data_G48
# 
_chem_comp.id                                    G48 
_chem_comp.name                                  "2'-O-METHYOXYETHYL-GUANOSINE-5'-MONOPHOSPHATE" 
_chem_comp.type                                  "RNA LINKING" 
_chem_comp.pdbx_type                             ATOMN 
_chem_comp.formula                               "C13 H20 N5 O9 P" 
_chem_comp.mon_nstd_parent_comp_id               G 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     1999-05-12 
_chem_comp.pdbx_modified_date                    2013-01-10 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        421.300 
_chem_comp.one_letter_code                       G 
_chem_comp.three_letter_code                     G48 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        468D 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
G48 P      P      P 0 1 N N N 30.232 -3.179 3.255  5.718  -0.480 -0.016 P      G48 1  
G48 OP1    OP1    O 0 1 N N N 31.292 -3.542 2.316  6.517  0.749  0.186  OP1    G48 2  
G48 OP3    OP3    O 0 1 N Y N 29.690 -4.217 4.153  5.592  -1.273 1.380  OP3    G48 3  
G48 "O5'"  "O5'"  O 0 1 N N N 30.642 -1.928 4.139  4.249  -0.085 -0.544 "O5'"  G48 4  
G48 "C5'"  "C5'"  C 0 1 N N N 31.094 -0.742 3.523  3.393  0.826  0.148  "C5'"  G48 5  
G48 "C4'"  "C4'"  C 0 1 N N R 31.316 0.326  4.550  2.080  0.976  -0.623 "C4'"  G48 6  
G48 "O4'"  "O4'"  O 0 1 N N N 30.046 0.820  5.035  1.355  -0.265 -0.600 "O4'"  G48 7  
G48 "C3'"  "C3'"  C 0 1 N N R 32.036 -0.092 5.816  1.192  2.037  0.056  "C3'"  G48 8  
G48 "O3'"  "O3'"  O 0 1 N N N 33.428 -0.205 5.646  0.916  3.110  -0.847 "O3'"  G48 9  
G48 "C2'"  "C2'"  C 0 1 N N R 31.634 1.010  6.776  -0.109 1.275  0.407  "C2'"  G48 10 
G48 "O2'"  "O2'"  O 0 1 N N N 32.374 2.190  6.507  -1.259 2.082  0.146  "O2'"  G48 11 
G48 "C1'"  "C1'"  C 0 1 N N R 30.167 1.189  6.400  -0.049 0.067  -0.562 "C1'"  G48 12 
G48 N9     N9     N 0 1 Y N N 29.375 0.258  7.193  -0.831 -1.055 -0.037 N9     G48 13 
G48 C8     C8     C 0 1 Y N N 28.935 -1.003 6.836  -0.369 -2.052 0.773  C8     G48 14 
G48 N7     N7     N 0 1 Y N N 28.268 -1.593 7.788  -1.334 -2.881 1.046  N7     G48 15 
G48 C5     C5     C 0 1 Y N N 28.266 -0.662 8.829  -2.468 -2.468 0.430  C5     G48 16 
G48 C6     C6     C 0 1 N N N 27.702 -0.720 10.157 -3.792 -2.961 0.371  C6     G48 17 
G48 O6     O6     O 0 1 N N N 27.039 -1.615 10.685 -4.107 -3.979 0.965  O6     G48 18 
G48 N1     N1     N 0 1 N N N 27.991 0.428  10.885 -4.700 -2.277 -0.360 N1     G48 19 
G48 C2     C2     C 0 1 N N N 28.722 1.497  10.418 -4.337 -1.141 -1.020 C2     G48 20 
G48 N2     N2     N 0 1 N N N 28.966 2.486  11.284 -5.280 -0.467 -1.755 N2     G48 21 
G48 N3     N3     N 0 1 N N N 29.201 1.582  9.196  -3.111 -0.672 -0.972 N3     G48 22 
G48 C4     C4     C 0 1 Y N N 28.950 0.476  8.466  -2.160 -1.292 -0.264 C4     G48 23 
G48 "CA'"  "CA'"  C 0 1 N N N 32.117 3.305  7.355  -1.693 2.855  1.267  "CA'"  G48 24 
