data_A88
#

_chem_comp.id                                   A88
_chem_comp.name                                 "(5R,6R)-2,4-BIS-(4-HYDROXY-3-METHOXYBENZYL)-1,5-DIBENZYL-3-OXO-6-HYDROXY-1,2,4-TRIAZACYCLOHEPTANE"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C34 H37 N3 O6"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        A-98881
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    1999-07-07
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       583.674
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    A88
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       ?
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       1PRO
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A88  N1    N1    N  0  1  N  N  N   -8.609  17.479  26.967  -0.325   0.806   0.618  N1    A88   1  
A88  N2    N2    N  0  1  N  N  N   -8.635  16.034  26.795   1.031   0.707   0.639  N2    A88   2  
A88  C3    C3    C  0  1  N  N  N   -8.834  15.139  27.793   1.693  -0.089  -0.219  C3    A88   3  
A88  O3    O3    O  0  1  N  N  N   -8.196  14.058  27.749   2.875   0.134  -0.396  O3    A88   4  
A88  N4    N4    N  0  1  N  N  N   -9.738  15.500  28.737   1.151  -1.095  -0.896  N4    A88   5  
A88  C5    C5    C  0  1  N  N  R  -10.783  16.411  28.690  -0.199  -1.594  -0.631  C5    A88   6  
A88  C6    C6    C  0  1  N  N  R  -10.507  17.943  28.312  -0.428  -1.660   0.885  C6    A88   7  
A88  O6    O6    O  0  1  N  N  N  -11.712  18.578  28.625  -1.433  -2.634   1.174  O6    A88   8  
A88  C7    C7    C  0  1  N  N  N   -9.955  18.217  26.928  -0.882  -0.299   1.377  C7    A88   9  
A88  C8    C8    C  0  1  N  N  N   -7.597  18.011  27.981  -0.669   2.034   1.348  C8    A88  10  
A88  C9    C9    C  0  1  Y  N  N   -6.261  18.014  27.260  -2.133   2.338   1.157  C9    A88  11  
A88  C10   C10   C  0  1  Y  N  N   -5.999  18.999  26.290  -3.055   1.914   2.095  C10   A88  12  
A88  C11   C11   C  0  1  Y  N  N   -4.798  18.968  25.587  -4.398   2.193   1.920  C11   A88  13  
A88  C12   C12   C  0  1  Y  N  N   -3.866  17.965  25.866  -4.818   2.896   0.807  C12   A88  14  
A88  C13   C13   C  0  1  Y  N  N   -4.140  16.995  26.834  -3.896   3.321  -0.130  C13   A88  15  
A88  C14   C14   C  0  1  Y  N  N   -5.330  17.010  27.541  -2.553   3.046   0.046  C14   A88  16  
A88  C15   C15   C  0  1  N  N  N  -11.835  15.724  27.779  -1.225  -0.650  -1.263  C15   A88  17  
A88  C16   C16   C  0  1  Y  N  N  -12.513  14.511  28.440  -2.570  -1.327  -1.306  C16   A88  18  
A88  C17   C17   C  0  1  Y  N  N  -13.515  14.689  29.410  -3.513  -1.053  -0.333  C17   A88  19  
A88  C18   C18   C  0  1  Y  N  N  -14.126  13.570  29.989  -4.748  -1.674  -0.372  C18   A88  20  
A88  C19   C19   C  0  1  Y  N  N  -13.742  12.283  29.609  -5.039  -2.569  -1.384  C19   A88  21  
A88  C20   C20   C  0  1  Y  N  N  -12.748  12.118  28.647  -4.097  -2.843  -2.357  C20   A88  22  
A88  C21   C21   C  0  1  Y  N  N  -12.129  13.220  28.057  -2.864  -2.219  -2.321  C21   A88  23  
A88  C22   C22   C  0  1  N  N  N   -9.508  14.689  30.031   1.941  -1.737  -1.950  C22   A88  24  
A88  C23   C23   C  0  1  Y  N  N   -9.761  15.313  31.393   1.737  -1.001  -3.249  C23   A88  25  
A88  C24   C24   C  0  1  Y  N  N  -10.888  14.957  32.122   2.512   0.103  -3.545  C24   A88  26  
