data_W88
# 
_chem_comp.id                                    W88 
_chem_comp.name                                  "5-[4-(6-carboxynaphthalen-2-yl)butyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H18 N2 O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-03-18 
_chem_comp.pdbx_modified_date                    2014-03-07 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        382.367 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     W88 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3W88 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
W88 OAB OAB O 0 1 N N N -7.438 18.348 -14.704 2.991  2.153  0.402  OAB W88 1  
W88 CAT CAT C 0 1 N N N -6.649 17.415 -14.656 4.191  2.158  0.217  CAT W88 2  
W88 OAF OAF O 0 1 N N N -5.367 17.551 -14.694 4.840  3.323  0.034  OAF W88 3  
W88 CAX CAX C 0 1 N N N -7.122 16.033 -14.660 4.943  0.880  0.199  CAX W88 4  
W88 NAQ NAQ N 0 1 N N N -6.491 15.168 -15.595 6.281  0.865  -0.132 NAQ W88 5  
W88 CAY CAY C 0 1 N N N -6.791 13.832 -15.663 6.979  -0.283 -0.154 CAY W88 6  
W88 OAC OAC O 0 1 N N N -6.209 13.084 -16.449 8.157  -0.252 -0.451 OAC W88 7  
W88 NAR NAR N 0 1 N N N -7.695 13.356 -14.752 6.410  -1.463 0.145  NAR W88 8  
W88 CAZ CAZ C 0 1 N N N -8.369 14.151 -13.826 5.104  -1.527 0.479  CAZ W88 9  
W88 OAD OAD O 0 1 N N N -9.155 13.595 -13.033 4.586  -2.594 0.750  OAD W88 10 
W88 CAW CAW C 0 1 N N N -8.042 15.520 -13.778 4.320  -0.286 0.514  CAW W88 11 
W88 CAP CAP C 0 1 N N N -8.717 16.336 -12.798 2.860  -0.305 0.887  CAP W88 12 
W88 CAN CAN C 0 1 N N N -8.182 16.153 -11.340 2.016  -0.534 -0.368 CAN W88 13 
W88 CAM CAM C 0 1 N N N -6.761 16.712 -11.308 0.534  -0.553 0.010  CAM W88 14 
W88 CAO CAO C 0 1 N N N -6.163 16.670 -9.873  -0.310 -0.782 -1.245 CAO W88 15 
W88 CAU CAU C 0 1 Y N N -5.302 17.773 -9.643  -1.770 -0.802 -0.872 CAU W88 16 
W88 CAK CAK C 0 1 Y N N -5.410 18.540 -8.503  -2.479 0.361  -0.880 CAK W88 17 
W88 CBA CBA C 0 1 Y N N -4.570 19.616 -8.244  -3.840 0.348  -0.533 CBA W88 18 
W88 CAJ CAJ C 0 1 Y N N -4.737 20.330 -7.061  -4.600 1.533  -0.532 CAJ W88 19 
W88 CAH CAH C 0 1 Y N N -3.932 21.405 -6.799  -5.914 1.497  -0.194 CAH W88 20 
W88 CAV CAV C 0 1 Y N N -2.929 21.742 -7.690  -6.535 0.285  0.157  CAV W88 21 
W88 CAS CAS C 0 1 N N N -2.231 22.864 -7.371  -7.966 0.274  0.521  CAS W88 22 
W88 OAE OAE O 0 1 N N N -1.520 22.902 -6.341  -8.672 1.421  0.514  OAE W88 23 
W88 OAA OAA O 0 1 N N N -2.445 23.870 -8.104  -8.507 -0.771 0.825  OAA W88 24 
W88 CAL CAL C 0 1 Y N N -2.742 21.051 -8.904  -5.814 -0.899 0.165  CAL W88 25 
W88 CBB CBB C 0 1 Y N N -3.588 19.975 -9.155  -4.455 -0.880 -0.181 CBB W88 26 
W88 CAI CAI C 0 1 Y N N -3.488 19.190 -10.273 -3.690 -2.061 -0.185 CAI W88 27 
W88 CAG CAG C 0 1 Y N N -4.314 18.097 -10.512 -2.375 -2.010 -0.531 CAG W88 28 
W88 H1  H1  H 0 1 N N N -5.148 18.473 -14.764 4.308  4.130  0.058  H1  W88 29 
W88 H2  H2  H 0 1 N N N -7.884 12.374 -14.751 6.941  -2.274 0.121  H2  W88 30 
W88 H4  H4  H 0 1 N N N -8.593 17.391 -13.082 2.678  -1.110 1.599  H4  W88 31 
W88 H5  H5  H 0 1 N N N -9.786 16.077 -12.809 2.588  0.649  1.339  H5  W88 32 
W88 H6  H6  H 0 1 N N N -8.820 16.703 -10.633 2.199  0.271  -1.080 H6  W88 33 
W88 H7  H7  H 0 1 N N N -8.174 15.086 -11.073 2.289  -1.488 -0.820 H7  W88 34 
W88 H8  H8  H 0 1 N N N -6.126 16.113 -11.977 0.352  -1.358 0.722  H8  W88 35 
W88 H9  H9  H 0 1 N N N -6.779 17.755 -11.657 0.262  0.400  0.462  H9  W88 36 
W88 H10 H10 H 0 1 N N N -6.984 16.697 -9.141  -0.127 0.023  -1.957 H10 W88 37 
W88 H11 H11 H 0 1 N N N -5.592 15.738 -9.749  -0.038 -1.736 -1.697 H11 W88 38 
W88 H12 H12 H 0 1 N N N -6.177 18.295 -7.783  -1.997 1.288  -1.150 H12 W88 39 
