data_XO7
# 
_chem_comp.id                                    XO7 
_chem_comp.name                                  "(5S)-4-({1-[(4-bromophenyl)methyl]-1H-imidazol-5-yl}methyl)-5-propyl-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H26 Br F3 N4 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2020-12-22 
_chem_comp.pdbx_modified_date                    2022-11-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        551.399 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XO7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7L42 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XO7 C10  C1  C  0 1 Y N N 31.515 -40.378 -5.998 5.021  2.105  0.221  C10  XO7 1  
XO7 C13  C2  C  0 1 N N N 29.876 -37.137 -6.654 7.669  1.599  0.040  C13  XO7 2  
XO7 C17  C3  C  0 1 Y N N 32.390 -38.141 -5.768 4.486  -0.192 -0.230 C17  XO7 3  
XO7 C20  C4  C  0 1 N N N 36.677 -36.671 -3.744 1.120  -3.010 0.487  C20  XO7 4  
XO7 C22  C5  C  0 1 N N N 37.762 -34.939 -4.564 -0.862 -1.694 0.030  C22  XO7 5  
XO7 C24  C6  C  0 1 Y N N 37.730 -33.004 -6.354 -2.076 -3.651 1.126  C24  XO7 6  
XO7 C26  C7  C  0 1 Y N N 36.679 -31.484 -5.250 -3.086 -2.670 2.762  C26  XO7 7  
XO7 C28  C8  C  0 1 N N N 36.270 -32.640 -3.099 -2.331 -0.296 2.423  C28  XO7 8  
XO7 C01  C9  C  0 1 N N N 38.309 -38.351 -8.644 -1.926 -3.376 -4.313 C01  XO7 9  
XO7 C02  C10 C  0 1 N N N 37.145 -38.049 -7.663 -0.947 -3.478 -3.142 C02  XO7 10 
XO7 C03  C11 C  0 1 N N N 37.584 -37.241 -6.440 -0.371 -2.093 -2.837 C03  XO7 11 
XO7 C04  C12 C  0 1 N N S 36.483 -36.135 -5.996 0.699  -2.214 -1.750 C04  XO7 12 
XO7 C05  C13 C  0 1 N N N 35.101 -36.667 -6.120 1.329  -0.847 -1.499 C05  XO7 13 
XO7 C07  C14 C  0 1 Y N N 33.628 -38.654 -5.437 3.135  0.106  -0.130 C07  XO7 14 
XO7 C08  C15 C  0 1 Y N N 33.819 -40.047 -5.392 2.731  1.406  0.151  C08  XO7 15 
XO7 C09  C16 C  0 1 Y N N 32.747 -40.899 -5.669 3.674  2.401  0.320  C09  XO7 16 
XO7 C11  C17 C  0 1 Y N N 31.318 -38.984 -6.054 5.429  0.808  -0.055 C11  XO7 17 
XO7 C18  C18 C  0 1 N N N 35.514 -37.766 -3.903 2.086  -1.866 0.607  C18  XO7 18 
XO7 C23  C19 C  0 1 Y N N 37.425 -33.524 -5.091 -1.753 -2.345 1.056  C23  XO7 19 
XO7 C29  C20 C  0 1 Y N N 35.061 -33.556 -3.041 -3.371 0.444  1.622  C29  XO7 20 
XO7 C30  C21 C  0 1 Y N N 34.914 -34.355 -1.897 -4.643 0.618  2.135  C30  XO7 21 
XO7 C31  C22 C  0 1 Y N N 33.828 -35.209 -1.789 -5.597 1.297  1.401  C31  XO7 22 
XO7 C32  C23 C  0 1 Y N N 32.878 -35.261 -2.825 -5.279 1.803  0.153  C32  XO7 23 
XO7 C34  C24 C  0 1 Y N N 33.013 -34.469 -3.979 -4.006 1.630  -0.359 C34  XO7 24 
XO7 C35  C25 C  0 1 Y N N 34.113 -33.604 -4.093 -3.051 0.955  0.378  C35  XO7 25 
XO7 F14  F1  F  0 1 N N N 30.682 -36.753 -7.693 8.980  1.128  -0.094 F14  XO7 26 
XO7 F15  F2  F  0 1 N N N 30.130 -36.378 -5.561 7.496  2.136  1.320  F15  XO7 27 
XO7 F16  F3  F  0 1 N N N 28.587 -36.930 -7.036 7.430  2.590  -0.918 F16  XO7 28 
XO7 N06  N1  N  0 1 N N N 34.735 -37.713 -5.150 2.180  -0.900 -0.313 N06  XO7 29 
XO7 N21  N2  N  0 1 N N N 36.714 -35.703 -4.680 0.081  -2.687 -0.500 N21  XO7 30 
XO7 N25  N3  N  0 1 Y N N 37.264 -31.763 -6.400 -2.891 -3.820 2.178  N25  XO7 31 
