data_TJ7
# 
_chem_comp.id                                    TJ7 
_chem_comp.name                                  
;(2R,4S)-2-[(1S)-1-{[(2R)-2-carboxy-2-(thiophen-3-yl)acetyl]amino}-1-methoxy-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4
-carboxylic acid
;
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C16 H20 N2 O7 S2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         temocillin 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-10-15 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        416.469 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TJ7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6UNB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TJ7 O7  O1  O 0 1 N N N N N N -3.482 -2.695 13.406 -1.512 -0.206 2.464  O7  TJ7 1  
TJ7 C15 C1  C 0 1 N N N N N N -3.838 -3.460 14.271 -0.531 0.282  1.957  C15 TJ7 2  
TJ7 C6  C2  C 0 1 N N S N N N -4.736 -4.669 14.039 -0.560 0.698  0.508  C6  TJ7 3  
TJ7 O5  O2  O 0 1 N N N N N N -5.464 -4.914 15.227 -0.298 2.099  0.410  O5  TJ7 4  
TJ7 C14 C3  C 0 1 N N N N N N -6.340 -6.037 15.311 -0.302 2.599  -0.929 C14 TJ7 5  
TJ7 C   C4  C 0 1 N N R N N N -3.906 -5.914 13.776 -1.938 0.394  -0.082 C   TJ7 6  
TJ7 S   S1  S 0 1 N N N N N N -4.737 -7.215 12.888 -2.336 -1.398 0.049  S   TJ7 7  
TJ7 C3  C5  C 0 1 N N N N N N -3.516 -7.349 11.628 -4.155 -1.151 0.098  C3  TJ7 8  
TJ7 C4  C6  C 0 1 N N N N N N -2.571 -8.454 12.030 -4.774 -1.420 -1.276 C4  TJ7 9  
TJ7 C5  C7  C 0 1 N N N N N N -4.168 -7.603 10.282 -4.795 -2.048 1.160  C5  TJ7 10 
TJ7 C1  C8  C 0 1 N N S N N N -2.829 -5.975 11.641 -4.307 0.333  0.479  C1  TJ7 11 
TJ7 C2  C9  C 0 1 N N N N N N -1.516 -5.949 10.908 -4.990 1.059  -0.651 C2  TJ7 12 
TJ7 O1  O3  O 0 1 N N N N N N -0.471 -6.089 11.463 -6.323 0.984  -0.787 O1  TJ7 13 
TJ7 O   O4  O 0 1 N N N N N N -1.546 -5.804 9.594  -4.338 1.707  -1.435 O   TJ7 14 
TJ7 N   N1  N 0 1 N N N N N N -2.681 -5.568 13.054 -3.022 0.986  0.751  N   TJ7 15 
TJ7 N1  N2  N 0 1 N N N N N N -5.671 -4.405 12.986 0.463  -0.043 -0.233 N1  TJ7 16 
TJ7 C7  C10 C 0 1 N N N N N N -6.445 -3.358 13.015 1.768  0.244  -0.052 C7  TJ7 17 
TJ7 O2  O5  O 0 1 N N N N N N -6.339 -2.513 13.914 2.100  1.048  0.793  O2  TJ7 18 
TJ7 C8  C11 C 0 1 N N R N N N -7.522 -3.251 11.937 2.813  -0.434 -0.900 C8  TJ7 19 
TJ7 C9  C12 C 0 1 N N N N N N -8.823 -2.859 12.565 2.737  -1.925 -0.694 C9  TJ7 20 
TJ7 O4  O6  O 0 1 N N N N N N -9.575 -2.165 11.932 1.918  -2.389 0.063  O4  TJ7 21 
TJ7 O3  O7  O 0 1 N N N N N N -9.132 -3.269 13.803 3.579  -2.737 -1.352 O3  TJ7 22 
TJ7 C10 C13 C 0 1 Y N N N N N -7.693 -4.496 11.120 4.180  0.059  -0.501 C10 TJ7 23 
TJ7 C13 C14 C 0 1 Y N N N N N -7.162 -4.602 9.814  5.026  0.705  -1.385 C13 TJ7 24 
TJ7 C12 C15 C 0 1 Y N N N N N -7.455 -5.859 9.241  6.198  1.081  -0.870 C12 TJ7 25 
