data_MY8
# 
_chem_comp.id                                    MY8 
_chem_comp.name                                  "Mycinamicin VIII" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H49 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-11-22 
_chem_comp.pdbx_modified_date                    2016-07-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        507.702 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     MY8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5FOI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
MY8 O1   O1   O 0 1 N N N 32.603 14.447 33.840 -4.819 -1.420 -0.409 O1   MY8 1  
MY8 C1   C1   C 0 1 N N R 32.351 14.015 32.533 -6.053 -1.222 0.326  C1   MY8 2  
MY8 C2   C2   C 0 1 N N N 30.851 14.282 32.554 -7.218 -1.842 -0.451 C2   MY8 3  
MY8 C3   C3   C 0 1 N N N 30.536 15.770 32.454 -7.032 -3.359 -0.526 C3   MY8 4  
MY8 C4   C4   C 0 1 N N S 32.372 12.515 32.552 -6.319 0.274  0.521  C4   MY8 5  
MY8 C5   C5   C 0 1 N N N 32.196 12.243 31.084 -7.381 0.460  1.607  C5   MY8 6  
MY8 C6   C6   C 0 1 N N N 33.764 12.001 32.698 -5.046 0.955  0.944  C6   MY8 7  
MY8 C7   C7   C 0 1 N N N 34.230 11.740 33.920 -4.361 1.706  0.087  C7   MY8 8  
MY8 C8   C8   C 0 1 N N N 35.621 11.521 34.225 -3.088 2.308  0.507  C8   MY8 9  
MY8 C9   C9   C 0 1 N N N 36.065 11.376 35.483 -2.397 3.055  -0.346 C9   MY8 10 
MY8 C10  C10  C 0 1 N N S 37.532 11.293 35.635 -1.061 3.628  0.039  C10  MY8 11 
MY8 O2   O2   O 0 1 N N N 38.263 11.362 34.658 -0.871 3.561  1.451  O2   MY8 12 
MY8 C11  C11  C 0 1 N N R 38.085 11.655 36.930 0.037  2.817  -0.668 C11  MY8 13 
MY8 C12  C12  C 0 1 N N N 37.924 10.387 37.772 0.267  3.417  -2.058 C12  MY8 14 
MY8 C13  C13  C 0 1 N N N 37.481 12.873 37.576 -0.412 1.362  -0.786 C13  MY8 15 
MY8 C14  C14  C 0 1 N N S 37.683 14.113 36.685 0.695  0.498  -1.386 C14  MY8 16 
MY8 C15  C15  C 0 1 N N N 39.167 14.456 36.644 0.305  0.035  -2.788 C15  MY8 17 
MY8 C16  C16  C 0 1 N N S 37.240 15.456 37.172 1.022  -0.674 -0.467 C16  MY8 18 
MY8 O3   O3   O 0 1 N N N 37.735 15.450 38.534 2.354  -1.130 -0.743 O3   MY8 19 
MY8 C17  C17  C 0 1 N N S 38.376 16.692 38.893 3.344  -0.606 0.144  C17  MY8 20 
MY8 O4   O4   O 0 1 N N N 39.717 16.704 38.336 3.537  0.784  -0.125 O4   MY8 21 
MY8 C18  C18  C 0 1 N N R 40.414 17.901 38.728 4.493  1.416  0.728  C18  MY8 22 
MY8 C19  C19  C 0 1 N N N 41.518 18.297 37.814 4.595  2.900  0.369  C19  MY8 23 
MY8 C20  C20  C 0 1 N N N 40.745 18.014 40.176 5.859  0.751  0.542  C20  MY8 24 
MY8 C21  C21  C 0 1 N N S 39.391 18.010 40.823 5.735  -0.745 0.845  C21  MY8 25 
MY8 N1   N1   N 0 1 N N N 39.479 17.954 42.292 7.024  -1.405 0.597  N1   MY8 26 
MY8 C22  C22  C 0 1 N N N 40.600 17.186 42.826 7.512  -1.114 -0.758 C22  MY8 27 
MY8 C23  C23  C 0 1 N N N 39.429 19.260 42.948 8.017  -1.019 1.608  C23  MY8 28 
