data_V17
#

_chem_comp.id                                   V17
_chem_comp.name                                 "(4-{[4-(1-benzothiophen-2-yl)pyrimidin-2-yl]amino}phenyl)[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C28 H29 N5 O S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-06-12
_chem_comp.pdbx_modified_date                   2021-07-30
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       483.628
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    V17
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6XE5
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
V17  C4   C1   C  0  1  N  N  N   9.949  -20.244  -10.481    6.829  -0.751   0.327  C4   V17   1  
V17  C14  C2   C  0  1  Y  N  N  10.131  -17.464   -3.762    0.657   0.705   0.152  C14  V17   2  
V17  C5   C3   C  0  1  N  N  N  10.699  -18.946  -10.746    7.228   0.695   0.022  C5   V17   3  
V17  C6   C4   C  0  1  N  N  N  10.183  -17.828   -9.847    6.267   1.648   0.739  C6   V17   4  
V17  C11  C5   C  0  1  Y  N  N  10.631  -19.384   -5.682    1.980   2.531  -1.474  C11  V17   5  
V17  C7   C6   C  0  1  N  N  N   9.249  -19.428   -8.226    4.431  -0.078   0.523  C7   V17   6  
V17  C8   C7   C  0  1  N  N  N   8.771  -20.021   -9.545    5.413  -1.011  -0.193  C8   V17   7  
V17  C9   C8   C  0  1  N  N  N  10.758  -17.609   -7.466    4.063   2.250  -0.140  C9   V17   8  
V17  C10  C9   C  0  1  Y  N  N  10.554  -18.050   -6.057    2.649   1.924  -0.408  C10  V17   9  
V17  C12  C10  C  0  1  Y  N  N  10.465  -19.757   -4.361    0.663   2.220  -1.725  C12  V17  10  
V17  C13  C11  C  0  1  Y  N  N  10.214  -18.797   -3.390   -0.006   1.311  -0.911  C13  V17  11  
V17  N1   N1   N  0  1  N  N  N  10.106  -18.258   -8.447    4.890   1.308   0.356  N1   V17  12  
V17  N2   N2   N  0  1  N  N  N  10.040  -19.134   -2.041   -1.342   1.007  -1.160  N2   V17  13  
V17  C3   C12  C  0  1  N  N  N  10.560  -21.277  -12.730    9.156  -1.443   0.147  C3   V17  14  
V17  N3   N3   N  0  1  Y  N  N   9.942  -20.231   -0.056   -1.803   1.067   1.131  N3   V17  15  
V17  O    O1   O  0  1  N  N  N  11.466  -16.651   -7.692    4.482   3.369  -0.365  O    V17  16  
V17  N    N4   N  0  1  N  N  N   9.554  -20.924  -11.722    7.768  -1.667  -0.333  N    V17  17  
V17  C2   C13  C  0  1  N  N  N   8.617  -22.051  -11.754    7.480  -3.078   0.030  C2   V17  18  
V17  C1   C14  C  0  1  N  N  N   9.506  -23.267  -11.892    8.796  -3.832  -0.260  C1   V17  19  
V17  C    C15  C  0  1  N  N  N  10.772  -22.763  -12.539    9.899  -2.756  -0.183  C    V17  20  
V17  C15  C16  C  0  1  Y  N  N  10.299  -17.097   -5.083    1.976   1.007   0.405  C15  V17  21  
V17  C16  C17  C  0  1  Y  N  N  10.218  -20.298   -1.366   -2.222   0.832  -0.104  C16  V17  22  
V17  N4   N5   N  0  1  Y  N  N  10.621  -21.384   -2.039   -3.458   0.435  -0.355  N4   V17  23  
V17  C19  C18  C  0  1  Y  N  N  10.750  -22.510   -1.325   -4.329   0.257   0.639  C19  V17  24  
V17  C18  C19  C  0  1  Y  N  N  10.487  -22.554    0.032   -3.914   0.498   1.954  C18  V17  25  
V17  C17  C20  C  0  1  Y  N  N  10.087  -21.377    0.619   -2.612   0.912   2.167  C17  V17  26  
V17  C20  C21  C  0  1  Y  N  N  11.218  -23.685   -2.050   -5.710  -0.186   0.357  C20  V17  27  
V17  S    S1   S  0  1  Y  N  N  11.827  -23.501   -3.668   -6.936  -0.442   1.583  S    V17  28  
V17  C27  C22  C  0  1  Y  N  N  12.192  -25.192   -3.766   -8.136  -0.908   0.384  C27  V17  29  
V17  C22  C23  C  0  1  Y  N  N  11.843  -25.872   -2.592   -7.574  -0.854  -0.896  C22  V17  30  
