data_ON8
# 
_chem_comp.id                                    ON8 
_chem_comp.name                                  "1-[(3~{S})-3-azanyl-4-oxidanylidene-butoxy]guanidine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C5 H12 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-03-20 
_chem_comp.pdbx_modified_date                    2023-09-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   OBS 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        160.174 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ON8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6YD7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ON8 N   N1  N 0 1 N N N 47.135 -36.409 -9.810  -2.792 1.324  0.569  N   ON8 1  
ON8 CA  C1  C 0 1 N N S 45.757 -36.348 -10.310 -2.612 0.272  -0.441 CA  ON8 2  
ON8 CB  C2  C 0 1 N N N 45.788 -36.160 -11.831 -1.325 -0.501 -0.147 CB  ON8 3  
ON8 CG  C3  C 0 1 N N N 46.278 -34.749 -12.168 -0.122 0.429  -0.314 CG  ON8 4  
ON8 C   C4  C 0 1 N N N 45.142 -37.742 -10.051 -3.786 -0.672 -0.397 C   ON8 5  
ON8 OD  O1  O 0 1 N N N 46.387 -34.732 -13.600 1.081  -0.293 -0.040 OD  ON8 6  
ON8 NE  N2  N 0 1 N N N 46.819 -33.492 -14.144 2.259  0.482  -0.167 NE  ON8 7  
ON8 CZ  C5  C 0 1 N N N 48.125 -33.390 -14.436 3.487  -0.090 0.069  CZ  ON8 8  
ON8 NH1 N3  N 0 1 N N N 48.597 -32.285 -15.034 3.566  -1.346 0.409  NH1 ON8 9  
ON8 NH2 N4  N 0 1 N N N 48.966 -34.379 -14.114 4.631  0.662  -0.054 NH2 ON8 10 
ON8 OA1 O2  O 0 1 N N N 45.755 -38.738 -10.421 -4.680 -0.488 0.393  OA1 ON8 11 
ON8 H1  H1  H 0 1 N N N 47.125 -36.532 -8.818  -2.855 0.929  1.495  H1  ON8 12 
ON8 H2  H2  H 0 1 N N N 47.610 -37.179 -10.236 -2.050 2.006  0.516  H2  ON8 13 
ON8 H4  H4  H 0 1 N N N 45.169 -35.557 -9.821  -2.546 0.725  -1.430 H4  ON8 14 
ON8 H5  H5  H 0 1 N N N 44.776 -36.302 -12.237 -1.353 -0.880 0.874  H5  ON8 15 
ON8 H6  H6  H 0 1 N N N 46.469 -36.900 -12.277 -1.236 -1.337 -0.842 H6  ON8 16 
ON8 H7  H7  H 0 1 N N N 47.256 -34.557 -11.702 -0.094 0.808  -1.336 H7  ON8 17 
ON8 H8  H8  H 0 1 N N N 45.554 -33.995 -11.825 -0.210 1.265  0.380  H8  ON8 18 
ON8 H9  H9  H 0 1 N N N 44.189 -37.838 -9.553  -3.827 -1.514 -1.073 H9  ON8 19 
ON8 H10 H10 H 0 1 N N N 46.184 -32.736 -14.301 2.200  1.416  -0.420 H10 ON8 20 
ON8 H11 H11 H 0 1 N N N 49.585 -32.331 -15.179 4.432  -1.750 0.575  H11 ON8 21 
ON8 H12 H12 H 0 1 N N N 48.622 -35.198 -13.654 4.572  1.596  -0.307 H12 ON8 22 
ON8 H13 H13 H 0 1 N N N 49.938 -34.300 -14.333 5.497  0.258  0.112  H13 ON8 23 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ON8 NH1 CZ  DOUB N N 1  
ON8 CZ  NE  SING N N 2  
ON8 CZ  NH2 SING N N 3  
ON8 NE  OD  SING N N 4  
ON8 OD  CG  SING N N 5  
ON8 CG  CB  SING N N 6  
ON8 CB  CA  SING N N 7  
ON8 OA1 C   DOUB N N 8  
ON8 CA  C   SING N N 9  
ON8 CA  N   SING N N 10 
ON8 N   H1  SING N N 11 
ON8 N   H2  SING N N 12 
ON8 CA  H4  SING N N 13 
ON8 CB  H5  SING N N 14 
ON8 CB  H6  SING N N 15 
ON8 CG  H7  SING N N 16 
ON8 CG  H8  SING N N 17 
ON8 C   H9  SING N N 18 
ON8 NE  H10 SING N N 19 
ON8 NH1 H11 SING N N 20 
ON8 NH2 H12 SING N N 21 
ON8 NH2 H13 SING N N 22 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ON8 InChI            InChI                1.03  "InChI=1S/C5H12N4O2/c6-4(3-10)1-2-11-9-5(7)8/h3-4H,1-2,6H2,(H4,7,8,9)/t4-/m0/s1" 
ON8 InChIKey         InChI                1.03  UPVLEVGRMHPBJM-BYPYZUCNSA-N                                                      
ON8 SMILES_CANONICAL CACTVS               3.385 "N[C@@H](CCONC(N)=N)C=O"                                                         
ON8 SMILES           CACTVS               3.385 "N[CH](CCONC(N)=N)C=O"                                                           
ON8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "[H]/N=C(/N)\NOCC[C@@H](C=O)N"                                                   
ON8 SMILES           "OpenEye OEToolkits" 2.0.7 "C(CONC(=N)N)C(C=O)N"                                                            
# 
_pdbx_chem_comp_identifier.comp_id           ON8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "1-[(3~{S})-3-azanyl-4-oxidanylidene-butoxy]guanidine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ON8 "Create component"   2020-03-20 PDBE 
ON8 "Initial release"    2021-02-17 RCSB 
ON8 "Obsolete component" 2022-10-10 PDBE 
# 
