data_XJ7
#

_chem_comp.id                                   XJ7
_chem_comp.name                                 "(2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C26 H49 O13 P"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-12-17
_chem_comp.pdbx_modified_date                   2021-09-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       600.633
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XJ7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7L2H
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XJ7  C10  C1   C  0  1  N  N  N  110.841  142.598  121.311  -4.138  -2.473   4.632  C10  XJ7   1  
XJ7  O11  O1   O  0  1  N  N  N  108.798  140.433  129.736  -6.860  -0.526   0.185  O11  XJ7   2  
XJ7  C16  C2   C  0  1  N  N  N  110.751  137.681  119.489   7.567   0.579  -0.054  C16  XJ7   3  
XJ7  C17  C3   C  0  1  N  N  N  110.729  138.843  118.496   8.998   0.042  -0.132  C17  XJ7   4  
XJ7  C19  C4   C  0  1  N  N  N  110.147  139.568  116.111  11.405   0.588   0.252  C19  XJ7   5  
XJ7  C20  C5   C  0  1  N  N  N  109.859  138.998  114.724  12.382   1.671   0.714  C20  XJ7   6  
XJ7  C21  C6   C  0  1  N  N  N  109.583  140.077  113.684  13.813   1.134   0.636  C21  XJ7   7  
XJ7  C23  C7   C  0  1  N  N  N  109.082  140.559  111.240  16.221   1.680   1.020  C23  XJ7   8  
XJ7  C25  C8   C  0  1  N  N  S  108.290  140.255  132.023  -7.691   1.716   0.531  C25  XJ7   9  
XJ7  C1   C9   C  0  1  N  N  R  105.961  139.258  132.616  -6.240   3.651  -0.094  C1   XJ7  10  
XJ7  C    C10  C  0  1  N  N  N  107.238  139.964  133.099  -7.270   3.137   0.913  C    XJ7  11  
XJ7  O    O2   O  0  1  N  N  N  106.877  141.192  133.658  -6.693   3.127   2.221  O    XJ7  12  
XJ7  C11  C11  C  0  1  N  N  N  106.473  136.521  123.389   1.789  -1.580  -1.277  C11  XJ7  13  
XJ7  C12  C12  C  0  1  N  N  N  107.503  135.624  122.720   2.752  -0.513  -0.822  C12  XJ7  14  
XJ7  C13  C13  C  0  1  N  N  N  107.739  135.995  121.259   4.182  -1.050  -0.900  C13  XJ7  15  
XJ7  C14  C14  C  0  1  N  N  N  109.212  136.233  120.931   5.159   0.033  -0.438  C14  XJ7  16  
XJ7  C15  C15  C  0  1  N  N  N  109.380  137.031  119.646   6.590  -0.504  -0.516  C15  XJ7  17  
XJ7  C18  C16  C  0  1  N  N  N  110.101  138.465  117.161   9.975   1.125   0.330  C18  XJ7  18  
XJ7  C2   C17  C  0  1  N  N  S  105.530  139.635  131.204  -5.014   2.735  -0.084  C2   XJ7  19  
XJ7  C22  C18  C  0  1  N  N  N  109.283  139.490  112.310  14.790   2.217   1.098  C22  XJ7  20  
XJ7  C24  C19  C  0  1  N  N  R  107.730  140.501  130.628  -6.466   0.800   0.542  C24  XJ7  21  
XJ7  C3   C20  C  0  1  N  N  N  106.692  139.455  130.244  -5.436   1.315  -0.466  C3   XJ7  22  
XJ7  C4   C21  C  0  1  N  N  N  107.558  138.093  126.551  -1.646  -1.811  -2.398  C4   XJ7  23  