TJ7 S1  S2  S 0 1 Y N N N N N -8.349 -6.804 10.364 6.275  0.612  0.824  S1  TJ7 26 
TJ7 C11 C16 C 0 1 Y N N N N N -8.393 -5.596 11.598 4.664  -0.089 0.734  C11 TJ7 27 
TJ7 H1  H1  H 0 1 N N N N N N -3.496 -3.274 15.278 0.365  0.426  2.542  H1  TJ7 28 
TJ7 H2  H2  H 0 1 N N N N N N -6.813 -6.060 16.304 -1.279 2.422  -1.380 H2  TJ7 29 
TJ7 H3  H3  H 0 1 N N N N N N -7.117 -5.955 14.537 -0.095 3.669  -0.919 H3  TJ7 30 
TJ7 H4  H4  H 0 1 N N N N N N -5.766 -6.962 15.157 0.465  2.086  -1.511 H4  TJ7 31 
TJ7 H5  H5  H 0 1 N N N N N N -3.633 -6.353 14.747 -2.005 0.738  -1.115 H5  TJ7 32 
TJ7 H6  H6  H 0 1 N N N N N N -2.128 -8.220 13.009 -4.271 -0.810 -2.026 H6  TJ7 33 
TJ7 H7  H7  H 0 1 N N N N N N -3.123 -9.403 12.095 -4.657 -2.474 -1.527 H7  TJ7 34 
TJ7 H8  H8  H 0 1 N N N N N N -1.773 -8.545 11.279 -5.834 -1.168 -1.253 H8  TJ7 35 
TJ7 H9  H9  H 0 1 N N N N N N -4.655 -8.590 10.290 -5.856 -1.812 1.244  H9  TJ7 36 
TJ7 H10 H10 H 0 1 N N N N N N -4.920 -6.825 10.087 -4.677 -3.093 0.871  H10 TJ7 37 
TJ7 H11 H11 H 0 1 N N N N N N -3.402 -7.579 9.493  -4.307 -1.879 2.120  H11 TJ7 38 
TJ7 H12 H12 H 0 1 N N N N N N -3.506 -5.262 11.147 -4.932 0.406  1.369  H12 TJ7 39 
TJ7 H13 H13 H 0 1 N N N N N N 0.232  -6.073 10.824 -6.717 1.467  -1.528 H13 TJ7 40 
TJ7 H14 H14 H 0 1 N N N N N N -1.904 -6.047 13.462 -3.085 1.983  0.609  H14 TJ7 41 
TJ7 H16 H16 H 0 1 N N N N N N -5.730 -5.037 12.213 0.202  -0.741 -0.854 H16 TJ7 42 
TJ7 H17 H17 H 0 1 N N N N N N -7.223 -2.442 11.254 2.636  -0.202 -1.950 H17 TJ7 43 
TJ7 H18 H18 H 0 1 N N N N N N -9.985 -2.928 14.046 3.492  -3.686 -1.188 H18 TJ7 44 
TJ7 H19 H19 H 0 1 N N N N N N -6.604 -3.822 9.318  4.759  0.890  -2.415 H19 TJ7 45 
TJ7 H20 H20 H 0 1 N N N N N N -7.163 -6.177 8.251  6.979  1.595  -1.410 H20 TJ7 46 
TJ7 H21 H21 H 0 1 N N N N N N -8.875 -5.680 12.561 4.145  -0.564 1.553  H21 TJ7 47 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TJ7 C12 C13 DOUB Y N 1  
TJ7 C12 S1  SING Y N 2  
TJ7 O   C2  DOUB N N 3  
TJ7 C13 C10 SING Y N 4  
TJ7 C5  C3  SING N N 5  
TJ7 S1  C11 SING Y N 6  
TJ7 C2  O1  SING N N 7  
TJ7 C2  C1  SING N N 8  
TJ7 C10 C11 DOUB Y N 9  
TJ7 C10 C8  SING N N 10 
TJ7 C3  C1  SING N N 11 
TJ7 C3  C4  SING N N 12 
TJ7 C3  S   SING N N 13 
TJ7 C1  N   SING N N 14 
TJ7 O4  C9  DOUB N N 15 
TJ7 C8  C9  SING N N 16 
TJ7 C8  C7  SING N N 17 
TJ7 C9  O3  SING N N 18 
TJ7 S   C   SING N N 19 
TJ7 N1  C7  SING N N 20 
TJ7 N1  C6  SING N N 21 
TJ7 C7  O2  DOUB N N 22 
TJ7 N   C   SING N N 23 
TJ7 O7  C15 DOUB N N 24 
TJ7 C   C6  SING N N 25 
TJ7 C6  C15 SING N N 26 
TJ7 C6  O5  SING N N 27 
TJ7 O5  C14 SING N N 28 
TJ7 C15 H1  SING N N 29 
TJ7 C14 H2  SING N N 30 
TJ7 C14 H3  SING N N 31 
TJ7 C14 H4  SING N N 32 
TJ7 C   H5  SING N N 33 
TJ7 C4  H6  SING N N 34 
TJ7 C4  H7  SING N N 35 
TJ7 C4  H8  SING N N 36 
TJ7 C5  H9  SING N N 37 
