data_SI7
# 
_chem_comp.id                                    SI7 
_chem_comp.name                                  "[N-(2-{bis[2-(pyridin-2-yl-kappaN)ethyl]amino-kappaN}ethyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamide](hydroxy)copper" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C26 H36 Cu N6 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-07-06 
_chem_comp.pdbx_modified_date                    2017-11-17 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        576.213 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SI7 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5WBD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SI7 CU1 CU1 CU 0 0 N N N 24.164 25.396 -17.726 24.164 25.396 -17.726 CU1 SI7 1  
SI7 N6  N1  N  0 1 Y N N 25.833 24.431 -17.280 25.833 24.431 -17.280 N6  SI7 2  
SI7 C23 C1  C  0 1 Y N N 26.320 23.315 -18.012 26.320 23.315 -18.012 C23 SI7 3  
SI7 C24 C2  C  0 1 Y N N 27.502 22.678 -17.633 27.502 22.678 -17.633 C24 SI7 4  
SI7 C25 C3  C  0 1 Y N N 28.234 23.123 -16.524 28.234 23.123 -16.524 C25 SI7 5  
SI7 C26 C4  C  0 1 Y N N 27.781 24.215 -15.780 27.781 24.215 -15.780 C26 SI7 6  
SI7 C22 C5  C  0 1 Y N N 26.603 24.851 -16.157 26.603 24.851 -16.157 C22 SI7 7  
SI7 C21 C6  C  0 1 N N N 26.052 26.032 -15.401 26.052 26.032 -15.401 C21 SI7 8  
SI7 C20 C7  C  0 1 N N N 24.652 25.716 -14.914 24.652 25.716 -14.914 C20 SI7 9  
SI7 N4  N2  N  0 1 N N N 23.594 25.871 -15.872 23.594 25.871 -15.872 N4  SI7 10 
SI7 N5  N3  N  0 1 Y N N 22.585 26.278 -18.528 22.585 26.278 -18.528 N5  SI7 11 
SI7 C16 C8  C  0 1 Y N N 22.135 25.747 -19.770 22.135 25.747 -19.770 C16 SI7 12 
SI7 C17 C9  C  0 1 Y N N 21.038 26.279 -20.452 21.038 26.279 -20.452 C17 SI7 13 
SI7 C18 C10 C  0 1 Y N N 20.353 27.366 -19.901 20.353 27.366 -19.901 C18 SI7 14 
SI7 C19 C11 C  0 1 Y N N 20.767 27.905 -18.680 20.767 27.905 -18.680 C19 SI7 15 
SI7 C15 C12 C  0 1 Y N N 21.862 27.377 -17.998 21.862 27.377 -17.998 C15 SI7 16 
SI7 C14 C13 C  0 1 N N N 22.293 27.991 -16.684 22.293 27.991 -16.684 C14 SI7 17 
SI7 C13 C14 C  0 1 N N N 23.055 27.186 -15.641 23.055 27.186 -15.641 C13 SI7 18 
SI7 C12 C15 C  0 1 N N N 22.575 24.889 -15.575 22.575 24.889 -15.575 C12 SI7 19 
SI7 C11 C16 C  0 1 N N N 22.113 24.796 -14.119 22.113 24.796 -14.119 C11 SI7 20 
SI7 N3  N4  N  0 1 N N N 20.799 24.319 -13.842 20.799 24.319 -13.842 N3  SI7 21 
SI7 C10 C17 C  0 1 N N N 19.627 24.894 -14.117 19.627 24.894 -14.117 C10 SI7 22 
SI7 O2  O1  O  0 1 N N N 19.615 26.129 -14.745 19.615 26.129 -14.745 O2  SI7 23 
SI7 C9  C18 C  0 1 N N N 18.319 24.343 -13.609 18.319 24.343 -13.609 C9  SI7 24 
SI7 C8  C19 C  0 1 N N N 17.433 25.387 -12.979 17.433 25.387 -12.979 C8  SI7 25 
SI7 C7  C20 C  0 1 N N N 18.044 26.046 -11.751 18.044 26.046 -11.751 C7  SI7 26 
SI7 C6  C21 C  0 1 N N N 17.266 27.202 -11.152 17.266 27.202 -11.152 C6  SI7 27 
SI7 C5  C22 C  0 1 N N S 17.904 27.775 -9.898  17.904 27.775 -9.898  C5  SI7 28 
SI7 C4  C23 C  0 1 N N S 17.324 29.128 -9.491  17.324 29.128 -9.491  C4  SI7 29 
