data_QD8
# 
_chem_comp.id                                    QD8 
_chem_comp.name                                  "(S)-3-butyl-2-oxopentanedioic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H14 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "(3~{S})-3-butyl-2-oxidanylidene-pentanedioic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-10-25 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        202.204 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     QD8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BAY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
QD8 C6  C1  C 0 1 N N N 21.895 309.669 43.965 5.095  -0.128 0.334  C6  QD8 1  
QD8 C1  C2  C 0 1 N N N 18.884 314.137 45.493 -1.112 -0.663 -0.495 C1  QD8 2  
QD8 C2  C3  C 0 1 N N S 18.759 312.859 44.737 0.108  0.025  0.059  C2  QD8 3  
QD8 C3  C4  C 0 1 N N N 19.062 311.686 45.679 1.368  -0.670 -0.463 C3  QD8 4  
QD8 C8  C5  C 0 1 N N N 17.059 311.479 43.431 -1.050 2.210  0.247  C8  QD8 5  
QD8 C7  C6  C 0 1 N N N 17.340 312.761 44.172 0.113  1.490  -0.384 C7  QD8 6  
QD8 O1  O1  O 0 1 N N N 19.815 315.542 43.777 -1.272 -2.144 1.316  O1  QD8 7  
QD8 C5  C7  C 0 1 N N N 20.621 310.464 44.102 3.861  -0.747 -0.325 C5  QD8 8  
QD8 C   C8  C 0 1 N N N 19.913 315.181 45.030 -1.724 -1.804 0.243  C   QD8 9  
QD8 O   O2  O 0 1 N N N 20.757 315.633 45.792 -2.778 -2.457 -0.280 O   QD8 10 
QD8 C4  C9  C 0 1 N N N 20.435 311.056 45.487 2.602  -0.052 0.197  C4  QD8 11 
QD8 O2  O3  O 0 1 N N N 16.100 310.767 43.965 -1.318 3.480  -0.093 O2  QD8 12 
QD8 O3  O4  O 0 1 N N N 17.670 311.143 42.437 -1.741 1.644  1.061  O3  QD8 13 
QD8 O4  O5  O 0 1 N N N 18.189 314.373 46.467 -1.594 -0.291 -1.538 O4  QD8 14 
QD8 H1  H1  H 0 1 N N N 21.970 309.269 42.943 5.141  0.934  0.095  H1  QD8 15 
QD8 H2  H2  H 0 1 N N N 22.757 310.321 44.167 5.032  -0.255 1.415  H2  QD8 16 
QD8 H3  H3  H 0 1 N N N 21.887 308.837 44.685 5.992  -0.624 -0.037 H3  QD8 17 
QD8 H4  H4  H 0 1 N N N 19.480 312.848 43.906 0.091  -0.025 1.148  H4  QD8 18 
QD8 H5  H5  H 0 1 N N N 18.994 312.051 46.714 1.322  -1.732 -0.223 H5  QD8 19 
QD8 H6  H6  H 0 1 N N N 18.302 310.908 45.514 1.431  -0.543 -1.543 H6  QD8 20 
QD8 H7  H7  H 0 1 N N N 17.185 313.601 43.479 1.046  1.961  -0.072 H7  QD8 21 
QD8 H8  H8  H 0 1 N N N 16.629 312.840 45.008 0.026  1.541  -1.470 H8  QD8 22 
QD8 H9  H9  H 0 1 N N N 20.640 311.285 43.370 3.925  -0.620 -1.406 H9  QD8 23 
QD8 H10 H10 H 0 1 N N N 19.770 309.801 43.887 3.815  -1.809 -0.086 H10 QD8 24 
QD8 H11 H11 H 0 1 N N N 21.299 316.261 45.329 -3.141 -3.190 0.235  H11 QD8 25 
QD8 H12 H12 H 0 1 N N N 20.562 310.256 46.231 2.648  1.011  -0.043 H12 QD8 26 
QD8 H13 H13 H 0 1 N N N 21.202 311.829 45.645 2.538  -0.178 1.277  H13 QD8 27 
QD8 H14 H14 H 0 1 N N N 15.973 309.974 43.457 -2.074 3.900  0.338  H14 QD8 28 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
QD8 O3 C8  DOUB N N 1  
QD8 C8 O2  SING N N 2  
QD8 C8 C7  SING N N 3  
QD8 O1 C   DOUB N N 4  
QD8 C6 C5  SING N N 5  
QD8 C5 C4  SING N N 6  
QD8 C7 C2  SING N N 7  
QD8 C2 C1  SING N N 8  
QD8 C2 C3  SING N N 9  
QD8 C  C1  SING N N 10 
QD8 C  O   SING N N 11 
QD8 C4 C3  SING N N 12 
QD8 C1 O4  DOUB N N 13 
QD8 C6 H1  SING N N 14 
QD8 C6 H2  SING N N 15 
QD8 C6 H3  SING N N 16 
QD8 C2 H4  SING N N 17 
QD8 C3 H5  SING N N 18 
QD8 C3 H6  SING N N 19 
QD8 C7 H7  SING N N 20 
QD8 C7 H8  SING N N 21 
QD8 C5 H9  SING N N 22 
QD8 C5 H10 SING N N 23 
QD8 O  H11 SING N N 24 
QD8 C4 H12 SING N N 25 
QD8 C4 H13 SING N N 26 
QD8 O2 H14 SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
QD8 InChI            InChI                1.06    "InChI=1S/C9H14O5/c1-2-3-4-6(5-7(10)11)8(12)9(13)14/h6H,2-5H2,1H3,(H,10,11)(H,13,14)/t6-/m0/s1" 
QD8 InChIKey         InChI                1.06    RVKQLIHFWCFUHE-LURJTMIESA-N                                                                     
QD8 SMILES_CANONICAL CACTVS               3.385   "CCCC[C@@H](CC(O)=O)C(=O)C(O)=O"                                                                
QD8 SMILES           CACTVS               3.385   "CCCC[CH](CC(O)=O)C(=O)C(O)=O"                                                                  
QD8 SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "CCCC[C@@H](CC(=O)O)C(=O)C(=O)O"                                                                
QD8 SMILES           "OpenEye OEToolkits" 3.1.0.0 "CCCCC(CC(=O)O)C(=O)C(=O)O"                                                                     
# 
_pdbx_chem_comp_identifier.comp_id           QD8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "(3~{S})-3-butyl-2-oxidanylidene-pentanedioic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
QD8 "Create component" 2022-10-25 PDBE 
QD8 "Initial release"  2022-11-02 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      QD8 
_pdbx_chem_comp_synonyms.name         "(3~{S})-3-butyl-2-oxidanylidene-pentanedioic acid" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