A88  C25   C25   C  0  1  Y  N  N  -11.106  15.550  33.365   2.325   0.781  -4.739  C25   A88  27  
A88  C26   C26   C  0  1  Y  N  N  -10.186  16.464  33.869   1.352   0.349  -5.636  C26   A88  28  
A88  C27   C27   C  0  1  Y  N  N   -9.060  16.830  33.141   0.583  -0.763  -5.336  C27   A88  29  
A88  C28   C28   C  0  1  Y  N  N   -8.854  16.253  31.895   0.774  -1.434  -4.142  C28   A88  30  
A88  O29   O29   O  0  1  N  N  N  -10.386  17.027  35.070   1.165   1.011  -6.809  O29   A88  31  
A88  O30   O30   O  0  1  N  N  N  -12.330  15.289  33.995   3.087   1.869  -5.032  O30   A88  32  
A88  C31   C31   C  0  1  N  N  N  -13.219  14.146  33.846   3.975   2.060  -3.929  C31   A88  33  
A88  C32   C32   C  0  1  N  N  N   -7.903  15.578  25.526   1.791   1.482   1.622  C32   A88  34  
A88  C33   C33   C  0  1  Y  N  N   -8.325  16.126  24.190   2.129   0.605   2.800  C33   A88  35  
A88  C34   C34   C  0  1  Y  N  N   -9.601  15.845  23.679   3.245  -0.209   2.756  C34   A88  36  
A88  C35   C35   C  0  1  Y  N  N   -9.964  16.357  22.435   3.560  -1.015   3.834  C35   A88  37  
A88  C36   C36   C  0  1  Y  N  N   -9.050  17.141  21.725   2.756  -1.007   4.962  C36   A88  38  
A88  C37   C37   C  0  1  Y  N  N   -7.790  17.408  22.246   1.633  -0.186   5.008  C37   A88  39  
A88  C38   C38   C  0  1  Y  N  N   -7.423  16.897  23.470   1.327   0.622   3.926  C38   A88  40  
A88  O39   O39   O  0  1  N  N  N   -9.642  17.479  20.566   3.064  -1.799   6.024  O39   A88  41  
A88  O40   O40   O  0  1  N  N  N   -6.977  18.284  21.532   0.842  -0.175   6.113  O40   A88  42  
A88  C41   C41   C  0  1  N  N  N   -6.275  19.323  22.266  -0.212   0.754   5.857  C41   A88  43  
A88  H5    H5    H  0  1  N  N  N  -11.112  16.601  29.738  -0.309  -2.590  -1.060  H5    A88  44  
A88  H6    H6    H  0  1  N  N  N   -9.648  18.354  28.892   0.501  -1.936   1.382  H6    A88  45  
A88  HO6   HO6   H  0  1  N  N  N  -11.548  19.486  28.400  -1.545  -2.643   2.135  HO6   A88  46  
A88  H71   1H7   H  0  1  N  N  N   -9.894  19.294  26.649  -1.970  -0.251   1.317  H71   A88  47  
A88  H72   2H7   H  0  1  N  N  N  -10.627  17.928  26.086  -0.588  -0.189   2.421  H72   A88  48  
A88  H81   1H8   H  0  1  N  N  N   -7.874  19.000  28.413  -0.462   1.897   2.409  H81   A88  49  
A88  H82   2H8   H  0  1  N  N  N   -7.586  17.445  28.941  -0.073   2.863   0.965  H82   A88  50  
A88  H10   H10   H  0  1  N  N  N   -6.734  19.794  26.081  -2.727   1.364   2.965  H10   A88  51  
A88  H11   H11   H  0  1  N  N  N   -4.587  19.729  24.817  -5.118   1.861   2.653  H11   A88  52  
A88  H12   H12   H  0  1  N  N  N   -2.908  17.938  25.319  -5.867   3.113   0.670  H12   A88  53  
A88  H13   H13   H  0  1  N  N  N   -3.402  16.202  27.044  -4.225   3.871  -1.000  H13   A88  54  
A88  H14   H14   H  0  1  N  N  N   -5.530  16.242  28.307  -1.833   3.378  -0.686  H14   A88  55  
A88  H151  1H15  H  0  0  N  N  N  -12.595  16.459  27.427  -1.295   0.260  -0.668  H151  A88  56  
A88  H152  2H15  H  0  0  N  N  N  -11.385  15.441  26.798  -0.912  -0.399  -2.276  H152  A88  57  
A88  H17   H17   H  0  1  N  N  N  -13.820  15.703  29.715  -3.286  -0.353   0.457  H17   A88  58  
A88  H18   H18   H  0  1  N  N  N  -14.914  13.703  30.748  -5.484  -1.459   0.387  H18   A88  59  
