data_X88
# 
_chem_comp.id                                    X88 
_chem_comp.name                                  "5-nitro-2-[(pyrazin-2-ylmethyl)amino]benzamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H11 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2011-03-23 
_chem_comp.pdbx_modified_date                    2012-08-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        273.247 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     X88 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3R7E 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
X88 C1   C1   C 0  1 Y N N 65.423 45.170 -46.367 -1.003 -1.511 -0.024 C1   X88 1  
X88 C2   C2   C 0  1 Y N N 66.709 44.735 -45.959 -2.373 -1.670 -0.033 C2   X88 2  
X88 C3   C3   C 0  1 Y N N 67.845 44.832 -46.828 -3.208 -0.563 -0.005 C3   X88 3  
X88 C4   C4   C 0  1 Y N N 67.631 45.397 -48.141 -2.679 0.708  0.031  C4   X88 4  
X88 C5   C5   C 0  1 Y N N 66.332 45.859 -48.608 -1.293 0.885  0.041  C5   X88 5  
X88 C6   C6   C 0  1 Y N N 65.176 45.739 -47.688 -0.450 -0.236 0.013  C6   X88 6  
X88 N7   N7   N 0  1 N N N 63.953 46.130 -48.073 0.929  -0.074 0.022  N7   X88 7  
X88 C8   C8   C 0  1 N N N 66.231 46.357 -49.915 -0.719 2.243  0.079  C8   X88 8  
X88 N9   N9   N 0  1 N N N 67.076 45.977 -50.924 -1.526 3.318  -0.015 N9   X88 9  
X88 O10  O10  O 0  1 N N N 65.263 47.234 -50.242 0.482  2.393  0.195  O10  X88 10 
X88 N11  N11  N 1  1 N N N 69.072 44.409 -46.437 -4.677 -0.749 -0.016 N11  X88 11 
X88 O12  O12  O -1 1 N N N 70.145 44.493 -47.250 -5.148 -1.872 -0.048 O12  X88 12 
X88 O13  O13  O 0  1 N N N 69.260 43.932 -45.331 -5.413 0.220  0.008  O13  X88 13 
X88 C14  C14  C 0  1 N N N 62.699 46.064 -47.288 1.805  -1.238 -0.130 C14  X88 14 
X88 C15  C15  C 0  1 Y N N 61.982 49.453 -44.671 5.800  -0.016 0.044  C15  X88 15 
X88 N16  N16  N 0  1 Y N N 62.868 49.562 -45.724 5.207  -0.446 1.144  N16  X88 16 
X88 C17  C17  C 0  1 Y N N 63.133 48.519 -46.587 3.945  -0.836 1.106  C17  X88 17 
X88 C18  C18  C 0  1 Y N N 62.468 47.273 -46.386 3.244  -0.794 -0.086 C18  X88 18 
X88 N19  N19  N 0  1 Y N N 61.576 47.174 -45.321 3.837  -0.364 -1.186 N19  X88 19 
X88 C20  C20  C 0  1 Y N N 61.317 48.226 -44.462 5.099  0.026  -1.148 C20  X88 20 
X88 H1   H1   H 0  1 N N N 64.598 45.077 -45.677 -0.359 -2.378 -0.041 H1   X88 21 
X88 H2   H2   H 0  1 N N N 66.836 44.321 -44.970 -2.798 -2.662 -0.062 H2   X88 22 
X88 H4   H4   H 0  1 N N N 68.476 45.480 -48.808 -3.334 1.566  0.051  H4   X88 23 
X88 HN7  HN7  H 0  1 N N N 64.063 47.105 -48.268 1.312  0.811  0.129  HN7  X88 24 
X88 HN9  HN9  H 0  1 N N N 66.955 46.349 -51.844 -2.485 3.199  -0.108 HN9  X88 25 
X88 HN9A HN9A H 0  0 N N N 67.814 45.328 -50.740 -1.149 4.212  0.010  HN9A X88 26 
X88 H14  H14  H 0  1 N N N 61.858 46.002 -47.995 1.617  -1.942 0.681  H14  X88 27 
X88 H14A H14A H 0  0 N N N 62.743 45.168 -46.651 1.603  -1.723 -1.086 H14A X88 28 
X88 H15  H15  H 0  1 N N N 61.801 50.293 -44.017 6.830  0.306  0.077  H15  X88 29 
X88 H17  H17  H 0  1 N N N 63.832 48.644 -47.401 3.461  -1.187 2.005  H17  X88 30 
X88 H20  H20  H 0  1 N N N 60.619 48.111 -43.646 5.583  0.377  -2.047 H20  X88 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
X88 C1  C2   DOUB Y N 1  
X88 C1  C6   SING Y N 2  
X88 C1  H1   SING N N 3  
X88 C2  C3   SING Y N 4  
X88 C2  H2   SING N N 5  
X88 C3  C4   DOUB Y N 6  
X88 C3  N11  SING N N 7  
X88 C4  C5   SING Y N 8  
X88 C4  H4   SING N N 9  
X88 C5  C6   DOUB Y N 10 
X88 C5  C8   SING N N 11 
X88 C6  N7   SING N N 12 
X88 N7  C14  SING N N 13 
X88 N7  HN7  SING N N 14 
X88 C8  N9   SING N N 15 
X88 C8  O10  DOUB N N 16 
X88 N9  HN9  SING N N 17 
X88 N9  HN9A SING N N 18 
X88 N11 O12  SING N N 19 
X88 N11 O13  DOUB N N 20 
X88 C14 C18  SING N N 21 
X88 C14 H14  SING N N 22 
X88 C14 H14A SING N N 23 
X88 C15 N16  DOUB Y N 24 
X88 C15 C20  SING Y N 25 
X88 C15 H15  SING N N 26 
X88 N16 C17  SING Y N 27 
X88 C17 C18  DOUB Y N 28 
X88 C17 H17  SING N N 29 
X88 C18 N19  SING Y N 30 
X88 N19 C20  DOUB Y N 31 
X88 C20 H20  SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
X88 SMILES           ACDLabs              12.01 "[O-][N+](=O)c2ccc(NCc1nccnc1)c(C(=O)N)c2"                                                             
X88 SMILES_CANONICAL CACTVS               3.370 "NC(=O)c1cc(ccc1NCc2cnccn2)[N+]([O-])=O"                                                               
X88 SMILES           CACTVS               3.370 "NC(=O)c1cc(ccc1NCc2cnccn2)[N+]([O-])=O"                                                               
X88 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(c(cc1[N+](=O)[O-])C(=O)N)NCc2cnccn2"                                                             
X88 SMILES           "OpenEye OEToolkits" 1.7.0 "c1cc(c(cc1[N+](=O)[O-])C(=O)N)NCc2cnccn2"                                                             
X88 InChI            InChI                1.03  "InChI=1S/C12H11N5O3/c13-12(18)10-5-9(17(19)20)1-2-11(10)16-7-8-6-14-3-4-15-8/h1-6,16H,7H2,(H2,13,18)" 
X88 InChIKey         InChI                1.03  PNGOOMNEARANOE-UHFFFAOYSA-N                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
X88 "SYSTEMATIC NAME" ACDLabs              12.01 "5-nitro-2-[(pyrazin-2-ylmethyl)amino]benzamide" 
X88 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "5-nitro-2-(pyrazin-2-ylmethylamino)benzamide"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
X88 "Create component"  2011-03-23 RCSB 
X88 "Modify descriptor" 2011-06-04 RCSB 
# 