MY8 C24  C24  C 0 1 N N R 38.754 16.729 40.350 4.664  -1.353 -0.065 C24  MY8 29 
MY8 O5   O5   O 0 1 N N N 37.542 16.637 41.033 4.489  -2.733 0.259  O5   MY8 30 
MY8 C25  C25  C 0 1 N N S 35.759 15.322 37.274 0.055  -1.845 -0.600 C25  MY8 31 
MY8 C26  C26  C 0 1 N N N 35.193 16.679 37.688 0.706  -3.087 0.038  C26  MY8 32 
MY8 C27  C27  C 0 1 N N N 35.308 15.388 35.869 -1.224 -1.554 0.144  C27  MY8 33 
MY8 C28  C28  C 0 1 N N N 34.278 14.715 35.380 -2.397 -1.676 -0.472 C28  MY8 34 
MY8 C29  C29  C 0 1 N N N 33.932 14.826 33.941 -3.647 -1.418 0.255  C29  MY8 35 
MY8 O6   O6   O 0 1 N N N 34.683 15.221 33.048 -3.613 -1.221 1.454  O6   MY8 36 
MY8 HA   HA   H 0 1 N N N 32.907 14.495 31.714 -5.979 -1.703 1.302  HA   MY8 37 
MY8 H21C H21C H 0 0 N N N 30.386 13.762 31.704 -8.155 -1.615 0.058  H21C MY8 38 
MY8 H22C H22C H 0 0 N N N 30.434 13.893 33.494 -7.243 -1.429 -1.459 H22C MY8 39 
MY8 H4   H4   H 0 1 N N N 31.625 12.044 33.208 -6.670 0.709  -0.414 H4   MY8 40 
MY8 H31C H31C H 0 0 N N N 29.446 15.917 32.473 -7.007 -3.772 0.482  H31C MY8 41 
MY8 H32C H32C H 0 0 N N N 30.992 16.299 33.304 -7.862 -3.800 -1.079 H32C MY8 42 
MY8 H33C H33C H 0 0 N N N 30.943 16.168 31.513 -6.095 -3.585 -1.035 H33C MY8 43 
MY8 H51C H51C H 0 0 N N N 32.188 11.157 30.910 -7.023 0.028  2.542  H51C MY8 44 
MY8 H52C H52C H 0 0 N N N 31.244 12.676 30.743 -7.573 1.524  1.749  H52C MY8 45 
MY8 H53C H53C H 0 0 N N N 33.027 12.698 30.525 -8.302 -0.038 1.305  H53C MY8 46 
MY8 H6   H6   H 0 1 N N N 34.385 11.843 31.828 -4.677 0.843  1.953  H6   MY8 47 
MY8 H7   H7   H 0 1 N N N 33.520 11.690 34.732 -4.745 1.873  -0.908 H7   MY8 48 
MY8 H8   H8   H 0 1 N N N 36.331 11.472 33.413 -2.719 2.151  1.511  H8   MY8 49 
MY8 H9   H9   H 0 1 N N N 35.394 11.323 36.328 -2.813 3.259  -1.325 H9   MY8 50 
MY8 H10  H10  H 0 1 N N N 37.579 10.204 35.779 -1.000 4.666  -0.294 H10  MY8 51 
MY8 H2   H2   H 0 1 N N N 39.169 11.292 34.934 -1.534 4.046  1.961  H2   MY8 52 
MY8 H11  H11  H 0 1 N N N 39.163 11.838 36.810 0.958  2.874  -0.092 H11  MY8 53 
MY8 H121 H121 H 0 0 N N N 38.319 10.565 38.783 0.579  4.456  -1.958 H121 MY8 54 
MY8 H122 H122 H 0 0 N N N 36.858 10.123 37.837 1.044  2.852  -2.573 H122 MY8 55 
MY8 H123 H123 H 0 0 N N N 38.479 9.562  37.301 -0.659 3.369  -2.632 H123 MY8 56 
MY8 H131 H131 H 0 0 N N N 36.404 12.707 37.726 -0.669 0.988  0.208  H131 MY8 57 
MY8 H132 H132 H 0 0 N N N 37.965 13.044 38.549 -1.300 1.300  -1.415 H132 MY8 58 
MY8 H14  H14  H 0 1 N N N 37.304 13.919 35.671 1.606  1.115  -1.477 H14  MY8 59 
MY8 H151 H151 H 0 0 N N N 39.322 15.341 36.010 0.147  0.905  -3.426 H151 MY8 60 
MY8 H152 H152 H 0 0 N N N 39.522 14.669 37.663 1.104  -0.580 -3.203 H152 MY8 61 
MY8 H153 H153 H 0 0 N N N 39.728 13.605 36.230 -0.614 -0.549 -2.736 H153 MY8 62 
