data_DJ8
# 
_chem_comp.id                                    DJ8 
_chem_comp.name                                  "1-[(4-chloranyl-2-methyl-phenyl)methyl]-3-(7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.1^{2,6}.0^{17,20}]docosa-1(20),2(22),3,5,14(21),15,18-heptaen-5-yl)urea" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H25 Cl N6 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-15 
_chem_comp.pdbx_modified_date                    2022-08-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        492.957 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DJ8 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QGP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DJ8 N1  N1  N  0 1 N N N -28.320 4.402  11.237 -1.314 0.109  -0.271 N1  DJ8 1  
DJ8 C7  C1  C  0 1 N N N -31.875 5.258  10.950 -4.649 1.471  0.463  C7  DJ8 2  
DJ8 C8  C2  C  0 1 N N N -29.603 4.623  11.670 -2.294 0.935  0.148  C8  DJ8 3  
DJ8 N2  N2  N  0 1 N N N -20.668 1.234  11.257 6.981  -2.053 -0.111 N2  DJ8 4  
DJ8 C9  C3  C  0 1 Y N N -27.245 4.025  12.086 0.023  0.533  -0.234 C9  DJ8 5  
DJ8 O1  O1  O  0 1 N N N -26.642 2.442  10.470 0.734  -1.731 -0.127 O1  DJ8 6  
DJ8 C1  C4  C  0 1 Y N N -32.351 7.737  11.237 -6.483 -0.127 1.052  C1  DJ8 7  
DJ8 C5  C5  C  0 1 Y N N -32.921 6.657  9.151  -6.726 1.221  -0.912 C5  DJ8 8  
DJ8 C6  C6  C  0 1 Y N N -32.396 6.581  10.439 -5.990 0.837  0.194  C6  DJ8 9  
DJ8 N3  N3  N  0 1 Y N N -21.704 2.490  14.935 6.283  1.987  0.047  N3  DJ8 10 
DJ8 C4  C7  C  0 1 Y N N -33.407 7.844  8.644  -7.955 0.641  -1.159 C4  DJ8 11 
DJ8 C3  C8  C  0 1 Y N N -33.374 8.966  9.436  -8.447 -0.329 -0.304 C3  DJ8 12 
DJ8 C2  C9  C  0 1 Y N N -32.847 8.929  10.711 -7.710 -0.713 0.802  C2  DJ8 13 
DJ8 N4  N4  N  0 1 Y N N -22.251 3.048  16.069 5.745  3.279  0.047  N4  DJ8 14 
DJ8 O   O2  O  0 1 N N N -29.976 4.351  12.805 -2.013 2.005  0.652  O   DJ8 15 
DJ8 N   N5  N  0 1 N N N -30.450 5.067  10.708 -3.585 0.574  0.008  N   DJ8 16 
DJ8 CL  CL1 CL 0 0 N N N -34.089 10.444 8.852  -9.991 -1.059 -0.614 CL  DJ8 17 
DJ8 C   C10 C  0 1 N N N -31.787 7.719  12.635 -5.680 -0.545 2.257  C   DJ8 18 
DJ8 C14 C11 C  0 1 Y N N -26.324 3.075  11.638 1.048  -0.410 -0.157 C14 DJ8 19 
DJ8 C13 C12 C  0 1 Y N N -25.183 2.801  12.368 2.365  0.008  -0.108 C13 DJ8 20 
DJ8 C15 C13 C  0 1 N N N -25.757 1.405  9.991  1.683  -2.646 -0.679 C15 DJ8 21 
DJ8 C16 C14 C  0 1 N N N -24.512 1.997  9.373  2.400  -3.367 0.465  C16 DJ8 22 
DJ8 O2  O3  O  0 1 N N N -23.602 0.957  9.004  3.707  -3.755 0.057  O2  DJ8 23 
DJ8 C17 C15 C  0 1 N N N -22.683 0.497  10.013 4.748  -2.864 0.463  C17 DJ8 24 
DJ8 C18 C16 C  0 1 N N N -21.503 1.435  10.076 5.858  -2.894 -0.589 C18 DJ8 25 
DJ8 C19 C17 C  0 1 Y N N -20.978 1.675  12.502 6.724  -0.680 -0.043 C19 DJ8 26 
DJ8 N5  N6  N  0 1 Y N N -22.176 2.237  12.624 5.492  -0.220 -0.105 N5  DJ8 27 
DJ8 C24 C18 C  0 1 Y N N -22.555 2.539  13.874 5.245  1.095  -0.054 C24 DJ8 28 
DJ8 C21 C19 C  0 1 Y N N -20.454 1.971  14.801 7.572  1.537  0.130  C21 DJ8 29 