W88 H13 H13 H 0 1 N N N -5.498 20.037 -6.353  -4.136 2.471  -0.800 H13 W88 40 
W88 H14 H14 H 0 1 N N N -4.079 21.987 -5.901  -6.490 2.410  -0.196 H14 W88 41 
W88 H15 H15 H 0 1 N N N -1.187 23.783 -6.218  -9.606 1.364  0.760  H15 W88 42 
W88 H16 H16 H 0 1 N N N -1.977 21.343 -9.608  -6.295 -1.827 0.435  H16 W88 43 
W88 H17 H17 H 0 1 N N N -2.731 19.432 -11.004 -4.145 -3.003 0.081  H17 W88 44 
W88 H18 H18 H 0 1 N N N -4.166 17.500 -11.400 -1.790 -2.917 -0.534 H18 W88 45 
W88 H19 H19 H 0 1 N N N -5.809 15.545 -16.221 6.726  1.697  -0.354 H19 W88 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
W88 OAC CAY DOUB N N 1  
W88 CAY NAQ SING N N 2  
W88 CAY NAR SING N N 3  
W88 NAQ CAX SING N N 4  
W88 NAR CAZ SING N N 5  
W88 OAB CAT DOUB N N 6  
W88 OAF CAT SING N N 7  
W88 CAX CAT SING N N 8  
W88 CAX CAW DOUB N N 9  
W88 CAZ CAW SING N N 10 
W88 CAZ OAD DOUB N N 11 
W88 CAW CAP SING N N 12 
W88 CAP CAN SING N N 13 
W88 CAN CAM SING N N 14 
W88 CAM CAO SING N N 15 
W88 CAG CAI DOUB Y N 16 
W88 CAG CAU SING Y N 17 
W88 CAI CBB SING Y N 18 
W88 CAO CAU SING N N 19 
W88 CAU CAK DOUB Y N 20 
W88 CBB CAL DOUB Y N 21 
W88 CBB CBA SING Y N 22 
W88 CAL CAV SING Y N 23 
W88 CAK CBA SING Y N 24 
W88 CBA CAJ DOUB Y N 25 
W88 OAA CAS DOUB N N 26 
W88 CAV CAS SING N N 27 
W88 CAV CAH DOUB Y N 28 
W88 CAS OAE SING N N 29 
W88 CAJ CAH SING Y N 30 
W88 OAF H1  SING N N 31 
W88 NAR H2  SING N N 32 
W88 CAP H4  SING N N 33 
W88 CAP H5  SING N N 34 
W88 CAN H6  SING N N 35 
W88 CAN H7  SING N N 36 
W88 CAM H8  SING N N 37 
W88 CAM H9  SING N N 38 
W88 CAO H10 SING N N 39 
W88 CAO H11 SING N N 40 
W88 CAK H12 SING N N 41 
W88 CAJ H13 SING N N 42 
W88 CAH H14 SING N N 43 
W88 OAE H15 SING N N 44 
W88 CAL H16 SING N N 45 
W88 CAI H17 SING N N 46 
W88 CAG H18 SING N N 47 
W88 NAQ H19 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
W88 SMILES           ACDLabs              12.01 "O=C1NC(C(=O)O)=C(C(=O)N1)CCCCc3cc2ccc(C(=O)O)cc2cc3"                                                                                                      
W88 InChI            InChI                1.03  "InChI=1S/C20H18N2O6/c23-17-15(16(19(26)27)21-20(28)22-17)4-2-1-3-11-5-6-13-10-14(18(24)25)8-7-12(13)9-11/h5-10H,1-4H2,(H,24,25)(H,26,27)(H2,21,22,23,28)" 
W88 InChIKey         InChI                1.03  DCZIJZIECAAXJK-UHFFFAOYSA-N                                                                                                                                
W88 SMILES_CANONICAL CACTVS               3.370 "OC(=O)C1=C(CCCCc2ccc3cc(ccc3c2)C(O)=O)C(=O)NC(=O)N1"                                                                                                      
W88 SMILES           CACTVS               3.370 "OC(=O)C1=C(CCCCc2ccc3cc(ccc3c2)C(O)=O)C(=O)NC(=O)N1"                                                                                                      
W88 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "c1cc2cc(ccc2cc1CCCCC3=C(NC(=O)NC3=O)C(=O)O)C(=O)O"                                                                                                        
W88 SMILES           "OpenEye OEToolkits" 1.7.6 "c1cc2cc(ccc2cc1CCCCC3=C(NC(=O)NC3=O)C(=O)O)C(=O)O"                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
W88 "SYSTEMATIC NAME" ACDLabs              12.01 "5-[4-(6-carboxynaphthalen-2-yl)butyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid" 
W88 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "5-[4-(6-carboxynaphthalen-2-yl)butyl]-2,4-bis(oxidanylidene)-1H-pyrimidine-6-carboxylic acid"   
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
W88 "Create component" 2013-03-18 PDBJ 
W88 "Initial release"  2014-03-12 RCSB 
# 
