)-1-(3-{5-[(pyrrolidin-1-yl)methyl]thiophen-2-yl}phenyl)ethyl]benzamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H34 N4 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-12
_chem_comp.pdbx_modified_date                   2021-02-19
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       474.661
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XR8
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LBS
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XR8  C01  C1   C  0  1  N  N  N  11.788  -12.142  29.673    0.587   1.357   2.644  C01  XR8   1  
XR8  C02  C2   C  0  1  N  N  R  11.300  -11.895  31.097    0.607   0.965   1.165  C02  XR8   2  
XR8  N03  N1   N  0  1  N  N  N  10.718  -10.561  31.235    1.992   0.770   0.730  N03  XR8   3  
XR8  C04  C3   C  0  1  N  N  N  10.520   -9.896  32.566    2.727   1.826   0.327  C04  XR8   4  
XR8  C05  C4   C  0  1  Y  N  N   9.912   -8.420  32.751    4.125   1.629  -0.112  C05  XR8   5  
XR8  C06  C5   C  0  1  Y  N  N  10.901   -7.428  32.879    4.848   2.697  -0.648  C06  XR8   6  
XR8  C07  C6   C  0  1  N  N  N  12.419   -7.789  32.790    4.203   4.052  -0.779  C07  XR8   7  
XR8  C08  C7   C  0  1  Y  N  N  10.577   -6.136  33.072    6.152   2.510  -1.057  C08  XR8   8  
XR8  C09  C8   C  0  1  Y  N  N   9.279   -5.754  33.148    6.748   1.268  -0.939  C09  XR8   9  
XR8  C10  C9   C  0  1  Y  N  N   8.235   -6.675  33.020    6.037   0.199  -0.408  C10  XR8  10  
XR8  N11  N2   N  0  1  N  N  N   6.879   -6.006  33.180    6.644  -1.054  -0.291  N11  XR8  11  
XR8  C12  C10  C  0  1  N  N  N   5.615   -6.347  32.588    8.029  -1.241  -0.729  C12  XR8  12  
XR8  C13  C11  C  0  1  N  N  N   5.601   -6.680  31.155    8.379  -2.700  -1.071  C13  XR8  13  
XR8  N14  N3   N  0  1  N  N  N   4.962   -5.362  30.939    8.783  -2.832   0.346  N14  XR8  14  
XR8  C15  C12  C  0  1  N  N  N   4.844   -5.092  32.369    9.033  -1.373   0.431  C15  XR8  15  
XR8  C16  C13  C  0  1  Y  N  N   8.565   -8.030  32.832    4.727   0.377   0.012  C16  XR8  16  
XR8  O17  O1   O  0  1  N  N  N  10.924  -10.450  33.553    2.240   2.940   0.324  O17  XR8  17  
XR8  C18  C14  C  0  1  Y  N  N  10.209  -12.895  31.572   -0.165  -0.315   0.975  C18  XR8  18  
XR8  C19  C15  C  0  1  Y  N  N  10.521  -13.798  32.594   -1.462  -0.274   0.507  C19  XR8  19  
XR8  C20  C16  C  0  1  Y  N  N   9.539  -14.622  33.098   -2.175  -1.461   0.330  C20  XR8  20  
XR8  C21  C17  C  0  1  Y  N  N   9.860  -15.647  34.218   -3.565  -1.424  -0.171  C21  XR8  21  
XR8  C22  C18  C  0  1  Y  N  N   8.992  -16.255  35.177   -4.348  -2.502  -0.374  C22  XR8  22  
XR8  C23  C19  C  0  1  Y  N  N   9.808  -17.264  36.049   -5.612  -2.216  -0.847  C23  XR8  23  