XJ7  C5   C22  C  0  1  N  N  S  107.800  137.337  125.244  -0.398  -2.405  -1.743  C5   XJ7  24  
XJ7  C6   C23  C  0  1  N  N  N  109.089  137.895  124.665  -0.809  -3.264  -0.546  C6   XJ7  25  
XJ7  C7   C24  C  0  1  N  N  N  110.041  139.866  123.927  -2.063  -3.082   1.472  C7   XJ7  26  
XJ7  C8   C25  C  0  1  N  N  N  109.818  140.771  122.732  -2.909  -2.323   2.463  C8   XJ7  27  
XJ7  C9   C26  C  0  1  N  N  N  111.065  141.583  122.425  -3.280  -3.243   3.627  C9   XJ7  28  
XJ7  O1   O3   O  0  1  N  N  N  104.917  139.630  133.474  -5.846   4.978   0.262  O1   XJ7  29  
XJ7  O10  O4   O  0  1  N  N  N  105.352  136.353  123.076   2.205  -2.659  -1.628  O10  XJ7  30  
XJ7  O12  O5   O  0  1  N  N  N  108.954  141.420  132.428  -8.653   1.236   1.472  O12  XJ7  31  
XJ7  O2   O6   O  0  1  N  N  N  104.463  138.821  130.821  -4.052   3.216  -1.025  O2   XJ7  32  
XJ7  O3   O7   O  0  1  N  N  N  106.274  139.663  128.919  -4.292   0.459  -0.456  O3   XJ7  33  
XJ7  O4   O8   O  0  1  N  N  N  104.719  137.696  129.106  -4.897  -1.424  -2.189  O4   XJ7  34  
XJ7  O5   O9   O  0  1  N  N  N  104.497  139.129  127.170  -3.566   0.610  -2.869  O5   XJ7  35  
XJ7  O6   O10  O  0  1  N  N  N  106.502  137.539  127.270  -2.404  -1.098  -1.418  O6   XJ7  36  
XJ7  O7   O11  O  0  1  N  N  N  108.974  139.278  124.595  -1.618  -2.472   0.363  O7   XJ7  37  
XJ7  O8   O12  O  0  1  N  N  N  111.138  139.666  124.290  -1.786  -4.240   1.677  O8   XJ7  38  
XJ7  O9   O13  O  0  1  N  N  N  106.784  137.539  124.311   0.470  -1.331  -1.293  O9   XJ7  39  
XJ7  P    P1   P  0  1  N  N  N  105.471  138.500  128.107  -3.785  -0.342  -1.757  P    XJ7  40  
XJ7  H1   H1   H  0  1  N  N  N  111.772  143.156  121.130  -3.577  -1.618   5.010  H1   XJ7  41  
XJ7  H2   H2   H  0  1  N  N  N  110.544  142.073  120.391  -5.047  -2.123   4.142  H2   XJ7  42  
XJ7  H3   H3   H  0  1  N  N  N  110.046  143.298  121.607  -4.403  -3.128   5.462  H3   XJ7  43  
XJ7  H4   H4   H  0  1  N  N  N  109.449  141.084  129.971  -7.513  -0.916   0.782  H4   XJ7  44  
XJ7  H5   H5   H  0  1  N  N  N  111.464  136.923  119.132   7.340   0.858   0.975  H5   XJ7  45  
XJ7  H6   H6   H  0  1  N  N  N  111.078  138.059  120.469   7.471   1.453  -0.698  H6   XJ7  46  
XJ7  H7   H7   H  0  1  N  N  N  111.763  139.173  118.317   9.093  -0.833   0.511  H7   XJ7  47  
XJ7  H8   H8   H  0  1  N  N  N  110.151  139.670  118.935   9.225  -0.238  -1.161  H8   XJ7  48  
XJ7  H9   H9   H  0  1  N  N  N  111.146  140.028  116.113  11.633   0.308  -0.777  H9   XJ7  49  
XJ7  H10  H10  H  0  1  N  N  N  109.392  140.330  116.353  11.501  -0.287   0.895  H10  XJ7  50  
XJ7  H11  H11  H  0  1  N  N  N  108.979  138.341  114.790  12.287   2.545   0.070  H11  XJ7  51  
