data_YD7
#

_chem_comp.id                                   YD7
_chem_comp.name                                 "~{N}-[(5~{R})-2-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]-6,7,8,9-tetrahydro-5~{H}-benzo[7]annulen-5-yl]-3-propan-2-yloxy-azetidine-1-carboxamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H33 N7 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-02-22
_chem_comp.pdbx_modified_date                   2022-01-07
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       475.586
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YD7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LTY
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YD7  N1   N1   N  0  1  N  N  N  12.491   9.751  50.894   3.650  -1.789  -0.311  N1   YD7   1  
YD7  N3   N2   N  0  1  Y  N  N  15.747   6.087  56.410  -3.216  -0.370  -0.027  N3   YD7   2  
YD7  C4   C1   C  0  1  N  N  N  14.139  13.073  46.148   6.380   4.067  -0.137  C4   YD7   3  
YD7  C5   C2   C  0  1  N  N  N  15.523  13.550  46.467   6.065   5.018   1.019  C5   YD7   4  
YD7  C6   C3   C  0  1  N  N  N  13.724  13.428  44.753   7.627   4.557  -0.876  C6   YD7   5  
YD7  C7   C4   C  0  1  N  N  N  13.897   9.457  47.449   5.477   0.910   1.600  C7   YD7   6  
YD7  C8   C5   C  0  1  N  N  R  11.932   9.040  52.045   2.785  -2.965  -0.184  C8   YD7   7  
YD7  C10  C6   C  0  1  N  N  N  10.131   9.478  53.858   2.983  -2.870  -2.685  C10  YD7   8  
YD7  C13  C7   C  0  1  Y  N  N  12.651   7.424  53.866   0.788  -1.567  -0.747  C13  YD7   9  
YD7  C15  C8   C  0  1  Y  N  N  14.365   8.458  52.527   0.633  -3.094   1.090  C15  YD7  10  
YD7  C17  C9   C  0  1  Y  N  N  15.001   6.926  54.289  -1.252  -1.726   0.504  C17  YD7  11  
YD7  C20  C10  C  0  1  Y  N  N  15.219   5.756  59.259  -6.348   1.403  -0.424  C20  YD7  12  
YD7  C21  C11  C  0  1  Y  N  N  14.082   6.351  58.751  -7.016   2.333  -1.154  C21  YD7  13  
YD7  C22  C12  C  0  1  N  N  N  11.881   7.057  59.783  -9.325   3.333  -1.112  C22  YD7  14  
YD7  C24  C13  C  0  1  Y  N  N  18.189   5.377  55.524  -4.699  -1.428   1.969  C24  YD7  15  
YD7  C26  C14  C  0  1  Y  N  N  13.646   6.761  54.578  -0.515  -1.159  -0.534  C26  YD7  16  
YD7  C1   C15  C  0  1  N  N  N  12.833   9.129  49.749   4.053  -1.128   0.792  C1   YD7  17  
YD7  C11  C16  C  0  1  N  N  N  10.546   8.430  54.886   1.774  -2.000  -2.970  C11  YD7  18  
YD7  C12  C17  C  0  1  N  N  N  11.195   7.210  54.244   1.587  -0.948  -1.875  C12  YD7  19  
YD7  C14  C18  C  0  1  Y  N  N  13.010   8.292  52.817   1.356  -2.524   0.056  C14  YD7  20  
YD7  C16  C19  C  0  1  Y  N  N  15.349   7.782  53.243  -0.670  -2.697   1.316  C16  YD7  21  