V17  C21  C24  C  0  1  Y  N  N  11.288  -24.966   -1.633   -6.186  -0.437  -0.862  C21  V17  31  
V17  C26  C25  C  0  1  Y  N  N  12.773  -25.860   -4.838   -9.472  -1.293   0.539  C26  V17  32  
V17  C25  C26  C  0  1  Y  N  N  13.007  -27.219   -4.741  -10.230  -1.618  -0.561  C25  V17  33  
V17  C24  C27  C  0  1  Y  N  N  12.660  -27.908   -3.599   -9.675  -1.566  -1.833  C24  V17  34  
V17  C23  C28  C  0  1  Y  N  N  12.082  -27.246   -2.529   -8.378  -1.193  -2.008  C23  V17  35  
V17  H1   H1   H  0  1  N  N  N  10.648  -20.909   -9.954    6.857  -0.916   1.404  H1   V17  36  
V17  H2   H2   H  0  1  N  N  N   9.934  -16.709   -3.015    0.135  -0.000   0.782  H2   V17  37  
V17  H3   H3   H  0  1  N  N  N  11.770  -19.102  -10.549    8.245   0.873   0.371  H3   V17  38  
V17  H4   H4   H  0  1  N  N  N  10.558  -18.657  -11.798    7.176   0.868  -1.053  H4   V17  39  
V17  H5   H5   H  0  1  N  N  N  10.864  -16.967   -9.920    6.383   1.540   1.818  H5   V17  40  
V17  H6   H6   H  0  1  N  N  N   9.179  -17.531  -10.186    6.485   2.675   0.447  H6   V17  41  
V17  H7   H7   H  0  1  N  N  N  10.823  -20.139   -6.430    2.499   3.237  -2.106  H7   V17  42  
V17  H8   H8   H  0  1  N  N  N   8.374  -19.124   -7.632    3.438  -0.189   0.087  H8   V17  43  
V17  H9   H9   H  0  1  N  N  N   9.819  -20.191   -7.676    4.396  -0.328   1.583  H9   V17  44  
V17  H10  H10  H  0  1  N  N  N   8.058  -19.329  -10.017    5.379  -0.822  -1.265  H10  V17  45  
V17  H11  H11  H  0  1  N  N  N   8.274  -20.983   -9.351    5.139  -2.047   0.004  H11  V17  46  
V17  H12  H12  H  0  1  N  N  N  10.531  -20.799   -4.084    0.146   2.689  -2.549  H12  V17  47  
V17  H13  H13  H  0  1  N  N  N   9.726  -18.376   -1.469   -1.656   0.917  -2.074  H13  V17  48  
V17  H14  H14  H  0  1  N  N  N  11.495  -20.724  -12.558    9.611  -0.606  -0.383  H14  V17  49  
V17  H15  H15  H  0  1  N  N  N  10.189  -21.063  -13.743    9.163  -1.263   1.222  H15  V17  50  
V17  H17  H17  H  0  1  N  N  N   7.934  -21.967  -12.613    7.224  -3.154   1.087  H17  V17  51  
V17  H18  H18  H  0  1  N  N  N   8.032  -22.099  -10.824    6.671  -3.472  -0.586  H18  V17  52  
V17  H19  H19  H  0  1  N  N  N   9.025  -24.026  -12.526    8.965  -4.602   0.493  H19  V17  53  
V17  H20  H20  H  0  1  N  N  N   9.724  -23.699  -10.904    8.766  -4.276  -1.255  H20  V17  54  
V17  H21  H21  H  0  1  N  N  N  10.932  -23.257  -13.509   10.411  -2.671  -1.141  H21  V17  55  
V17  H22  H22  H  0  1  N  N  N  11.638  -22.948  -11.886   10.609  -2.998   0.607  H22  V17  56  
V17  H23  H23  H  0  1  N  N  N  10.231  -16.055   -5.360    2.490   0.536   1.230  H23  V17  57  
V17  H24  H24  H  0  1  N  N  N  10.591  -23.466    0.601   -4.594   0.365   2.782  H24  V17  58  
V17  H25  H25  H  0  1  N  N  N   9.879  -21.377    1.679   -2.259   1.107   3.169  H25  V17  59  
V17  H26  H26  H  0  1  N  N  N  10.953  -25.282   -0.656   -5.586  -0.333  -1.755  H26  V17  60  
V17  H27  H27  H  0  1  N  N  N  13.039  -25.323   -5.737   -9.909  -1.335   1.525  H27  V17  61  
V17  H28  H28  H  0  1  N  N  N  13.465  -27.744   -5.566  -11.261  -1.915  -0.435  H28  V17  62  
V17  H29  H29  H  0  1  N  N  N  12.840  -28.971   -3.538  -10.278  -1.824  -2.691  H29  V17  63  
V17  H30  H30  H  0  1  N  N  N  11.814  -27.797   -1.639   -7.961  -1.157  -3.003  H30  V17  64  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
V17  C3   C    SING  N  N   1  
V17  C3   N    SING  N  N   2  
V17  C    C1   SING  N  N   3  
V17  C1   C2   SING  N  N   4  