MY8 H16  H16  H 0 1 N N N 37.580 16.299 36.553 0.998  -0.321 0.574  H16  MY8 63 
MY8 H25  H25  H 0 1 N N N 35.394 14.465 37.859 -0.174 -2.091 -1.630 H25  MY8 64 
MY8 H17  H17  H 0 1 N N N 37.788 17.575 38.601 3.013  -0.734 1.174  H17  MY8 65 
MY8 H24  H24  H 0 1 N N N 39.412 15.879 40.584 4.975  -1.258 -1.106 H24  MY8 66 
MY8 H18  H18  H 0 1 N N N 39.668 18.696 38.579 4.177  1.315  1.766  H18  MY8 67 
MY8 H191 H191 H 0 0 N N N 41.992 19.216 38.188 3.622  3.374  0.500  H191 MY8 68 
MY8 H192 H192 H 0 0 N N N 42.265 17.491 37.771 5.324  3.382  1.019  H192 MY8 69 
MY8 H193 H193 H 0 0 N N N 41.114 18.477 36.807 4.911  3.002  -0.670 H193 MY8 70 
MY8 H201 H201 H 0 0 N N N 41.349 17.159 40.513 6.194  0.888  -0.486 H201 MY8 71 
MY8 H202 H202 H 0 0 N N N 41.284 18.949 40.388 6.580  1.203  1.224  H202 MY8 72 
MY8 H21  H21  H 0 1 N N N 38.802 18.879 40.495 5.450  -0.883 1.888  H21  MY8 73 
MY8 H221 H221 H 0 0 N N N 40.571 17.209 43.925 7.642  -0.038 -0.874 H221 MY8 74 
MY8 H222 H222 H 0 0 N N N 40.529 16.144 42.480 8.467  -1.615 -0.915 H222 MY8 75 
MY8 H223 H223 H 0 0 N N N 41.545 17.625 42.475 6.788  -1.474 -1.489 H223 MY8 76 
MY8 H231 H231 H 0 0 N N N 39.500 19.127 44.038 7.615  -1.209 2.603  H231 MY8 77 
MY8 H232 H232 H 0 0 N N N 40.269 19.878 42.599 8.926  -1.604 1.467  H232 MY8 78 
MY8 H233 H233 H 0 0 N N N 38.480 19.758 42.701 8.247  0.041  1.506  H233 MY8 79 
MY8 H5   H5   H 0 1 N N N 37.703 16.654 41.969 3.820  -3.181 -0.277 H5   MY8 80 
MY8 H261 H261 H 0 0 N N N 34.098 16.610 37.771 0.906  -2.892 1.091  H261 MY8 81 
MY8 H262 H262 H 0 0 N N N 35.617 16.972 38.660 0.032  -3.938 -0.052 H262 MY8 82 
MY8 H263 H263 H 0 0 N N N 35.456 17.432 36.931 1.642  -3.310 -0.475 H263 MY8 83 
MY8 H27  H27  H 0 1 N N N 35.856 16.029 35.194 -1.186 -1.249 1.182  H27  MY8 84 
MY8 H28  H28  H 0 1 N N N 33.689 14.084 36.029 -2.425 -1.970 -1.511 H28  MY8 85 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
MY8 O1  C1   SING N N 1  
MY8 O1  C29  SING N N 2  
MY8 C1  C2   SING N N 3  
MY8 C1  C4   SING N N 4  
MY8 C2  C3   SING N N 5  
MY8 C4  C5   SING N N 6  
MY8 C4  C6   SING N N 7  
MY8 C6  C7   DOUB N E 8  
MY8 C7  C8   SING N N 9  
MY8 C8  C9   DOUB N E 10 
MY8 C9  C10  SING N N 11 
MY8 C10 O2   SING N N 12 
MY8 C10 C11  SING N N 13 
MY8 C11 C12  SING N N 14 
MY8 C11 C13  SING N N 15 
MY8 C13 C14  SING N N 16 
MY8 C14 C15  SING N N 17 
MY8 C14 C16  SING N N 18 
MY8 C16 O3   SING N N 19 
MY8 C16 C25  SING N N 20 
MY8 O3  C17  SING N N 21 
MY8 C17 O4   SING N N 22 
MY8 C17 C24  SING N N 23 
MY8 O4  C18  SING N N 24 
MY8 C18 C19  SING N N 25 
MY8 C18 C20  SING N N 26 
MY8 C20 C21  SING N N 27 
MY8 C21 N1   SING N N 28 
MY8 C21 C24  SING N N 29 
MY8 N1  C22  SING N N 30 
MY8 N1  C23  SING N N 31 
MY8 C24 O5   SING N N 32 
MY8 C25 C26  SING N N 33 
MY8 C25 C27  SING N N 34 
MY8 C27 C28  DOUB N E 35 