TJ7 C5  H10 SING N N 38 
TJ7 C5  H11 SING N N 39 
TJ7 C1  H12 SING N N 40 
TJ7 O1  H13 SING N N 41 
TJ7 N   H14 SING N N 42 
TJ7 N1  H16 SING N N 43 
TJ7 C8  H17 SING N N 44 
TJ7 O3  H18 SING N N 45 
TJ7 C13 H19 SING N N 46 
TJ7 C12 H20 SING N N 47 
TJ7 C11 H21 SING N N 48 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TJ7 SMILES           ACDLabs              12.01 "O=CC(OC)(C1SC(C(N1)C(O)=O)(C)C)NC(=O)C(C(O)=O)c2cscc2"                                                                                                                        
TJ7 InChI            InChI                1.03  "InChI=1S/C16H20N2O7S2/c1-15(2)10(13(23)24)17-14(27-15)16(7-19,25-3)18-11(20)9(12(21)22)8-4-5-26-6-8/h4-7,9-10,14,17H,1-3H3,(H,18,20)(H,21,22)(H,23,24)/t9-,10+,14-,16+/m1/s1" 
TJ7 InChIKey         InChI                1.03  DGNYADVSOUQAEQ-LCFNMQHZSA-N                                                                                                                                                    
TJ7 SMILES_CANONICAL CACTVS               3.385 "CO[C@@](NC(=O)[C@H](C(O)=O)c1cscc1)(C=O)[C@@H]2N[C@@H](C(O)=O)C(C)(C)S2"                                                                                                      
TJ7 SMILES           CACTVS               3.385 "CO[C](NC(=O)[CH](C(O)=O)c1cscc1)(C=O)[CH]2N[CH](C(O)=O)C(C)(C)S2"                                                                                                             
TJ7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1([C@@H](N[C@H](S1)[C@@](C=O)(NC(=O)[C@@H](c2ccsc2)C(=O)O)OC)C(=O)O)C"                                                                                                      
TJ7 SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(C(NC(S1)C(C=O)(NC(=O)C(c2ccsc2)C(=O)O)OC)C(=O)O)C"                                                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
TJ7 "SYSTEMATIC NAME" ACDLabs              12.01 "(2R,4S)-2-[(1S)-1-{[(2R)-2-carboxy-2-(thiophen-3-yl)acetyl]amino}-1-methoxy-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid"                                          
TJ7 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R},4~{S})-2-[(1~{S})-1-methoxy-2-oxidanylidene-1-[[(2~{R})-3-oxidanyl-3-oxidanylidene-2-thiophen-3-yl-propanoyl]amino]ethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TJ7 "Create component"  2019-10-15 RCSB 
TJ7 "Modify descriptor" 2019-10-15 RCSB 
TJ7 "Initial release"   2019-10-30 RCSB 
TJ7 "Modify synonyms"   2020-06-05 PDBE 
TJ7 "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      TJ7 
_pdbx_chem_comp_synonyms.name         temocillin 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            TJ7 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C15 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