A88  H19   H19   H  0  1  N  N  N  -14.221  11.401  30.066  -6.003  -3.055  -1.414  H19   A88  60  
A88  H20   H20   H  0  1  N  N  N  -12.446  11.099  28.348  -4.324  -3.543  -3.148  H20   A88  61  
A88  H21   H21   H  0  1  N  N  N  -11.344  13.072  27.295  -2.127  -2.433  -3.081  H21   A88  62  
A88  H221  1H22  H  0  0  N  N  N  -10.103  13.748  29.962   1.620  -2.772  -2.064  H221  A88  63  
A88  H222  2H22  H  0  0  N  N  N   -8.463  14.298  30.015   2.996  -1.711  -1.679  H222  A88  64  
A88  H24   H24   H  0  1  N  N  N  -11.598  14.215  31.720   3.263   0.439  -2.846  H24   A88  65  
A88  H27   H27   H  0  1  N  N  N   -8.343  17.564  33.544  -0.169  -1.102  -6.032  H27   A88  66  
A88  H28   H28   H  0  1  N  N  N   -7.969  16.541  31.303   0.171  -2.298  -3.908  H28   A88  67  
A88  HO9   HO9   H  0  1  N  N  N   -9.757  17.651  35.414   0.499   1.691  -6.643  HO9   A88  68  
A88  H311  1H31  H  0  0  N  N  N  -14.193  13.938  34.347   4.610   2.925  -4.119  H311  A88  69  
A88  H312  2H31  H  0  0  N  N  N  -13.430  14.078  32.753   3.396   2.226  -3.021  H312  A88  70  
A88  H313  3H31  H  0  0  N  N  N  -12.585  13.252  34.052   4.597   1.173  -3.806  H313  A88  71  
A88  H321  1H32  H  0  0  N  N  N   -6.811  15.764  25.658   2.711   1.847   1.165  H321  A88  72  
A88  H322  2H32  H  0  0  N  N  N   -7.932  14.464  25.479   1.192   2.328   1.959  H322  A88  73  
A88  H34   H34   H  0  1  N  N  N  -10.313  15.226  24.250   3.872  -0.216   1.876  H34   A88  74  
A88  H35   H35   H  0  1  N  N  N  -10.962  16.144  22.017   4.431  -1.652   3.796  H35   A88  75  
A88  H38   H38   H  0  1  N  N  N   -6.416  17.103  23.869   0.456   1.260   3.958  H38   A88  76  
A88  HO3   HO3   H  0  1  N  N  N   -9.020  18.011  20.083   3.640  -1.281   6.602  HO3   A88  77  
A88  H411  1H41  H  0  0  N  N  N   -5.623  20.024  21.694  -0.876   0.797   6.720  H411  A88  78  
A88  H412  2H41  H  0  0  N  N  N   -7.013  19.912  22.858   0.210   1.741   5.673  H412  A88  79  
A88  H413  3H41  H  0  0  N  N  N   -5.676  18.852  23.080  -0.775   0.431   4.981  H413  A88  80  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A88  N1   N2    SING  N  N   1  
A88  N1   C7    SING  N  N   2  
A88  N1   C8    SING  N  N   3  
A88  N2   C3    SING  N  N   4  
A88  N2   C32   SING  N  N   5  
A88  C3   O3    DOUB  N  N   6  
A88  C3   N4    SING  N  N   7  
A88  N4   C5    SING  N  N   8  
A88  N4   C22   SING  N  N   9  
A88  C5   C6    SING  N  N  10  
A88  C5   C15   SING  N  N  11  
A88  C5   H5    SING  N  N  12  
A88  C6   O6    SING  N  N  13  
A88  C6   C7    SING  N  N  14  
A88  C6   H6    SING  N  N  15  
A88  O6   HO6   SING  N  N  16  
A88  C7   H71   SING  N  N  17  
A88  C7   H72   SING  N  N  18  
A88  C8   C9    SING  N  N  19  
A88  C8   H81   SING  N  N  20  
A88  C8   H82   SING  N  N  21  
A88  C9   C10   DOUB  Y  N  22  
A88  C9   C14   SING  Y  N  23  
A88  C10  C11   SING  Y  N  24  
A88  C10  H10   SING  N  N  25  
A88  C11  C12   DOUB  Y  N  26  
A88  C11  H11   SING  N  N  27  
A88  C12  C13   SING  Y  N  28  
A88  C12  H12   SING  N  N  29  
A88  C13  C14   DOUB  Y  N  30  
A88  C13  H13   SING  N  N  31  
A88  C14  H14   SING  N  N  32  
A88  C15  C16   SING  N  N  33  
A88  C15  H151  SING  N  N  34  
A88  C15  H152  SING  N  N  35  
A88  C16  C17   DOUB  Y  N  36  