V17  C2   N    SING  N  N   5  
V17  N    C4   SING  N  N   6  
V17  C5   C4   SING  N  N   7  
V17  C5   C6   SING  N  N   8  
V17  C4   C8   SING  N  N   9  
V17  C6   N1   SING  N  N  10  
V17  C8   C7   SING  N  N  11  
V17  N1   C7   SING  N  N  12  
V17  N1   C9   SING  N  N  13  
V17  O    C9   DOUB  N  N  14  
V17  C9   C10  SING  N  N  15  
V17  C10  C11  DOUB  Y  N  16  
V17  C10  C15  SING  Y  N  17  
V17  C11  C12  SING  Y  N  18  
V17  C15  C14  DOUB  Y  N  19  
V17  C26  C25  DOUB  Y  N  20  
V17  C26  C27  SING  Y  N  21  
V17  C25  C24  SING  Y  N  22  
V17  C12  C13  DOUB  Y  N  23  
V17  C27  S    SING  Y  N  24  
V17  C27  C22  DOUB  Y  N  25  
V17  C14  C13  SING  Y  N  26  
V17  S    C20  SING  Y  N  27  
V17  C24  C23  DOUB  Y  N  28  
V17  C13  N2   SING  N  N  29  
V17  C22  C23  SING  Y  N  30  
V17  C22  C21  SING  Y  N  31  
V17  C20  C21  DOUB  Y  N  32  
V17  C20  C19  SING  N  N  33  
V17  N2   C16  SING  N  N  34  
V17  N4   C16  DOUB  Y  N  35  
V17  N4   C19  SING  Y  N  36  
V17  C16  N3   SING  Y  N  37  
V17  C19  C18  DOUB  Y  N  38  
V17  N3   C17  DOUB  Y  N  39  
V17  C18  C17  SING  Y  N  40  
V17  C4   H1   SING  N  N  41  
V17  C14  H2   SING  N  N  42  
V17  C5   H3   SING  N  N  43  
V17  C5   H4   SING  N  N  44  
V17  C6   H5   SING  N  N  45  
V17  C6   H6   SING  N  N  46  
V17  C11  H7   SING  N  N  47  
V17  C7   H8   SING  N  N  48  
V17  C7   H9   SING  N  N  49  
V17  C8   H10  SING  N  N  50  
V17  C8   H11  SING  N  N  51  
V17  C12  H12  SING  N  N  52  
V17  N2   H13  SING  N  N  53  
V17  C3   H14  SING  N  N  54  
V17  C3   H15  SING  N  N  55  
V17  C2   H17  SING  N  N  56  
V17  C2   H18  SING  N  N  57  
V17  C1   H19  SING  N  N  58  
V17  C1   H20  SING  N  N  59  
V17  C    H21  SING  N  N  60  
V17  C    H22  SING  N  N  61  
V17  C15  H23  SING  N  N  62  
V17  C18  H24  SING  N  N  63  
V17  C17  H25  SING  N  N  64  
V17  C21  H26  SING  N  N  65  
V17  C26  H27  SING  N  N  66  
V17  C25  H28  SING  N  N  67  
V17  C24  H29  SING  N  N  68  
V17  C23  H30  SING  N  N  69  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
V17  SMILES            ACDLabs               12.01  "C1(CCN(CC1)C(c2ccc(cc2)Nc3nccc(n3)c4cc5c(s4)cccc5)=O)N6CCCC6"  
V17  InChI             InChI                 1.03   "InChI=1S/C28H29N5OS/c34-27(33-17-12-23(13-18-33)32-15-3-4-16-32)20-7-9-22(10-8-20)30-28-29-14-11-24(31-28)26-19-21-5-1-2-6-25(21)35-26/h1-2,5-11,14,19,23H,3-4,12-13,15-18H2,(H,29,30,31)"  
V17  InChIKey          InChI                 1.03   BWZJBXAPRCVCKQ-UHFFFAOYSA-N  
V17  SMILES_CANONICAL  CACTVS                3.385  "O=C(N1CCC(CC1)N2CCCC2)c3ccc(Nc4nccc(n4)c5sc6ccccc6c5)cc3"  
V17  SMILES            CACTVS                3.385  "O=C(N1CCC(CC1)N2CCCC2)c3ccc(Nc4nccc(n4)c5sc6ccccc6c5)cc3"  
V17  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)cc(s2)c3ccnc(n3)Nc4ccc(cc4)C(=O)N5CCC(CC5)N6CCCC6"  
V17  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc2c(c1)cc(s2)c3ccnc(n3)Nc4ccc(cc4)C(=O)N5CCC(CC5)N6CCCC6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
V17  "SYSTEMATIC NAME"  ACDLabs               12.01  "(4-{[4-(1-benzothiophen-2-yl)pyrimidin-2-yl]amino}phenyl)[4-(pyrrolidin-1-yl)piperidin-1-yl]methanone"  
V17  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[4-[[4-(1-benzothiophen-2-yl)pyrimidin-2-yl]amino]phenyl]-(4-pyrrolidin-1-ylpiperidin-1-yl)methanone"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
V17  "Create component"  2020-06-12  RCSB  
V17  "Initial release"   2021-08-04  RCSB  
##