XR8  C24  C20  C  0  1  Y  N  N  11.181  -17.280  35.626   -5.867  -0.918  -1.032  C24  XR8  24  
XR8  C25  C21  C  0  1  N  N  N  12.362  -18.168  36.160   -7.169  -0.353  -1.539  C25  XR8  25  
XR8  N26  N4   N  0  1  N  N  N  12.629  -18.992  35.300   -8.058  -0.077  -0.403  N26  XR8  26  
XR8  C27  C22  C  0  1  N  N  N  13.800  -18.625  34.254   -7.593   1.110   0.360  C27  XR8  27  
XR8  C28  C23  C  0  1  N  N  N  14.320  -19.756  33.781   -8.861   1.555   1.131  C28  XR8  28  
XR8  C29  C24  C  0  1  N  N  N  13.702  -20.875  34.541   -9.995   1.294   0.113  C29  XR8  29  
XR8  C30  C25  C  0  1  N  N  N  12.840  -20.211  35.672   -9.424   0.251  -0.866  C30  XR8  30  
XR8  S31  S1   S  0  1  Y  N  N  11.381  -16.195  34.404   -4.456   0.034  -0.588  S31  XR8  31  
XR8  C32  C26  C  0  1  Y  N  N   8.255  -14.614  32.522   -1.569  -2.682   0.629  C32  XR8  32  
XR8  C33  C27  C  0  1  Y  N  N   7.943  -13.704  31.516   -0.271  -2.710   1.096  C33  XR8  33  
XR8  C34  C28  C  0  1  Y  N  N   8.915  -12.840  31.037    0.431  -1.530   1.264  C34  XR8  34  
XR8  H1   H1   H  0  1  N  N  N  12.219  -13.152  29.603    1.145   2.283   2.782  H1   XR8  35  
XR8  H2   H2   H  0  1  N  N  N  10.942  -12.055  28.975   -0.443   1.502   2.968  H2   XR8  36  
XR8  H3   H3   H  0  1  N  N  N  12.555  -11.397  29.414    1.046   0.565   3.236  H3   XR8  37  
XR8  H4   H4   H  0  1  N  N  N  12.160  -11.984  31.777    0.148   1.758   0.573  H4   XR8  38  
XR8  H5   H5   H  0  1  N  N  N  10.440  -10.071  30.408    2.380  -0.119   0.732  H5   XR8  39  
XR8  H6   H6   H  0  1  N  N  N  12.751   -7.723  31.744    4.276   4.583   0.171  H6   XR8  40  
XR8  H7   H7   H  0  1  N  N  N  13.000   -7.085  33.404    4.713   4.624  -1.554  H7   XR8  41  
XR8  H8   H8   H  0  1  N  N  N  12.575   -8.813  33.160    3.154   3.931  -1.048  H8   XR8  42  
XR8  H9   H9   H  0  1  N  N  N  11.359   -5.397  33.167    6.710   3.338  -1.471  H9   XR8  43  
XR8  H10  H10  H  0  1  N  N  N   9.045   -4.712  33.311    7.770   1.129  -1.261  H10  XR8  44  
XR8  H11  H11  H  0  1  N  N  N   7.036   -5.060  32.896    6.147  -1.801   0.080  H11  XR8  45  
XR8  H12  H12  H  0  1  N  N  N   5.049   -7.075  33.188    8.334  -0.526  -1.493  H12  XR8  46  
XR8  H13  H13  H  0  1  N  N  N   4.976   -7.545  30.888    7.515  -3.308  -1.340  H13  XR8  47  
XR8  H14  H14  H  0  1  N  N  N   6.595   -6.791  30.698    9.205  -2.800  -1.776  H14  XR8  48  
XR8  H15  H15  H  0  1  N  N  N   5.550   -4.710  30.460    7.999  -3.099   0.922  H15  XR8  49  
XR8  H17  H17  H  0  1  N  N  N   5.349   -4.176  32.708   10.051  -1.085   0.167  H17  XR8  50  
XR8  H18  H18  H  0  1  N  N  N   3.815   -5.109  32.758    8.690  -0.923   1.363  H18  XR8  51  