A88  C16  C21   SING  Y  N  37  
A88  C17  C18   SING  Y  N  38  
A88  C17  H17   SING  N  N  39  
A88  C18  C19   DOUB  Y  N  40  
A88  C18  H18   SING  N  N  41  
A88  C19  C20   SING  Y  N  42  
A88  C19  H19   SING  N  N  43  
A88  C20  C21   DOUB  Y  N  44  
A88  C20  H20   SING  N  N  45  
A88  C21  H21   SING  N  N  46  
A88  C22  C23   SING  N  N  47  
A88  C22  H221  SING  N  N  48  
A88  C22  H222  SING  N  N  49  
A88  C23  C24   DOUB  Y  N  50  
A88  C23  C28   SING  Y  N  51  
A88  C24  C25   SING  Y  N  52  
A88  C24  H24   SING  N  N  53  
A88  C25  C26   DOUB  Y  N  54  
A88  C25  O30   SING  N  N  55  
A88  C26  C27   SING  Y  N  56  
A88  C26  O29   SING  N  N  57  
A88  C27  C28   DOUB  Y  N  58  
A88  C27  H27   SING  N  N  59  
A88  C28  H28   SING  N  N  60  
A88  O29  HO9   SING  N  N  61  
A88  O30  C31   SING  N  N  62  
A88  C31  H311  SING  N  N  63  
A88  C31  H312  SING  N  N  64  
A88  C31  H313  SING  N  N  65  
A88  C32  C33   SING  N  N  66  
A88  C32  H321  SING  N  N  67  
A88  C32  H322  SING  N  N  68  
A88  C33  C34   DOUB  Y  N  69  
A88  C33  C38   SING  Y  N  70  
A88  C34  C35   SING  Y  N  71  
A88  C34  H34   SING  N  N  72  
A88  C35  C36   DOUB  Y  N  73  
A88  C35  H35   SING  N  N  74  
A88  C36  C37   SING  Y  N  75  
A88  C36  O39   SING  N  N  76  
A88  C37  C38   DOUB  Y  N  77  
A88  C37  O40   SING  N  N  78  
A88  C38  H38   SING  N  N  79  
A88  O39  HO3   SING  N  N  80  
A88  O40  C41   SING  N  N  81  
A88  C41  H411  SING  N  N  82  
A88  C41  H412  SING  N  N  83  
A88  C41  H413  SING  N  N  84  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A88  SMILES            ACDLabs               10.04  "O=C1N(C(C(O)CN(N1Cc2ccc(O)c(OC)c2)Cc3ccccc3)Cc4ccccc4)Cc5ccc(O)c(OC)c5"  
A88  SMILES_CANONICAL  CACTVS                3.341  "COc1cc(CN2[C@H](Cc3ccccc3)[C@H](O)CN(Cc4ccccc4)N(Cc5ccc(O)c(OC)c5)C2=O)ccc1O"  
A88  SMILES            CACTVS                3.341  "COc1cc(CN2[CH](Cc3ccccc3)[CH](O)CN(Cc4ccccc4)N(Cc5ccc(O)c(OC)c5)C2=O)ccc1O"  
A88  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "COc1cc(ccc1O)CN2[C@@H]([C@@H](C[N@](N(C2=O)Cc3ccc(c(c3)OC)O)Cc4ccccc4)O)Cc5ccccc5"  
A88  SMILES            "OpenEye OEToolkits"  1.5.0  "COc1cc(ccc1O)CN2C(C(CN(N(C2=O)Cc3ccc(c(c3)OC)O)Cc4ccccc4)O)Cc5ccccc5"  
A88  InChI             InChI                 1.03   "InChI=1S/C34H37N3O6/c1-42-32-18-26(13-15-29(32)38)21-36-28(17-24-9-5-3-6-10-24)31(40)23-35(20-25-11-7-4-8-12-25)37(34(36)41)22-27-14-16-30(39)33(19-27)43-2/h3-16,18-19,28,31,38-40H,17,20-23H2,1-2H3/t28-,31-/m1/s1"  
A88  InChIKey          InChI                 1.03   PMBZSBGCSQGJAQ-GRKNLSHJSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A88  "SYSTEMATIC NAME"  ACDLabs               10.04  "(5R,6R)-1,5-dibenzyl-6-hydroxy-2,4-bis(4-hydroxy-3-methoxybenzyl)-1,2,4-triazepan-3-one"  
A88  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "(1R,5R,6R)-6-hydroxy-2,4-bis[(4-hydroxy-3-methoxy-phenyl)methyl]-1,5-bis(phenylmethyl)-1,2,4-triazepan-3-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A88  "Create component"   1999-07-07  RCSB  
A88  "Modify descriptor"  2011-06-04  RCSB  
A88  "Modify synonyms"    2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     A88
_pdbx_chem_comp_synonyms.name        A-98881
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