XJ7  H12  H12  H  0  1  N  N  N  110.730  138.411  114.398  12.155   1.950   1.742  H12  XJ7  52  
XJ7  H13  H13  H  0  1  N  N  N  110.466  140.728  113.606  13.909   0.259   1.279  H13  XJ7  53  
XJ7  H14  H14  H  0  1  N  N  N  108.717  140.672  114.012  14.040   0.854  -0.393  H14  XJ7  54  
XJ7  H15  H15  H  0  1  N  N  N  108.870  140.077  110.274  16.316   0.805   1.663  H15  XJ7  55  
XJ7  H16  H16  H  0  1  N  N  N  108.237  141.205  111.521  16.448   1.400  -0.009  H16  XJ7  56  
XJ7  H17  H17  H  0  1  N  N  N  109.995  141.167  111.153  16.917   2.451   1.349  H17  XJ7  57  
XJ7  H18  H18  H  0  1  N  N  N  108.991  139.408  131.979  -8.131   1.724  -0.466  H18  XJ7  58  
XJ7  H19  H19  H  0  1  N  N  N  106.124  138.171  132.658  -6.679   3.658  -1.092  H19  XJ7  59  
XJ7  H20  H20  H  0  1  N  N  N  107.705  139.329  133.866  -8.143   3.789   0.906  H20  XJ7  60  
XJ7  H21  H21  H  0  1  N  N  N  106.223  141.053  134.333  -6.402   3.996   2.529  H21  XJ7  61  
XJ7  H22  H22  H  0  1  N  N  N  107.149  134.584  122.767   2.656   0.361  -1.466  H22  XJ7  62  
XJ7  H23  H23  H  0  1  N  N  N  108.455  135.712  123.265   2.524  -0.234   0.207  H23  XJ7  63  
XJ7  H24  H24  H  0  1  N  N  N  107.178  136.915  121.036   4.278  -1.925  -0.257  H24  XJ7  64  
XJ7  H25  H25  H  0  1  N  N  N  107.367  135.176  120.626   4.410  -1.330  -1.929  H25  XJ7  65  
XJ7  H26  H26  H  0  1  N  N  N  109.713  135.261  120.815   5.064   0.907  -1.082  H26  XJ7  66  
XJ7  H27  H27  H  0  1  N  N  N  109.676  136.788  121.759   4.932   0.312   0.591  H27  XJ7  67  
XJ7  H28  H28  H  0  1  N  N  N  108.618  137.824  119.630   6.817  -0.784  -1.545  H28  XJ7  68  
XJ7  H29  H29  H  0  1  N  N  N  109.220  136.352  118.795   6.686  -1.379   0.127  H29  XJ7  69  
XJ7  H30  H30  H  0  1  N  N  N  109.048  138.202  117.338   9.879   1.999  -0.314  H30  XJ7  70  
XJ7  H31  H31  H  0  1  N  N  N  110.636  137.589  116.764   9.747   1.404   1.359  H31  XJ7  71  
XJ7  H32  H32  H  0  1  N  N  N  105.228  140.693  131.199  -4.575   2.728   0.914  H32  XJ7  72  
XJ7  H33  H33  H  0  1  N  N  N  108.367  138.885  112.379  14.694   3.091   0.454  H33  XJ7  73  
XJ7  H34  H34  H  0  1  N  N  N  110.125  138.848  112.011  14.563   2.496   2.126  H34  XJ7  74  
XJ7  H35  H35  H  0  1  N  N  N  107.262  141.496  130.601  -6.026   0.793   1.539  H35  XJ7  75  
XJ7  H36  H36  H  0  1  N  N  N  107.121  138.450  130.371  -5.876   1.322  -1.463  H36  XJ7  76  
XJ7  H37  H37  H  0  1  N  N  N  108.470  138.049  127.164  -1.349  -1.129  -3.195  H37  XJ7  77  
XJ7  H38  H38  H  0  1  N  N  N  107.322  139.142  126.319  -2.255  -2.613  -2.814  H38  XJ7  78  
XJ7  H39  H39  H  0  1  N  N  N  107.932  136.267  125.463   0.134  -3.022  -2.467  H39  XJ7  79  