YD7  C18  C20  C  0  1  Y  N  N  16.044   6.256  55.112  -2.651  -1.297   0.744  C18  YD7  22  
YD7  C19  C21  C  0  1  Y  N  N  16.686   5.563  57.217  -4.464   0.014   0.186  C19  YD7  23  
YD7  C2   C22  C  0  1  N  N  N  13.541  11.345  48.652   5.467   0.700  -0.430  C2   YD7  24  
YD7  C23  C23  C  0  1  Y  N  N  14.956   5.569  60.614  -7.216   0.933   0.572  C23  YD7  25  
YD7  C25  C24  C  0  1  Y  N  N  17.292   5.916  54.619  -3.398  -1.860   1.783  C25  YD7  26  
YD7  C3   C25  C  0  1  N  N  N  14.375  10.966  47.380   5.443   1.945   0.467  C3   YD7  27  
YD7  C9   C26  C  0  1  N  N  N  11.229  10.052  52.962   2.830  -3.778  -1.480  C9   YD7  28  
YD7  N2   N3   N  0  1  N  N  N  13.354   9.890  48.743   4.848  -0.045   0.676  N2   YD7  29  
YD7  N4   N4   N  0  1  N  N  N  16.389   5.383  58.561  -5.021   0.981  -0.634  N4   YD7  30  
YD7  N5   N5   N  0  1  Y  N  N  13.224   6.484  59.791  -8.265   2.443  -0.631  N5   YD7  31  
YD7  N6   N6   N  0  1  Y  N  N  13.751   5.999  60.953  -8.361   1.555   0.447  N6   YD7  32  
YD7  N7   N7   N  0  1  Y  N  N  17.913   5.197  56.811  -5.195  -0.502   1.163  N7   YD7  33  
YD7  O1   O1   O  0  1  N  N  N  12.721   7.904  49.612   3.699  -1.507   1.892  O1   YD7  34  
YD7  O2   O2   O  0  1  N  N  N  14.094  11.633  46.191   6.617   2.755   0.377  O2   YD7  35  
YD7  H1   H1   H  0  1  N  N  N  12.625  10.740  50.960   3.935  -1.489  -1.188  H1   YD7  36  
YD7  H2   H2   H  0  1  N  N  N  13.425  13.502  46.867   5.536   4.040  -0.826  H2   YD7  37  
YD7  H3   H3   H  0  1  N  N  N  15.781  13.266  47.498   5.177   4.669   1.545  H3   YD7  38  
YD7  H4   H4   H  0  1  N  N  N  16.239  13.090  45.770   6.909   5.045   1.708  H4   YD7  39  
YD7  H5   H5   H  0  1  N  N  N  15.566  14.645  46.366   5.885   6.019   0.627  H5   YD7  40  
YD7  H6   H6   H  0  1  N  N  N  13.732  14.522  44.635   7.851   3.880  -1.700  H6   YD7  41  
YD7  H7   H7   H  0  1  N  N  N  14.425  12.977  44.036   7.446   5.558  -1.268  H7   YD7  42  
YD7  H8   H8   H  0  1  N  N  N  12.710  13.046  44.564   8.471   4.584  -0.187  H8   YD7  43  
YD7  H9   H9   H  0  1  N  N  N  13.154   9.157  46.696   6.486   0.626   1.898  H9   YD7  44  
YD7  H10  H10  H  0  1  N  N  N  14.698   8.704  47.495   4.846   1.173   2.449  H10  YD7  45  
YD7  H11  H11  H  0  1  N  N  N  11.185   8.313  51.695   3.124  -3.580   0.649  H11  YD7  46  
YD7  H12  H12  H  0  1  N  N  N   9.678  10.318  54.406   3.179  -3.488  -3.561  H12  YD7  47  
YD7  H13  H13  H  0  1  N  N  N   9.376   9.018  53.203   3.844  -2.223  -2.523  H13  YD7  48  
YD7  H14  H14  H  0  1  N  N  N  14.657   9.126  51.730   1.088  -3.846   1.718  H14  YD7  49  