MY8 C28 C29  SING N N 36 
MY8 C29 O6   DOUB N N 37 
MY8 C1  HA   SING N N 38 
MY8 C2  H21C SING N N 39 
MY8 C2  H22C SING N N 40 
MY8 C4  H4   SING N N 41 
MY8 C3  H31C SING N N 42 
MY8 C3  H32C SING N N 43 
MY8 C3  H33C SING N N 44 
MY8 C5  H51C SING N N 45 
MY8 C5  H52C SING N N 46 
MY8 C5  H53C SING N N 47 
MY8 C6  H6   SING N N 48 
MY8 C7  H7   SING N N 49 
MY8 C8  H8   SING N N 50 
MY8 C9  H9   SING N N 51 
MY8 C10 H10  SING N N 52 
MY8 O2  H2   SING N N 53 
MY8 C11 H11  SING N N 54 
MY8 C12 H121 SING N N 55 
MY8 C12 H122 SING N N 56 
MY8 C12 H123 SING N N 57 
MY8 C13 H131 SING N N 58 
MY8 C13 H132 SING N N 59 
MY8 C14 H14  SING N N 60 
MY8 C15 H151 SING N N 61 
MY8 C15 H152 SING N N 62 
MY8 C15 H153 SING N N 63 
MY8 C16 H16  SING N N 64 
MY8 C25 H25  SING N N 65 
MY8 C17 H17  SING N N 66 
MY8 C24 H24  SING N N 67 
MY8 C18 H18  SING N N 68 
MY8 C19 H191 SING N N 69 
MY8 C19 H192 SING N N 70 
MY8 C19 H193 SING N N 71 
MY8 C20 H201 SING N N 72 
MY8 C20 H202 SING N N 73 
MY8 C21 H21  SING N N 74 
MY8 C22 H221 SING N N 75 
MY8 C22 H222 SING N N 76 
MY8 C22 H223 SING N N 77 
MY8 C23 H231 SING N N 78 
MY8 C23 H232 SING N N 79 
MY8 C23 H233 SING N N 80 
MY8 O5  H5   SING N N 81 
MY8 C26 H261 SING N N 82 
MY8 C26 H262 SING N N 83 
MY8 C26 H263 SING N N 84 
MY8 C27 H27  SING N N 85 
MY8 C28 H28  SING N N 86 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
MY8 InChI            InChI                1.03  
"InChI=1S/C29H49NO6/c1-9-25-18(2)12-10-11-13-24(31)20(4)16-21(5)28(19(3)14-15-26(32)35-25)36-29-27(33)23(30(7)8)17-22(6)34-29/h10-15,18-25,27-29,31,33H,9,16-17H2,1-8H3/b12-10+,13-11+,15-14+/t18-,19-,20+,21-,22+,23-,24+,25+,27+,28+,29-/m0/s1" 
MY8 InChIKey         InChI                1.03  ZWHLYXQJICTUSD-JUFBBUGVSA-N 
MY8 SMILES_CANONICAL CACTVS               3.385 "CC[C@H]1OC(=O)/C=C/[C@H](C)[C@@H](O[C@@H]2O[C@H](C)C[C@@H]([C@H]2O)N(C)C)[C@@H](C)C[C@@H](C)[C@H](O)/C=C/C=C/[C@@H]1C" 
MY8 SMILES           CACTVS               3.385 "CC[CH]1OC(=O)C=C[CH](C)[CH](O[CH]2O[CH](C)C[CH]([CH]2O)N(C)C)[CH](C)C[CH](C)[CH](O)C=CC=C[CH]1C" 
MY8 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CC[C@@H]1[C@H](/C=C/C=C/[C@H]([C@@H](C[C@@H]([C@@H]([C@H](/C=C/C(=O)O1)C)O[C@H]2[C@@H]([C@H](C[C@H](O2)C)N(C)C)O)C)C)O)C" 
MY8 SMILES           "OpenEye OEToolkits" 1.7.6 "CCC1C(C=CC=CC(C(CC(C(C(C=CC(=O)O1)C)OC2C(C(CC(O2)C)N(C)C)O)C)C)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
MY8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(3E,5S,6S,7S,9R,10S,11E,13E,15S,16R)-6-[(2S,3R,4S,6R)-4-(dimethylamino)-6-methyl-3-oxidanyl-oxan-2-yl]oxy-16-ethyl-5,7,9,15-tetramethyl-10-oxidanyl-1-oxacyclohexadeca-3,11,13-trien-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
MY8 "Create component" 2015-11-22 EBI  
MY8 "Initial release"  2016-07-27 RCSB 
# 
