data_M58
#

_chem_comp.id                                   M58
_chem_comp.name                                 "(~{R})-azanyl(pyridin-3-yl)methanethiol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C6 H8 N2 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-10-03
_chem_comp.pdbx_modified_date                   2020-02-28
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       140.206
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    M58
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6T0A
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
M58  C02  C1  C  0  1  N  N  R  11.014  23.748  -5.587  -1.296  -0.052   0.680  C02  M58   1  
M58  C04  C2  C  0  1  Y  N  N  11.389  25.204  -5.871   0.169  -0.005   0.331  C04  M58   2  
M58  C05  C3  C  0  1  Y  N  N  10.404  26.073  -6.283   0.948   1.074   0.717  C05  M58   3  
M58  C06  C4  C  0  1  Y  N  N  10.726  27.384  -6.553   2.293   1.072   0.378  C06  M58   4  
M58  C07  C5  C  0  1  Y  N  N  12.054  27.774  -6.403   2.808   0.001  -0.327  C07  M58   5  
M58  C09  C6  C  0  1  Y  N  N  12.692  25.659  -5.756   0.754  -1.041  -0.373  C09  M58   6  
M58  N01  N1  N  0  1  N  N  N  11.343  22.872  -6.712  -1.717  -1.450   0.844  N01  M58   7  
M58  N08  N2  N  0  1  Y  N  N  12.989  26.908  -6.013   2.036  -1.009  -0.678  N08  M58   8  
M58  S03  S1  S  0  1  N  N  N   9.247  23.579  -5.215  -2.260   0.717  -0.650  S03  M58   9  
M58  H1   H1  H  0  1  N  N  N  11.545  23.412  -4.684  -1.465   0.490   1.611  H1   M58  10  
M58  H2   H2  H  0  1  N  N  N   9.386  25.729  -6.394   0.518   1.898   1.267  H2   M58  11  
M58  H3   H3  H  0  1  N  N  N   9.972  28.088  -6.871   2.930   1.896   0.662  H3   M58  12  
M58  H4   H4  H  0  1  N  N  N  12.332  28.798  -6.607   3.854  -0.008  -0.595  H4   M58  13  
M58  H5   H5  H  0  1  N  N  N  13.471  24.976  -5.451   0.154  -1.887  -0.674  H5   M58  14  
M58  H6   H6  H  0  1  N  N  N  11.084  21.932  -6.490  -2.696  -1.508   1.078  H6   M58  15  
M58  H7   H7  H  0  1  N  N  N  10.844  23.172  -7.525  -1.511  -1.988   0.016  H7   M58  16  
M58  H9   H9  H  0  1  N  N  N   9.102  24.398  -4.216  -1.959  -0.041  -1.719  H9   M58  17  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
M58  N01  C02  SING  N  N   1  
M58  C06  C07  DOUB  Y  N   2  
M58  C06  C05  SING  Y  N   3  
M58  C07  N08  SING  Y  N   4  
M58  C05  C04  DOUB  Y  N   5  
M58  N08  C09  DOUB  Y  N   6  
M58  C04  C09  SING  Y  N   7  
M58  C04  C02  SING  N  N   8  
M58  C02  S03  SING  N  N   9  
M58  C02  H1   SING  N  N  10  
M58  C05  H2   SING  N  N  11  
M58  C06  H3   SING  N  N  12  
M58  C07  H4   SING  N  N  13  
M58  C09  H5   SING  N  N  14  
M58  N01  H6   SING  N  N  15  
M58  N01  H7   SING  N  N  16  
M58  S03  H9   SING  N  N  17  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
M58  InChI             InChI                 1.03   "InChI=1S/C6H8N2S/c7-6(9)5-2-1-3-8-4-5/h1-4,6,9H,7H2/t6-/m1/s1"  
M58  InChIKey          InChI                 1.03   FNWRZJSHJIXOOI-ZCFIWIBFSA-N  
M58  SMILES_CANONICAL  CACTVS                3.385  "N[C@H](S)c1cccnc1"  
M58  SMILES            CACTVS                3.385  "N[CH](S)c1cccnc1"  
M58  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cnc1)[C@H](N)S"  
M58  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cnc1)C(N)S"  
#
_pdbx_chem_comp_identifier.comp_id          M58
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(~{R})-azanyl(pyridin-3-yl)methanethiol"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
M58  "Create component"  2019-10-03  PDBE  
M58  "Initial release"   2020-03-04  RCSB  
##