G48 "CB'"  "CB'"  C 0 1 N N N 33.100 4.411  7.077  -2.923 3.676  0.875  "CB'"  G48 25 
G48 "OC'"  "OC'"  O 0 1 N N N 34.470 3.978  7.313  -4.009 2.795  0.580  "OC'"  G48 26 
G48 "CD'"  "CD'"  C 0 1 N N N 35.403 4.953  6.786  -5.214 3.464  0.201  "CD'"  G48 27 
G48 OP2    OP2    O 0 1 N N N 29.110 -2.525 2.315  6.444  -1.420 -1.103 OP2    G48 28 
G48 HOP3   HOP3   H 0 0 N Y N 30.134 -5.041 3.989  5.079  -2.091 1.322  HOP3   G48 29 
G48 "H5'"  "H5'"  H 0 1 N N N 32.040 -0.943 2.999  3.186  0.443  1.147  "H5'"  G48 30 
G48 "H5''" "H5''" H 0 0 N N N 30.340 -0.399 2.800  3.882  1.797  0.225  "H5''" G48 31 
G48 "H4'"  "H4'"  H 0 1 N N N 31.876 1.151  4.086  2.286  1.266  -1.653 "H4'"  G48 32 
G48 "H3'"  "H3'"  H 0 1 N N N 31.613 -1.044 6.169  1.670  2.412  0.961  "H3'"  G48 33 
G48 "HO3'" "HO3'" H 0 0 N Y N 33.827 -0.468 6.467  1.703  3.585  -1.145 "HO3'" G48 34 
G48 "H2'"  "H2'"  H 0 1 N N N 31.733 0.679  7.820  -0.097 0.942  1.444  "H2'"  G48 35 
G48 "H1'"  "H1'"  H 0 1 N N N 29.853 2.229  6.573  -0.403 0.352  -1.553 "H1'"  G48 36 
G48 H8     H8     H 0 1 N N N 29.124 -1.451 5.872  0.646  -2.139 1.133  H8     G48 37 
G48 H1     H1     H 0 1 N N N 27.641 0.482  11.820 -5.614 -2.596 -0.415 H1     G48 38 
G48 H21    H21    H 0 1 N N N 29.507 3.278  11.000 -6.190 -0.801 -1.799 H21    G48 39 
G48 H22    H22    H 0 1 N N N 28.608 2.434  12.216 -5.037 0.343  -2.230 H22    G48 40 
G48 HCA2   HCA2   H 0 0 N N N 31.096 3.672  7.172  -1.948 2.189  2.091  HCA2   G48 41 
G48 HCA1   HCA1   H 0 0 N N N 32.211 2.991  8.405  -0.892 3.527  1.577  HCA1   G48 42 
G48 HCB1   HCB1   H 0 0 N N N 32.876 5.263  7.736  -3.201 4.331  1.701  HCB1   G48 43 
G48 HCB2   HCB2   H 0 0 N N N 32.999 4.723  6.027  -2.694 4.277  -0.005 HCB2   G48 44 
G48 HCD1   HCD1   H 0 0 N N N 36.433 4.613  6.971  -5.539 4.115  1.012  HCD1   G48 45 
G48 HCD2   HCD2   H 0 0 N N N 35.243 5.065  5.704  -5.032 4.061  -0.693 HCD2   G48 46 
G48 HCD3   HCD3   H 0 0 N N N 35.241 5.921  7.283  -5.989 2.727  -0.007 HCD3   G48 47 
G48 HOP2   HOP2   H 0 0 N N N 29.406 -2.537 1.412  7.336  -1.697 -0.850 HOP2   G48 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
G48 OP1   P      DOUB N N 1  
G48 P     "O5'"  SING N N 2  
G48 P     OP3    SING N N 3  
G48 "C5'" "O5'"  SING N N 4  
G48 "C5'" "C4'"  SING N N 5  
G48 "C4'" "O4'"  SING N N 6  
G48 "C4'" "C3'"  SING N N 7  
G48 "O4'" "C1'"  SING N N 8  
G48 "O3'" "C3'"  SING N N 9  
G48 "C3'" "C2'"  SING N N 10 
G48 "C1'" "C2'"  SING N N 11 
G48 "C1'" N9     SING N N 12 
G48 "O2'" "C2'"  SING N N 13 
G48 "O2'" "CA'"  SING N N 14 
G48 "CD'" "OC'"  SING N N 15 
G48 C8    N9     SING Y N 16 
G48 C8    N7     DOUB Y N 17 
G48 "CB'" "OC'"  SING N N 18 
G48 "CB'" "CA'"  SING N N 19 
G48 N9    C4     SING Y N 20 
G48 N7    C5     SING Y N 21 
G48 C4    C5     DOUB Y N 22 
G48 C4    N3     SING N N 23 
G48 C5    C6     SING N N 24 
G48 N3    C2     DOUB N N 25 
G48 C6    O6     DOUB N N 26 