XR8  H19  H19  H  0  1  N  N  N   7.783   -8.770  32.750    4.175  -0.451   0.429  H19  XR8  52  
XR8  H20  H20  H  0  1  N  N  N  11.526  -13.849  32.986   -1.924   0.675   0.278  H20  XR8  53  
XR8  H21  H21  H  0  1  N  N  N   7.937  -16.049  35.283   -4.012  -3.511  -0.182  H21  XR8  54  
XR8  H22  H22  H  0  1  N  N  N   9.400  -17.861  36.851   -6.341  -2.986  -1.054  H22  XR8  55  
XR8  H23  H23  H  0  1  N  N  N  12.057  -18.679  37.085   -6.977   0.571  -2.083  H23  XR8  56  
XR8  H24  H24  H  0  1  N  N  N  13.242  -17.539  36.361   -7.643  -1.075  -2.204  H24  XR8  57  
XR8  H26  H26  H  0  1  N  N  N  14.582  -18.043  34.763   -6.798   0.835   1.053  H26  XR8  58  
XR8  H27  H27  H  0  1  N  N  N  13.384  -18.034  33.425   -7.257   1.895  -0.317  H27  XR8  59  
XR8  H28  H28  H  0  1  N  N  N  14.092  -19.857  32.710   -9.000   0.949   2.027  H28  XR8  60  
XR8  H29  H29  H  0  1  N  N  N  15.410  -19.759  33.926   -8.807   2.613   1.385  H29  XR8  61  
XR8  H30  H30  H  0  1  N  N  N  13.063  -21.479  33.879  -10.874   0.895   0.619  H30  XR8  62  
XR8  H31  H31  H  0  1  N  N  N  14.482  -21.514  34.981  -10.246   2.212  -0.417  H31  XR8  63  
XR8  H32  H32  H  0  1  N  N  N  11.885  -20.745  35.786   -9.384   0.669  -1.872  H32  XR8  64  
XR8  H33  H33  H  0  1  N  N  N  13.386  -20.229  36.627  -10.044  -0.645  -0.857  H33  XR8  65  
XR8  H34  H34  H  0  1  N  N  N   7.509  -15.317  32.862   -2.116  -3.604   0.495  H34  XR8  66  
XR8  H35  H35  H  0  1  N  N  N   6.943  -13.671  31.109    0.198  -3.654   1.328  H35  XR8  67  
XR8  H36  H36  H  0  1  N  N  N   8.677  -12.131  30.258    1.447  -1.557   1.630  H36  XR8  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XR8  C01  C02  SING  N  N   1  
XR8  N14  C13  SING  N  N   2  
XR8  N14  C15  SING  N  N   3  
XR8  C34  C33  DOUB  Y  N   4  
XR8  C34  C18  SING  Y  N   5  
XR8  C02  N03  SING  N  N   6  
XR8  C02  C18  SING  N  N   7  
XR8  C13  C12  SING  N  N   8  
XR8  N03  C04  SING  N  N   9  
XR8  C33  C32  SING  Y  N  10  
XR8  C18  C19  DOUB  Y  N  11  
XR8  C15  C12  SING  N  N  12  
XR8  C32  C20  DOUB  Y  N  13  
XR8  C04  C05  SING  N  N  14  
XR8  C04  O17  DOUB  N  N  15  
XR8  C12  N11  SING  N  N  16  
XR8  C19  C20  SING  Y  N  17  
XR8  C05  C16  DOUB  Y  N  18  
XR8  C05  C06  SING  Y  N  19  
XR8  C07  C06  SING  N  N  20  
XR8  C16  C10  SING  Y  N  21  
XR8  C06  C08  DOUB  Y  N  22  
XR8  C10  C09  DOUB  Y  N  23  
XR8  C10  N11  SING  N  N  24  
XR8  C08  C09  SING  Y  N  25  
XR8  C20  C21  SING  N  N  26  
XR8  C28  C27  SING  N  N  27  
XR8  C28  C29  SING  N  N  28  
XR8  C21  S31  SING  Y  N  29  
XR8  C21  C22  DOUB  Y  N  30  
XR8  C27  N26  SING  N  N  31  
XR8  S31  C24  SING  Y  N  32  