XJ7  H40  H40  H  0  1  N  N  N  109.253  137.484  123.658  -1.387  -4.120  -0.894  H40  XJ7  80  
XJ7  H41  H41  H  0  1  N  N  N  109.935  137.625  125.313   0.083  -3.615  -0.027  H41  XJ7  81  
XJ7  H42  H42  H  0  1  N  N  N  108.986  141.457  122.950  -2.347  -1.469   2.840  H42  XJ7  82  
XJ7  H43  H43  H  0  1  N  N  N  109.565  140.155  121.856  -3.817  -1.974   1.972  H43  XJ7  83  
XJ7  H44  H44  H  0  1  N  N  N  111.867  140.895  122.120  -2.372  -3.593   4.118  H44  XJ7  84  
XJ7  H45  H45  H  0  1  N  N  N  111.369  142.120  123.336  -3.842  -4.098   3.250  H45  XJ7  85  
XJ7  H46  H46  H  0  1  N  N  N  105.148  139.410  134.369  -6.574   5.614   0.276  H46  XJ7  86  
XJ7  H47  H47  H  0  1  N  N  N  109.314  141.294  133.298  -9.458   1.770   1.519  H47  XJ7  87  
XJ7  H48  H48  H  0  1  N  N  N  103.741  138.939  131.426  -3.739   4.113  -0.844  H48  XJ7  88  
XJ7  H49  H49  H  0  1  N  N  N  103.788  137.760  128.928  -5.091  -2.081  -1.507  H49  XJ7  89  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XJ7  C23  C22  SING  N  N   1  
XJ7  C22  C21  SING  N  N   2  
XJ7  C21  C20  SING  N  N   3  
XJ7  C20  C19  SING  N  N   4  
XJ7  C19  C18  SING  N  N   5  
XJ7  C18  C17  SING  N  N   6  
XJ7  C17  C16  SING  N  N   7  
XJ7  C16  C15  SING  N  N   8  
XJ7  C15  C14  SING  N  N   9  
XJ7  C14  C13  SING  N  N  10  
XJ7  C13  C12  SING  N  N  11  
XJ7  C10  C9   SING  N  N  12  
XJ7  C9   C8   SING  N  N  13  
XJ7  C12  C11  SING  N  N  14  
XJ7  C8   C7   SING  N  N  15  
XJ7  O10  C11  DOUB  N  N  16  
XJ7  C11  O9   SING  N  N  17  
XJ7  C7   O8   DOUB  N  N  18  
XJ7  C7   O7   SING  N  N  19  
XJ7  O9   C5   SING  N  N  20  
XJ7  O7   C6   SING  N  N  21  
XJ7  C6   C5   SING  N  N  22  
XJ7  C5   C4   SING  N  N  23  
XJ7  C4   O6   SING  N  N  24  
XJ7  O5   P    DOUB  N  N  25  
XJ7  O6   P    SING  N  N  26  
XJ7  P    O3   SING  N  N  27  
XJ7  P    O4   SING  N  N  28  
XJ7  O3   C3   SING  N  N  29  
XJ7  O11  C24  SING  N  N  30  
XJ7  C3   C24  SING  N  N  31  
XJ7  C3   C2   SING  N  N  32  
XJ7  C24  C25  SING  N  N  33  
XJ7  O2   C2   SING  N  N  34  
XJ7  C2   C1   SING  N  N  35  
XJ7  C25  O12  SING  N  N  36  
XJ7  C25  C    SING  N  N  37  
XJ7  C1   C    SING  N  N  38  
XJ7  C1   O1   SING  N  N  39  
XJ7  C    O    SING  N  N  40  
XJ7  C10  H1   SING  N  N  41  
XJ7  C10  H2   SING  N  N  42  
XJ7  C10  H3   SING  N  N  43  
XJ7  O11  H4   SING  N  N  44  
XJ7  C16  H5   SING  N  N  45  
XJ7  C16  H6   SING  N  N  46  
XJ7  C17  H7   SING  N  N  47  
XJ7  C17  H8   SING  N  N  48  
XJ7  C19  H9   SING  N  N  49  
XJ7  C19  H10  SING  N  N  50  
XJ7  C20  H11  SING  N  N  51  
XJ7  C20  H12  SING  N  N  52  
XJ7  C21  H13  SING  N  N  53  
XJ7  C21  H14  SING  N  N  54  