DJ8 C20 C20 C  0 1 Y N N -20.060 1.533  13.585 7.811  0.208  0.089  C20 DJ8 30 
DJ8 C23 C21 C  0 1 Y N N -23.719 3.174  14.333 4.068  1.849  -0.081 C23 DJ8 31 
DJ8 C22 C22 C  0 1 Y N N -23.454 3.447  15.683 4.442  3.202  -0.024 C22 DJ8 32 
DJ8 C12 C23 C  0 1 Y N N -24.946 3.467  13.564 2.667  1.366  -0.143 C12 DJ8 33 
DJ8 C11 C24 C  0 1 Y N N -25.872 4.397  14.021 1.633  2.305  -0.233 C11 DJ8 34 
DJ8 C10 C25 C  0 1 Y N N -27.017 4.672  13.296 0.321  1.886  -0.276 C10 DJ8 35 
DJ8 H1  H1  H  0 1 N N N -28.129 4.513  10.262 -1.533 -0.778 -0.594 H1  DJ8 36 
DJ8 H2  H2  H  0 1 N N N -32.055 5.207  12.034 -4.581 2.418  -0.073 H2  DJ8 37 
DJ8 H3  H3  H  0 1 N N N -32.426 4.449  10.448 -4.541 1.651  1.533  H3  DJ8 38 
DJ8 H4  H4  H  0 1 N N N -20.557 0.244  11.342 7.837  -2.431 0.143  H4  DJ8 39 
DJ8 H5  H5  H  0 1 N N N -32.948 5.769  8.537  -6.340 1.975  -1.582 H5  DJ8 40 
DJ8 H6  H6  H  0 1 N N N -33.807 7.891  7.642  -8.531 0.941  -2.023 H6  DJ8 41 
DJ8 H7  H7  H  0 1 N N N -32.819 9.830  11.306 -8.093 -1.470 1.470  H7  DJ8 42 
DJ8 H8  H8  H  0 1 N N N -30.084 5.271  9.800  -3.809 -0.280 -0.395 H8  DJ8 43 
DJ8 H9  H9  H  0 1 N N N -30.710 7.939  12.599 -5.945 0.086  3.106  H9  DJ8 44 
DJ8 H10 H10 H  0 1 N N N -32.296 8.479  13.245 -5.898 -1.586 2.496  H10 DJ8 45 
DJ8 H11 H11 H  0 1 N N N -31.944 6.726  13.081 -4.617 -0.436 2.041  H11 DJ8 46 
DJ8 H12 H12 H  0 1 N N N -24.475 2.069  12.009 3.160  -0.720 -0.042 H12 DJ8 47 
DJ8 H13 H13 H  0 1 N N N -26.283 0.804  9.234  1.167  -3.375 -1.304 H13 DJ8 48 
DJ8 H14 H14 H  0 1 N N N -25.468 0.761  10.835 2.409  -2.099 -1.281 H14 DJ8 49 
DJ8 H15 H15 H  0 1 N N N -24.026 2.663  10.101 2.480  -2.698 1.322  H15 DJ8 50 
DJ8 H16 H16 H  0 1 N N N -24.789 2.572  8.477  1.832  -4.253 0.748  H16 DJ8 51 
DJ8 H17 H17 H  0 1 N N N -23.189 0.477  10.989 4.352  -1.852 0.547  H17 DJ8 52 
DJ8 H18 H18 H  0 1 N N N -22.335 -0.515 9.759  5.148  -3.184 1.425  H18 DJ8 53 
DJ8 H19 H19 H  0 1 N N N -20.884 1.278  9.180  5.479  -2.499 -1.532 H19 DJ8 54 
DJ8 H20 H20 H  0 1 N N N -21.879 2.469  10.086 6.201  -3.919 -0.730 H20 DJ8 55 
DJ8 H21 H21 H  0 1 N N N -19.789 1.910  15.650 8.389  2.237  0.226  H21 DJ8 56 
DJ8 H22 H22 H  0 1 N N N -19.085 1.091  13.438 8.821  -0.169 0.156  H22 DJ8 57 
DJ8 H23 H23 H  0 1 N N N -24.159 3.933  16.341 3.763  4.042  -0.038 H23 DJ8 58 
DJ8 H24 H24 H  0 1 N N N -25.695 4.911  14.954 1.864  3.359  -0.270 H24 DJ8 59 
DJ8 H25 H25 H  0 1 N N N -27.734 5.389  13.669 -0.475 2.613  -0.341 H25 DJ8 60 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DJ8 C4  C5  DOUB Y N 1  
DJ8 C4  C3  SING Y N 2  
DJ8 CL  C3  SING N N 3  
DJ8 O2  C16 SING N N 4  
DJ8 O2  C17 SING N N 5  
DJ8 C5  C6  SING Y N 6  
DJ8 C16 C15 SING N N 7  
DJ8 C3  C2  DOUB Y N 8  
DJ8 C15 O1  SING N N 9  
DJ8 C17 C18 SING N N 10 
DJ8 C18 N2  SING N N 11 
DJ8 C6  C7  SING N N 12 
DJ8 C6  C1  DOUB Y N 13 
DJ8 O1  C14 SING N N 14 
DJ8 N   C7  SING N N 15 
DJ8 N   C8  SING N N 16 
DJ8 C2  C1  SING Y N 17 
DJ8 C1  C   SING N N 18 