XO7 N27  N4  N  0 1 Y N N 36.775 -32.561 -4.457 -2.389 -1.724 2.097  N27  XO7 32 
XO7 O12  O1  O  0 1 N N N 30.050 -38.494 -6.388 6.754  0.519  -0.152 O12  XO7 33 
XO7 O19  O2  O  0 1 N N N 35.300 -38.560 -3.075 2.810  -1.816 1.578  O19  XO7 34 
XO7 BR33 BR1 BR 0 0 N N N 31.386 -36.463 -2.584 -6.584 2.733  -0.852 BR33 XO7 35 
XO7 H1   H1  H  0 1 N N N 30.693 -41.044 -6.215 5.755  2.886  0.353  H1   XO7 36 
XO7 H2   H2  H  0 1 N N N 32.250 -37.071 -5.806 4.802  -1.202 -0.449 H2   XO7 37 
XO7 H3   H3  H  0 1 N N N 37.641 -37.200 -3.769 1.656  -3.905 0.169  H3   XO7 38 
XO7 H4   H4  H  0 1 N N N 36.550 -36.186 -2.765 0.654  -3.194 1.456  H4   XO7 39 
XO7 H5   H5  H  0 1 N N N 38.591 -35.361 -5.150 -1.472 -1.301 -0.784 H5   XO7 40 
XO7 H6   H6  H  0 1 N N N 38.056 -34.877 -3.506 -0.308 -0.879 0.495  H6   XO7 41 
XO7 H7   H7  H  0 1 N N N 38.250 -33.520 -7.147 -1.742 -4.424 0.451  H7   XO7 42 
XO7 H8   H8  H  0 1 N N N 36.204 -30.549 -4.992 -3.697 -2.503 3.637  H8   XO7 43 
XO7 H9   H9  H  0 1 N N N 37.058 -33.036 -2.441 -1.342 0.092  2.181  H9   XO7 44 
XO7 H10  H10 H  0 1 N N N 35.980 -31.634 -2.760 -2.526 -0.158 3.487  H10  XO7 45 
XO7 H11  H11 H  0 1 N N N 37.929 -38.932 -9.497 -2.736 -2.695 -4.052 H11  XO7 46 
XO7 H12  H12 H  0 1 N N N 38.738 -37.405 -9.006 -1.403 -2.998 -5.192 H12  XO7 47 
XO7 H13  H13 H  0 1 N N N 39.086 -38.930 -8.124 -2.336 -4.362 -4.531 H13  XO7 48 
XO7 H14  H14 H  0 1 N N N 36.373 -37.479 -8.201 -1.470 -3.855 -2.263 H14  XO7 49 
XO7 H15  H15 H  0 1 N N N 36.722 -39.004 -7.318 -0.137 -4.158 -3.404 H15  XO7 50 
XO7 H16  H16 H  0 1 N N N 37.747 -37.933 -5.600 0.075  -1.678 -3.741 H16  XO7 51 
XO7 H17  H17 H  0 1 N N N 38.526 -36.725 -6.678 -1.169 -1.436 -2.490 H17  XO7 52 
XO7 H18  H18 H  0 1 N N N 36.591 -35.285 -6.686 1.466  -2.920 -2.069 H18  XO7 53 
XO7 H19  H19 H  0 1 N N N 34.402 -35.827 -5.993 1.932  -0.563 -2.361 H19  XO7 54 
XO7 H20  H20 H  0 1 N N N 34.989 -37.088 -7.130 0.543  -0.108 -1.350 H20  XO7 55 
XO7 H21  H21 H  0 1 N N N 34.788 -40.455 -5.145 1.680  1.640  0.229  H21  XO7 56 
XO7 H22  H22 H  0 1 N N N 32.885 -41.969 -5.625 3.359  3.412  0.530  H22  XO7 57 
XO7 H23  H23 H  0 1 N N N 35.645 -34.305 -1.103 -4.892 0.222  3.108  H23  XO7 58 
XO7 H24  H24 H  0 1 N N N 33.712 -35.831 -0.914 -6.591 1.432  1.801  H24  XO7 59 
XO7 H25  H25 H  0 1 N N N 32.279 -34.525 -4.769 -3.757 2.024  -1.333 H25  XO7 60 
XO7 H26  H26 H  0 1 N N N 34.235 -32.985 -4.969 -2.057 0.819  -0.022 H26  XO7 61 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XO7 C01 C02  SING N N 1  
XO7 F14 C13  SING N N 2  
XO7 C02 C03  SING N N 3  
XO7 F16 C13  SING N N 4  
XO7 C13 O12  SING N N 5  
XO7 C13 F15  SING N N 6  
XO7 C03 C04  SING N N 7  
XO7 N25 C24  SING Y N 8  
XO7 N25 C26  DOUB Y N 9  
XO7 O12 C11  SING N N 10 
XO7 C24 C23  DOUB Y N 11 
XO7 C05 C04  SING N N 12 
XO7 C05 N06  SING N N 13 
XO7 C11 C10  DOUB Y N 14 
XO7 C11 C17  SING Y N 15 
XO7 C10 C09  SING Y N 16 
XO7 C04 N21  SING N N 17 
XO7 C17 C07  DOUB Y N 18 
XO7 C09 C08  DOUB Y N 19 
XO7 C07 C08  SING Y N 20 
XO7 C07 N06  SING N N 21 
XO7 C26 N27  SING Y N 22 
XO7 N06 C18  SING N N 23 
XO7 C23 C22  SING N N 24 