XJ7  C23  H15  SING  N  N  55  
XJ7  C23  H16  SING  N  N  56  
XJ7  C23  H17  SING  N  N  57  
XJ7  C25  H18  SING  N  N  58  
XJ7  C1   H19  SING  N  N  59  
XJ7  C    H20  SING  N  N  60  
XJ7  O    H21  SING  N  N  61  
XJ7  C12  H22  SING  N  N  62  
XJ7  C12  H23  SING  N  N  63  
XJ7  C13  H24  SING  N  N  64  
XJ7  C13  H25  SING  N  N  65  
XJ7  C14  H26  SING  N  N  66  
XJ7  C14  H27  SING  N  N  67  
XJ7  C15  H28  SING  N  N  68  
XJ7  C15  H29  SING  N  N  69  
XJ7  C18  H30  SING  N  N  70  
XJ7  C18  H31  SING  N  N  71  
XJ7  C2   H32  SING  N  N  72  
XJ7  C22  H33  SING  N  N  73  
XJ7  C22  H34  SING  N  N  74  
XJ7  C24  H35  SING  N  N  75  
XJ7  C3   H36  SING  N  N  76  
XJ7  C4   H37  SING  N  N  77  
XJ7  C4   H38  SING  N  N  78  
XJ7  C5   H39  SING  N  N  79  
XJ7  C6   H40  SING  N  N  80  
XJ7  C6   H41  SING  N  N  81  
XJ7  C8   H42  SING  N  N  82  
XJ7  C8   H43  SING  N  N  83  
XJ7  C9   H44  SING  N  N  84  
XJ7  C9   H45  SING  N  N  85  
XJ7  O1   H46  SING  N  N  86  
XJ7  O12  H47  SING  N  N  87  
XJ7  O2   H48  SING  N  N  88  
XJ7  O4   H49  SING  N  N  89  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XJ7  SMILES            ACDLabs               12.01  "CCCC(=O)OCC(COP(OC1C(C(C(C(O)C1O)O)O)O)(O)=O)OC(CCCCCCCCCCCC)=O"  
XJ7  InChI             InChI                 1.03   "InChI=1S/C26H49O13P/c1-3-5-6-7-8-9-10-11-12-13-15-20(28)38-18(16-36-19(27)14-4-2)17-37-40(34,35)39-26-24(32)22(30)21(29)23(31)25(26)33/h18,21-26,29-33H,3-17H2,1-2H3,(H,34,35)/t18-,21-,22+,23-,24-,25+,26+/m0/s1"  
XJ7  InChIKey          InChI                 1.03   PJDJYKJPFGJDMA-QYTLEKTISA-N  
XJ7  SMILES_CANONICAL  CACTVS                3.385  "CCCCCCCCCCCCC(=O)O[C@@H](COC(=O)CCC)CO[P](O)(=O)O[C@@H]1[C@@H](O)[C@H](O)[C@H](O)[C@H](O)[C@H]1O"  
XJ7  SMILES            CACTVS                3.385  "CCCCCCCCCCCCC(=O)O[CH](COC(=O)CCC)CO[P](O)(=O)O[CH]1[CH](O)[CH](O)[CH](O)[CH](O)[CH]1O"  
XJ7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CCCCCCCCCCCCC(=O)O[C@@H](COC(=O)CCC)COP(=O)(O)OC1[C@@H]([C@H](C([C@H]([C@@H]1O)O)O)O)O"  
XJ7  SMILES            "OpenEye OEToolkits"  2.0.7  "CCCCCCCCCCCCC(=O)OC(COC(=O)CCC)COP(=O)(O)OC1C(C(C(C(C1O)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XJ7  "SYSTEMATIC NAME"  ACDLabs               12.01  "(2S)-1-(butanoyloxy)-3-{[(R)-hydroxy{[(1r,2R,3S,4S,5R,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}propan-2-yl tridecanoate"  
XJ7  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(2~{S})-1-butanoyloxy-3-[oxidanyl-[(2~{R},3~{S},5~{R},6~{S})-2,3,4,5,6-pentakis(oxidanyl)cyclohexyl]oxy-phosphoryl]oxy-propan-2-yl] tridecanoate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XJ7  "Create component"  2020-12-17  RCSB  
XJ7  "Initial release"   2021-09-22  RCSB  
##