DJ8 N1  C8  SING N N 19 
DJ8 N1  C9  SING N N 20 
DJ8 N2  C19 SING N N 21 
DJ8 C14 C9  DOUB Y N 22 
DJ8 C14 C13 SING Y N 23 
DJ8 C8  O   DOUB N N 24 
DJ8 C9  C10 SING Y N 25 
DJ8 C13 C12 DOUB Y N 26 
DJ8 C19 N5  DOUB Y N 27 
DJ8 C19 C20 SING Y N 28 
DJ8 N5  C24 SING Y N 29 
DJ8 C10 C11 DOUB Y N 30 
DJ8 C12 C11 SING Y N 31 
DJ8 C12 C23 SING N N 32 
DJ8 C20 C21 DOUB Y N 33 
DJ8 C24 C23 DOUB Y N 34 
DJ8 C24 N3  SING Y N 35 
DJ8 C23 C22 SING Y N 36 
DJ8 C21 N3  SING Y N 37 
DJ8 N3  N4  SING Y N 38 
DJ8 C22 N4  DOUB Y N 39 
DJ8 N1  H1  SING N N 40 
DJ8 C7  H2  SING N N 41 
DJ8 C7  H3  SING N N 42 
DJ8 N2  H4  SING N N 43 
DJ8 C5  H5  SING N N 44 
DJ8 C4  H6  SING N N 45 
DJ8 C2  H7  SING N N 46 
DJ8 N   H8  SING N N 47 
DJ8 C   H9  SING N N 48 
DJ8 C   H10 SING N N 49 
DJ8 C   H11 SING N N 50 
DJ8 C13 H12 SING N N 51 
DJ8 C15 H13 SING N N 52 
DJ8 C15 H14 SING N N 53 
DJ8 C16 H15 SING N N 54 
DJ8 C16 H16 SING N N 55 
DJ8 C17 H17 SING N N 56 
DJ8 C17 H18 SING N N 57 
DJ8 C18 H19 SING N N 58 
DJ8 C18 H20 SING N N 59 
DJ8 C21 H21 SING N N 60 
DJ8 C20 H22 SING N N 61 
DJ8 C22 H23 SING N N 62 
DJ8 C11 H24 SING N N 63 
DJ8 C10 H25 SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DJ8 InChI            InChI                1.06  "InChI=1S/C25H25ClN6O3/c1-16-12-19(26)4-2-18(16)14-28-25(33)30-21-5-3-17-13-22(21)35-11-10-34-9-7-27-23-6-8-32-24(31-23)20(17)15-29-32/h2-6,8,12-13,15H,7,9-11,14H2,1H3,(H,27,31)(H2,28,30,33)" 
DJ8 InChIKey         InChI                1.06  SMEVONJPJBGLLE-UHFFFAOYSA-N                                                                                                                                                                     
DJ8 SMILES_CANONICAL CACTVS               3.385 "Cc1cc(Cl)ccc1CNC(=O)Nc2ccc3cc2OCCOCCNc4ccn5ncc3c5n4"                                                                                                                                           
DJ8 SMILES           CACTVS               3.385 "Cc1cc(Cl)ccc1CNC(=O)Nc2ccc3cc2OCCOCCNc4ccn5ncc3c5n4"                                                                                                                                           
DJ8 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1CNC(=O)Nc2ccc-3cc2OCCOCCNc4ccn5c(c3cn5)n4)Cl"                                                                                                                                        
DJ8 SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1cc(ccc1CNC(=O)Nc2ccc-3cc2OCCOCCNc4ccn5c(c3cn5)n4)Cl"                                                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           DJ8 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "1-[(4-chloranyl-2-methyl-phenyl)methyl]-3-(7,10-dioxa-13,17,18,21-tetrazatetracyclo[12.5.2.1^{2,6}.0^{17,20}]docosa-1(20),2(22),3,5,14(21),15,18-heptaen-5-yl)urea" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DJ8 "Create component"  2021-12-15 PDBE 
DJ8 "Initial release"   2022-01-26 RCSB 
DJ8 "Modify descriptor" 2022-08-22 RCSB 
# 