YD7  H15  H15  H  0  1  N  N  N  13.910   6.651  57.728  -6.625   2.885  -1.995  H15  YD7  50  
YD7  H16  H16  H  0  1  N  N  N  11.456   7.010  60.796  -9.919   2.818  -1.867  H16  YD7  51  
YD7  H17  H17  H  0  1  N  N  N  11.932   8.106  59.455  -9.966   3.618  -0.278  H17  YD7  52  
YD7  H18  H18  H  0  1  N  N  N  11.243   6.487  59.091  -8.879   4.227  -1.549  H18  YD7  53  
YD7  H19  H19  H  0  1  N  N  N  19.166   5.087  55.165  -5.304  -1.842   2.762  H19  YD7  54  
YD7  H20  H20  H  0  1  N  N  N  13.360   6.097  55.380  -0.959  -0.405  -1.168  H20  YD7  55  
YD7  H21  H21  H  0  1  N  N  N  11.264   8.885  55.584   1.912  -1.500  -3.929  H21  YD7  56  
YD7  H22  H22  H  0  1  N  N  N   9.652   8.105  55.439   0.884  -2.628  -3.019  H22  YD7  57  
YD7  H23  H23  H  0  1  N  N  N  10.633   6.956  53.333   1.047  -0.091  -2.279  H23  YD7  58  
YD7  H24  H24  H  0  1  N  N  N  11.140   6.372  54.955   2.560  -0.629  -1.503  H24  YD7  59  
YD7  H25  H25  H  0  1  N  N  N  16.389   7.921  52.987  -1.237  -3.140   2.122  H25  YD7  60  
YD7  H26  H26  H  0  1  N  N  N  14.110  11.804  49.474   4.826   0.785  -1.308  H26  YD7  61  
YD7  H27  H27  H  0  1  N  N  N  12.629  11.931  48.465   6.473   0.359  -0.674  H27  YD7  62  
YD7  H28  H28  H  0  1  N  N  N  15.654   5.125  61.308  -6.981   0.185   1.314  H28  YD7  63  
YD7  H29  H29  H  0  1  N  N  N  17.552   6.064  53.581  -2.969  -2.614   2.426  H29  YD7  64  
YD7  H30  H30  H  0  1  N  N  N  15.446  11.011  47.626   4.517   2.517   0.412  H30  YD7  65  
YD7  H31  H31  H  0  1  N  N  N  11.991  10.508  53.611   3.675  -4.467  -1.442  H31  YD7  66  
YD7  H32  H32  H  0  1  N  N  N  10.777  10.828  52.327   1.907  -4.350  -1.577  H32  YD7  67  
YD7  H33  H33  H  0  1  N  N  N  17.095   4.931  59.106  -4.497   1.367  -1.354  H33  YD7  68  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YD7  C6   C4   SING  N  N   1  
YD7  C4   O2   SING  N  N   2  
YD7  C4   C5   SING  N  N   3  
YD7  O2   C3   SING  N  N   4  
YD7  C3   C7   SING  N  N   5  
YD7  C3   C2   SING  N  N   6  
YD7  C7   N2   SING  N  N   7  
YD7  C2   N2   SING  N  N   8  
YD7  N2   C1   SING  N  N   9  
YD7  O1   C1   DOUB  N  N  10  
YD7  C1   N1   SING  N  N  11  
YD7  N1   C8   SING  N  N  12  
YD7  C8   C14  SING  N  N  13  
YD7  C8   C9   SING  N  N  14  
YD7  C15  C14  DOUB  Y  N  15  
YD7  C15  C16  SING  Y  N  16  
YD7  C14  C13  SING  Y  N  17  
YD7  C9   C10  SING  N  N  18  
YD7  C16  C17  DOUB  Y  N  19  
YD7  C10  C11  SING  N  N  20  
YD7  C13  C12  SING  N  N  21  
YD7  C13  C26  DOUB  Y  N  22  
YD7  C12  C11  SING  N  N  23  
YD7  C17  C26  SING  Y  N  24  
YD7  C17  C18  SING  N  N  25  
YD7  C25  C18  DOUB  Y  N  26  