G48 C6    N1     SING N N 27 
G48 C2    N1     SING N N 28 
G48 C2    N2     SING N N 29 
G48 P     OP2    SING N N 30 
G48 OP3   HOP3   SING N N 31 
G48 "C5'" "H5'"  SING N N 32 
G48 "C5'" "H5''" SING N N 33 
G48 "C4'" "H4'"  SING N N 34 
G48 "C3'" "H3'"  SING N N 35 
G48 "O3'" "HO3'" SING N N 36 
G48 "C2'" "H2'"  SING N N 37 
G48 "C1'" "H1'"  SING N N 38 
G48 C8    H8     SING N N 39 
G48 N1    H1     SING N N 40 
G48 N2    H21    SING N N 41 
G48 N2    H22    SING N N 42 
G48 "CA'" HCA2   SING N N 43 
G48 "CA'" HCA1   SING N N 44 
G48 "CB'" HCB1   SING N N 45 
G48 "CB'" HCB2   SING N N 46 
G48 "CD'" HCD1   SING N N 47 
G48 "CD'" HCD2   SING N N 48 
G48 "CD'" HCD3   SING N N 49 
G48 OP2   HOP2   SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
G48 SMILES           ACDLabs              12.01 "O=P(O)(O)OCC3OC(n2cnc1c2N=C(N)NC1=O)C(OCCOC)C3O"                                                                                                                                     
G48 InChI            InChI                1.03  "InChI=1S/C13H20N5O9P/c1-24-2-3-25-9-8(19)6(4-26-28(21,22)23)27-12(9)18-5-15-7-10(18)16-13(14)17-11(7)20/h5-6,8-9,12,19H,2-4H2,1H3,(H2,21,22,23)(H3,14,16,17,20)/t6-,8-,9-,12-/m1/s1" 
G48 InChIKey         InChI                1.03  XPQHQKCWTLHVLZ-WOUKDFQISA-N                                                                                                                                                           
G48 SMILES_CANONICAL CACTVS               3.370 "COCCO[C@@H]1[C@H](O)[C@@H](CO[P](O)(O)=O)O[C@H]1n2cnc3C(=O)NC(=Nc23)N"                                                                                                               
G48 SMILES           CACTVS               3.370 "COCCO[CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1n2cnc3C(=O)NC(=Nc23)N"                                                                                                                     
G48 SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "COCCO[C@@H]1[C@@H]([C@H](O[C@H]1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O"                                                                                                                   
G48 SMILES           "OpenEye OEToolkits" 1.7.6 "COCCOC1C(C(OC1n2cnc3c2N=C(NC3=O)N)COP(=O)(O)O)O"                                                                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
G48 "SYSTEMATIC NAME" ACDLabs              12.01 
;2'-O-(2-methoxyethyl)guanosine 5'-(dihydrogen phosphate)
;
G48 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "[(2R,3R,4R,5R)-5-(2-azanyl-6-oxidanylidene-1H-purin-9-yl)-4-(2-methoxyethoxy)-3-oxidanyl-oxolan-2-yl]methyl dihydrogen phosphate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
G48 "Create component"         1999-05-12 RCSB 
G48 "Modify descriptor"        2011-06-04 RCSB 
G48 "Modify component atom id" 2013-01-10 RCSB 
# 
