data_QM8
# 
_chem_comp.id                                    QM8 
_chem_comp.name                                  6-Sulfanyl-L-norleucine 
_chem_comp.type                                  "L-peptide linking" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C6 H13 N O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ALA 
_chem_comp.pdbx_synonyms                         "(2S)-2-azanyl-6-sulfanyl-hexanoic acid; 6-mercaptonorleucine" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-06-30 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        163.238 
_chem_comp.one_letter_code                       L 
_chem_comp.three_letter_code                     QM8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7NDU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QM8 N   N1  N 0 1 N N N Y Y N 31.064 10.999 69.799 -2.014 1.799  -0.087 N   QM8 1  
QM8 CA  C1  C 0 1 N N S Y N N 30.359 9.809  69.397 -1.946 0.380  -0.462 CA  QM8 2  
QM8 CB  C2  C 0 1 N N N N N N 30.848 9.364  68.026 -0.695 -0.251 0.154  CB  QM8 3  
QM8 CG  C3  C 0 1 N N N N N N 30.932 10.540 67.069 0.553  0.390  -0.457 CG  QM8 4  
QM8 CD  C4  C 0 1 N N N N N N 29.647 11.395 67.084 1.803  -0.241 0.159  CD  QM8 5  
QM8 CE  C5  C 0 1 N N N N N N 29.237 11.876 65.668 3.051  0.400  -0.451 CE  QM8 6  
QM8 SZ  S1  S 0 1 N N N N N N 30.707 11.864 64.580 4.534  -0.348 0.279  SZ  QM8 7  
QM8 C   C6  C 0 1 N N N Y N Y 30.768 8.749  70.386 -3.171 -0.333 0.047  C   QM8 8  
QM8 O   O1  O 0 1 N N N Y N Y 30.061 7.747  70.548 -3.824 0.150  0.942  O   QM8 9  
QM8 OXT O2  O 0 1 N Y N Y N Y 31.828 8.928  71.005 -3.538 -1.506 -0.493 OXT QM8 10 
QM8 H   H1  H 0 1 N N N Y Y N 30.741 11.290 70.700 -2.057 1.906  0.916  H   QM8 11 
QM8 H2  H2  H 0 1 N Y N Y Y N 32.044 10.807 69.842 -1.235 2.313  -0.472 H2  QM8 12 
QM8 HA  H4  H 0 1 N N N Y N N 29.268 9.953  69.397 -1.899 0.293  -1.547 HA  QM8 13 
QM8 HB1 H5  H 0 1 N N N N N N 30.149 8.619  67.619 -0.698 -0.086 1.231  HB1 QM8 14 
QM8 HB2 H6  H 0 1 N N N N N N 31.846 8.913  68.129 -0.690 -1.321 -0.050 HB2 QM8 15 
QM8 H7  H7  H 0 1 N N N N N N 31.091 10.157 66.050 0.556  0.225  -1.534 H7  QM8 16 
QM8 H8  H8  H 0 1 N N N N N N 31.783 11.174 67.360 0.548  1.461  -0.253 H8  QM8 17 
QM8 H9  H9  H 0 1 N N N N N N 29.817 12.276 67.720 1.801  -0.076 1.237  H9  QM8 18 
QM8 H10 H10 H 0 1 N N N N N N 28.827 10.793 67.503 1.808  -1.312 -0.044 H10 QM8 19 
QM8 H11 H11 H 0 1 N N N N N N 28.833 12.897 65.729 3.054  0.235  -1.529 H11 QM8 20 
QM8 H12 H12 H 0 1 N N N N N N 28.470 11.202 65.258 3.047  1.471  -0.248 H12 QM8 21 
QM8 H13 H13 H 0 1 N N N N N N 30.213 12.283 63.453 5.536  0.300  -0.341 H13 QM8 22 
QM8 HXT H14 H 0 1 N Y N Y N Y 31.982 8.195  71.589 -4.331 -1.927 -0.133 HXT QM8 23 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QM8 SZ  CE  SING N N 1  
QM8 CE  CD  SING N N 2  
QM8 CG  CD  SING N N 3  
QM8 CG  CB  SING N N 4  
QM8 CB  CA  SING N N 5  
QM8 CA  N   SING N N 6  
QM8 CA  C   SING N N 7  
QM8 C   O   DOUB N N 8  
QM8 C   OXT SING N N 9  
QM8 N   H   SING N N 10 
QM8 N   H2  SING N N 11 
QM8 CA  HA  SING N N 12 
QM8 CB  HB1 SING N N 13 
QM8 CB  HB2 SING N N 14 
QM8 CG  H7  SING N N 15 
QM8 CG  H8  SING N N 16 
QM8 CD  H9  SING N N 17 
QM8 CD  H10 SING N N 18 
QM8 CE  H11 SING N N 19 
QM8 CE  H12 SING N N 20 
QM8 SZ  H13 SING N N 21 
QM8 OXT HXT SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QM8 InChI            InChI                1.03    "InChI=1S/C6H13NO2S/c7-5(6(8)9)3-1-2-4-10/h5,10H,1-4,7H2,(H,8,9)/t5-/m0/s1" 
QM8 InChIKey         InChI                1.03    HBMWPJLCTYKAGL-YFKPBYRVSA-N                                                 
QM8 SMILES_CANONICAL CACTVS               3.385   "N[C@@H](CCCCS)C(O)=O"                                                      
QM8 SMILES           CACTVS               3.385   "N[CH](CCCCS)C(O)=O"                                                        
QM8 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "C(CCS)C[C@@H](C(=O)O)N"                                                    
QM8 SMILES           "OpenEye OEToolkits" 3.1.0.0 "C(CCS)CC(C(=O)O)N"                                                         
# 
_pdbx_chem_comp_identifier.comp_id           QM8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-2-azanyl-6-sulfanyl-hexanoic acid" 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 QM8 "(2S)-2-azanyl-6-sulfanyl-hexanoic acid" PDB     ? 
2 QM8 6-mercaptonorleucine                     PUBCHEM ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QM8 "Create component"         2020-06-30 PDBE 
QM8 "Initial release"          2022-01-26 RCSB 
QM8 "Modify leaving atom flag" 2022-02-08 PDBE 
QM8 "Modify internal type"     2022-02-10 PDBE 
QM8 "Modify backbone"          2023-11-03 PDBE 
QM8 "Modify PCM"               2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 QM8 LEU Norleucine    "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
2 QM8 LEU Sulfhydration "Named protein modification" "Amino-acid side chain" "Any position" ? ? ? ? 
# 