XO7 C23 N27  SING Y N 25 
XO7 N21 C22  SING N N 26 
XO7 N21 C20  SING N N 27 
XO7 N27 C28  SING N N 28 
XO7 C35 C34  DOUB Y N 29 
XO7 C35 C29  SING Y N 30 
XO7 C34 C32  SING Y N 31 
XO7 C18 C20  SING N N 32 
XO7 C18 O19  DOUB N N 33 
XO7 C28 C29  SING N N 34 
XO7 C29 C30  DOUB Y N 35 
XO7 C32 BR33 SING N N 36 
XO7 C32 C31  DOUB Y N 37 
XO7 C30 C31  SING Y N 38 
XO7 C10 H1   SING N N 39 
XO7 C17 H2   SING N N 40 
XO7 C20 H3   SING N N 41 
XO7 C20 H4   SING N N 42 
XO7 C22 H5   SING N N 43 
XO7 C22 H6   SING N N 44 
XO7 C24 H7   SING N N 45 
XO7 C26 H8   SING N N 46 
XO7 C28 H9   SING N N 47 
XO7 C28 H10  SING N N 48 
XO7 C01 H11  SING N N 49 
XO7 C01 H12  SING N N 50 
XO7 C01 H13  SING N N 51 
XO7 C02 H14  SING N N 52 
XO7 C02 H15  SING N N 53 
XO7 C03 H16  SING N N 54 
XO7 C03 H17  SING N N 55 
XO7 C04 H18  SING N N 56 
XO7 C05 H19  SING N N 57 
XO7 C05 H20  SING N N 58 
XO7 C08 H21  SING N N 59 
XO7 C09 H22  SING N N 60 
XO7 C30 H23  SING N N 61 
XO7 C31 H24  SING N N 62 
XO7 C34 H25  SING N N 63 
XO7 C35 H26  SING N N 64 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XO7 SMILES           ACDLabs              12.01 "c1ccc(cc1OC(F)(F)F)N2CC(CCC)N(CC2=O)Cc4cncn4Cc3ccc(Br)cc3"                                                                                                                      
XO7 InChI            InChI                1.03  "InChI=1S/C25H26BrF3N4O2/c1-2-4-21-15-33(20-5-3-6-23(11-20)35-25(27,28)29)24(34)16-31(21)14-22-12-30-17-32(22)13-18-7-9-19(26)10-8-18/h3,5-12,17,21H,2,4,13-16H2,1H3/t21-/m0/s1" 
XO7 InChIKey         InChI                1.03  MMOUEYPUGKAJHU-NRFANRHFSA-N                                                                                                                                                      
XO7 SMILES_CANONICAL CACTVS               3.385 "CCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(Br)cc3)c4cccc(OC(F)(F)F)c4"                                                                                                                  
XO7 SMILES           CACTVS               3.385 "CCC[CH]1CN(C(=O)CN1Cc2cncn2Cc3ccc(Br)cc3)c4cccc(OC(F)(F)F)c4"                                                                                                                   
XO7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC[C@H]1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)Br)c4cccc(c4)OC(F)(F)F"                                                                                                                  
XO7 SMILES           "OpenEye OEToolkits" 2.0.7 "CCCC1CN(C(=O)CN1Cc2cncn2Cc3ccc(cc3)Br)c4cccc(c4)OC(F)(F)F"                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XO7 "SYSTEMATIC NAME" ACDLabs              12.01 "(5S)-4-({1-[(4-bromophenyl)methyl]-1H-imidazol-5-yl}methyl)-5-propyl-1-[3-(trifluoromethoxy)phenyl]piperazin-2-one"  
XO7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(5~{S})-4-[[3-[(4-bromophenyl)methyl]imidazol-4-yl]methyl]-5-propyl-1-[3-(trifluoromethyloxy)phenyl]piperazin-2-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XO7 "Create component" 2020-12-22 RCSB 
XO7 "Initial release"  2022-11-09 RCSB 
# 