XR8  C29  C30  SING  N  N  33  
XR8  C22  C23  SING  Y  N  34  
XR8  N26  C30  SING  N  N  35  
XR8  N26  C25  SING  N  N  36  
XR8  C24  C23  DOUB  Y  N  37  
XR8  C24  C25  SING  N  N  38  
XR8  C01  H1   SING  N  N  39  
XR8  C01  H2   SING  N  N  40  
XR8  C01  H3   SING  N  N  41  
XR8  C02  H4   SING  N  N  42  
XR8  N03  H5   SING  N  N  43  
XR8  C07  H6   SING  N  N  44  
XR8  C07  H7   SING  N  N  45  
XR8  C07  H8   SING  N  N  46  
XR8  C08  H9   SING  N  N  47  
XR8  C09  H10  SING  N  N  48  
XR8  N11  H11  SING  N  N  49  
XR8  C12  H12  SING  N  N  50  
XR8  C13  H13  SING  N  N  51  
XR8  C13  H14  SING  N  N  52  
XR8  N14  H15  SING  N  N  53  
XR8  C15  H17  SING  N  N  54  
XR8  C15  H18  SING  N  N  55  
XR8  C16  H19  SING  N  N  56  
XR8  C19  H20  SING  N  N  57  
XR8  C22  H21  SING  N  N  58  
XR8  C23  H22  SING  N  N  59  
XR8  C25  H23  SING  N  N  60  
XR8  C25  H24  SING  N  N  61  
XR8  C27  H26  SING  N  N  62  
XR8  C27  H27  SING  N  N  63  
XR8  C28  H28  SING  N  N  64  
XR8  C28  H29  SING  N  N  65  
XR8  C29  H30  SING  N  N  66  
XR8  C29  H31  SING  N  N  67  
XR8  C30  H32  SING  N  N  68  
XR8  C30  H33  SING  N  N  69  
XR8  C32  H34  SING  N  N  70  
XR8  C33  H35  SING  N  N  71  
XR8  C34  H36  SING  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XR8  SMILES            ACDLabs               12.01  "CC(NC(c1cc(ccc1C)NC2CNC2)=O)c5cc(c3sc(cc3)CN4CCCC4)ccc5"  
XR8  InChI             InChI                 1.03   "InChI=1S/C28H34N4OS/c1-19-8-9-23(31-24-16-29-17-24)15-26(19)28(33)30-20(2)21-6-5-7-22(14-21)27-11-10-25(34-27)18-32-12-3-4-13-32/h5-11,14-15,20,24,29,31H,3-4,12-13,16-18H2,1-2H3,(H,30,33)/t20-/m1/s1"  
XR8  InChIKey          InChI                 1.03   ZTKSBNLNPMUGBL-HXUWFJFHSA-N  
XR8  SMILES_CANONICAL  CACTVS                3.385  "C[C@@H](NC(=O)c1cc(NC2CNC2)ccc1C)c3cccc(c3)c4sc(CN5CCCC5)cc4"  
XR8  SMILES            CACTVS                3.385  "C[CH](NC(=O)c1cc(NC2CNC2)ccc1C)c3cccc(c3)c4sc(CN5CCCC5)cc4"  
XR8  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)N[C@H](C)c2cccc(c2)c3ccc(s3)CN4CCCC4)NC5CNC5"  
XR8  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ccc(cc1C(=O)NC(C)c2cccc(c2)c3ccc(s3)CN4CCCC4)NC5CNC5"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XR8  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-[(azetidin-3-yl)amino]-2-methyl-N-[(1R)-1-(3-{5-[(pyrrolidin-1-yl)methyl]thiophen-2-yl}phenyl)ethyl]benzamide"  
XR8  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-(azetidin-3-ylamino)-2-methyl-~{N}-[(1~{R})-1-[3-[5-(pyrrolidin-1-ylmethyl)thiophen-2-yl]phenyl]ethyl]benzamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XR8  "Create component"  2021-01-12  RCSB  
XR8  "Initial release"   2021-02-24  RCSB  
##