SI7 N2  N5  N  0 1 N N N 15.898 29.214 -9.485  15.898 29.214 -9.485  N2  SI7 30 
SI7 S1  S1  S  0 1 N N N 17.761 26.783 -8.434  17.761 26.783 -8.434  S1  SI7 31 
SI7 C3  C24 C  0 1 N N N 18.438 28.147 -7.537  18.438 28.147 -7.537  C3  SI7 32 
SI7 C2  C25 C  0 1 N N R 17.639 29.351 -8.010  17.639 29.351 -8.010  C2  SI7 33 
SI7 N1  N6  N  0 1 N N N 16.382 29.548 -7.399  16.382 29.548 -7.399  N1  SI7 34 
SI7 C1  C26 C  0 1 N N N 15.291 29.407 -8.238  15.291 29.407 -8.238  C1  SI7 35 
SI7 O1  O2  O  0 1 N N N 13.971 29.429 -8.004  13.971 29.429 -8.004  O1  SI7 36 
SI7 O3  O3  O  0 1 N N N 23.222 23.161 -18.267 23.222 23.161 -18.267 O3  SI7 37 
SI7 H1  H1  H  0 1 N N N 25.770 22.956 -18.870 25.770 22.956 -18.870 H1  SI7 38 
SI7 H2  H2  H  0 1 N N N 27.857 21.831 -18.201 27.857 21.831 -18.201 H2  SI7 39 
SI7 H3  H3  H  0 1 N N N 29.149 22.621 -16.244 29.149 22.622 -16.244 H3  SI7 40 
SI7 H4  H4  H  0 1 N N N 28.339 24.561 -14.922 28.339 24.561 -14.922 H4  SI7 41 
SI7 H5  H5  H  0 1 N N N 26.699 26.249 -14.538 26.699 26.249 -14.538 H5  SI7 42 
SI7 H6  H6  H  0 1 N N N 26.020 26.909 -16.065 26.020 26.909 -16.065 H6  SI7 43 
SI7 H7  H7  H  0 1 N N N 24.435 26.381 -14.065 24.435 26.381 -14.065 H7  SI7 44 
SI7 H8  H8  H  0 1 N N N 24.644 24.670 -14.573 24.644 24.670 -14.573 H8  SI7 45 
SI7 H9  H9  H  0 1 N N N 22.659 24.906 -20.199 22.659 24.906 -20.199 H9  SI7 46 
SI7 H10 H10 H  0 1 N N N 20.723 25.855 -21.394 20.723 25.855 -21.394 H10 SI7 47 
SI7 H11 H11 H  0 1 N N N 19.505 27.789 -20.419 19.505 27.789 -20.419 H11 SI7 48 
SI7 H12 H12 H  0 1 N N N 20.231 28.743 -18.259 20.231 28.743 -18.259 H12 SI7 49 
SI7 H13 H13 H  0 1 N N N 22.930 28.851 -16.938 22.930 28.851 -16.938 H13 SI7 50 
SI7 H14 H14 H  0 1 N N N 23.911 27.812 -15.349 23.911 27.812 -15.349 H14 SI7 51 
SI7 H15 H15 H  0 1 N N N 21.694 25.127 -16.190 21.694 25.126 -16.190 H15 SI7 52 
SI7 H16 H16 H  0 1 N N N 22.968 23.903 -15.863 22.968 23.903 -15.863 H16 SI7 53 
SI7 H17 H17 H  0 1 N N N 22.815 24.127 -13.600 22.815 24.127 -13.600 H17 SI7 54 
SI7 H18 H18 H  0 1 N N N 22.186 25.807 -13.692 22.186 25.807 -13.692 H18 SI7 55 
SI7 H19 H19 H  0 1 N N N 20.749 23.434 -13.379 20.749 23.434 -13.379 H19 SI7 56 
SI7 H20 H20 H  0 1 N N N 17.779 23.892 -14.454 17.779 23.892 -14.455 H20 SI7 57 
SI7 H21 H21 H  0 1 N N N 18.535 23.570 -12.857 18.535 23.570 -12.857 H21 SI7 58 
SI7 H22 H22 H  0 1 N N N 17.229 26.167 -13.727 17.229 26.167 -13.727 H22 SI7 59 
SI7 H23 H23 H  0 1 N N N 16.488 24.908 -12.682 16.488 24.908 -12.682 H23 SI7 60 
SI7 H24 H24 H  0 1 N N N 18.149 25.275 -10.974 18.149 25.274 -10.974 H24 SI7 61 
SI7 H25 H25 H  0 1 N N N 19.039 26.422 -12.032 19.039 26.421 -12.032 H25 SI7 62 
SI7 H26 H26 H  0 1 N N N 17.196 28.002 -11.904 17.196 28.002 -11.904 H26 SI7 63 
SI7 H27 H27 H  0 1 N N N 16.256 26.848 -10.898 16.256 26.848 -10.898 H27 SI7 64 
SI7 H28 H28 H  0 1 N N N 18.983 27.896 -10.076 18.983 27.896 -10.076 H28 SI7 65 
SI7 H29 H29 H  0 1 N N N 17.774 29.929 -10.096 17.774 29.929 -10.096 H29 SI7 66 
SI7 H30 H30 H  0 1 N N N 15.362 29.140 -10.326 15.362 29.140 -10.326 H30 SI7 67 