YD7  C25  C24  SING  Y  N  27  
YD7  C18  N3   SING  Y  N  28  
YD7  C24  N7   DOUB  Y  N  29  
YD7  N3   C19  DOUB  Y  N  30  
YD7  N7   C19  SING  Y  N  31  
YD7  C19  N4   SING  N  N  32  
YD7  N4   C20  SING  N  N  33  
YD7  C21  C20  DOUB  Y  N  34  
YD7  C21  N5   SING  Y  N  35  
YD7  C20  C23  SING  Y  N  36  
YD7  C22  N5   SING  N  N  37  
YD7  N5   N6   SING  Y  N  38  
YD7  C23  N6   DOUB  Y  N  39  
YD7  N1   H1   SING  N  N  40  
YD7  C4   H2   SING  N  N  41  
YD7  C5   H3   SING  N  N  42  
YD7  C5   H4   SING  N  N  43  
YD7  C5   H5   SING  N  N  44  
YD7  C6   H6   SING  N  N  45  
YD7  C6   H7   SING  N  N  46  
YD7  C6   H8   SING  N  N  47  
YD7  C7   H9   SING  N  N  48  
YD7  C7   H10  SING  N  N  49  
YD7  C8   H11  SING  N  N  50  
YD7  C10  H12  SING  N  N  51  
YD7  C10  H13  SING  N  N  52  
YD7  C15  H14  SING  N  N  53  
YD7  C21  H15  SING  N  N  54  
YD7  C22  H16  SING  N  N  55  
YD7  C22  H17  SING  N  N  56  
YD7  C22  H18  SING  N  N  57  
YD7  C24  H19  SING  N  N  58  
YD7  C26  H20  SING  N  N  59  
YD7  C11  H21  SING  N  N  60  
YD7  C11  H22  SING  N  N  61  
YD7  C12  H23  SING  N  N  62  
YD7  C12  H24  SING  N  N  63  
YD7  C16  H25  SING  N  N  64  
YD7  C2   H26  SING  N  N  65  
YD7  C2   H27  SING  N  N  66  
YD7  C23  H28  SING  N  N  67  
YD7  C25  H29  SING  N  N  68  
YD7  C3   H30  SING  N  N  69  
YD7  C9   H31  SING  N  N  70  
YD7  C9   H32  SING  N  N  71  
YD7  N4   H33  SING  N  N  72  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YD7  InChI             InChI                 1.03   "InChI=1S/C26H33N7O2/c1-17(2)35-21-15-33(16-21)26(34)31-24-7-5-4-6-18-12-19(8-9-22(18)24)23-10-11-27-25(30-23)29-20-13-28-32(3)14-20/h8-14,17,21,24H,4-7,15-16H2,1-3H3,(H,31,34)(H,27,29,30)/t24-/m1/s1"  
YD7  InChIKey          InChI                 1.03   HYNHKNQQFCVJGQ-XMMPIXPASA-N  
YD7  SMILES_CANONICAL  CACTVS                3.385  "CC(C)OC1CN(C1)C(=O)N[C@@H]2CCCCc3cc(ccc23)c4ccnc(Nc5cnn(C)c5)n4"  
YD7  SMILES            CACTVS                3.385  "CC(C)OC1CN(C1)C(=O)N[CH]2CCCCc3cc(ccc23)c4ccnc(Nc5cnn(C)c5)n4"  
YD7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)OC1CN(C1)C(=O)N[C@@H]2CCCCc3c2ccc(c3)c4ccnc(n4)Nc5cnn(c5)C"  
YD7  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)OC1CN(C1)C(=O)NC2CCCCc3c2ccc(c3)c4ccnc(n4)Nc5cnn(c5)C"  
#
_pdbx_chem_comp_identifier.comp_id          YD7
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[(5~{R})-2-[2-[(1-methylpyrazol-4-yl)amino]pyrimidin-4-yl]-6,7,8,9-tetrahydro-5~{H}-benzo[7]annulen-5-yl]-3-propan-2-yloxy-azetidine-1-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YD7  "Create component"  2021-02-22  RCSB  
YD7  "Initial release"   2022-01-12  RCSB  
##