SI7 H31 H31 H  0 1 N N N 18.314 28.000 -6.454  18.314 28.000 -6.454  H31 SI7 68 
SI7 H32 H32 H  0 1 N N N 19.506 28.274 -7.770  19.506 28.274 -7.770  H32 SI7 69 
SI7 H33 H33 H  0 1 N N N 18.260 30.253 -7.911  18.260 30.253 -7.911  H33 SI7 70 
SI7 H34 H34 H  0 1 N N N 16.287 29.773 -6.429  16.287 29.773 -6.429  H34 SI7 71 
SI7 H36 H36 H  0 1 N N N 21.376 28.346 -16.192 21.376 28.346 -16.192 H36 SI7 72 
SI7 H37 H37 H  0 1 N N N 22.370 27.081 -14.787 22.370 27.081 -14.787 H37 SI7 73 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SI7 C17 C18 DOUB Y N 1  
SI7 C17 C16 SING Y N 2  
SI7 C18 C19 SING Y N 3  
SI7 C16 N5  DOUB Y N 4  
SI7 C19 C15 DOUB Y N 5  
SI7 N5  C15 SING Y N 6  
SI7 N5  CU1 SING N N 7  
SI7 C23 C24 DOUB Y N 8  
SI7 C23 N6  SING Y N 9  
SI7 C15 C14 SING N N 10 
SI7 CU1 N6  SING N N 11 
SI7 CU1 N4  SING N N 12 
SI7 C24 C25 SING Y N 13 
SI7 N6  C22 DOUB Y N 14 
SI7 C14 C13 SING N N 15 
SI7 C25 C26 DOUB Y N 16 
SI7 C22 C26 SING Y N 17 
SI7 C22 C21 SING N N 18 
SI7 N4  C13 SING N N 19 
SI7 N4  C12 SING N N 20 
SI7 N4  C20 SING N N 21 
SI7 C12 C11 SING N N 22 
SI7 C21 C20 SING N N 23 
SI7 O2  C10 DOUB N N 24 
SI7 C11 N3  SING N N 25 
SI7 C10 N3  SING N N 26 
SI7 C10 C9  SING N N 27 
SI7 C9  C8  SING N N 28 
SI7 C8  C7  SING N N 29 
SI7 C7  C6  SING N N 30 
SI7 C6  C5  SING N N 31 
SI7 C5  C4  SING N N 32 
SI7 C5  S1  SING N N 33 
SI7 C4  N2  SING N N 34 
SI7 C4  C2  SING N N 35 
SI7 N2  C1  SING N N 36 
SI7 S1  C3  SING N N 37 
SI7 C1  O1  DOUB N N 38 
SI7 C1  N1  SING N N 39 
SI7 C2  C3  SING N N 40 
SI7 C2  N1  SING N N 41 
SI7 CU1 O3  SING N N 42 
SI7 C23 H1  SING N N 43 
SI7 C24 H2  SING N N 44 
SI7 C25 H3  SING N N 45 
SI7 C26 H4  SING N N 46 
SI7 C21 H5  SING N N 47 
SI7 C21 H6  SING N N 48 
SI7 C20 H7  SING N N 49 
SI7 C20 H8  SING N N 50 
SI7 C16 H9  SING N N 51 
SI7 C17 H10 SING N N 52 
SI7 C18 H11 SING N N 53 
SI7 C19 H12 SING N N 54 
SI7 C14 H13 SING N N 55 
SI7 C13 H14 SING N N 56 
SI7 C12 H15 SING N N 57 
SI7 C12 H16 SING N N 58 
SI7 C11 H17 SING N N 59 
SI7 C11 H18 SING N N 60 
SI7 N3  H19 SING N N 61 
SI7 C9  H20 SING N N 62 
SI7 C9  H21 SING N N 63 
SI7 C8  H22 SING N N 64 
SI7 C8  H23 SING N N 65 
SI7 C7  H24 SING N N 66 
SI7 C7  H25 SING N N 67 
SI7 C6  H26 SING N N 68 
SI7 C6  H27 SING N N 69 
SI7 C5  H28 SING N N 70 
SI7 C4  H29 SING N N 71 
SI7 N2  H30 SING N N 72 
SI7 C3  H31 SING N N 73 
SI7 C3  H32 SING N N 74 
SI7 C2  H33 SING N N 75 
SI7 N1  H34 SING N N 76 
SI7 C14 H36 SING N N 77 
SI7 C13 H37 SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SI7 SMILES           ACDLabs              12.01 "[Cu]23(n1c(cccc1)CCN2(CCc4n3cccc4)CCNC(CCCCC6C5NC(NC5CS6)=O)=O)O" 
SI7 InChI            InChI                1.03  
"InChI=1S/C26H36N6O2S.Cu.H2O/c33-24(10-2-1-9-23-25-22(19-35-23)30-26(34)31-25)29-15-18-32(16-11-20-7-3-5-13-27-20)17-12-21-8-4-6-14-28-21;;/h3-8,13-14,22-23,25H,1-2,9-12,15-19H2,(H,29,33)(H2,30,31,34);;1H2/q;+1;/p-1/t22-,23-,25-;;/m0../s1" 
SI7 InChIKey         InChI                1.03  VJQJBNZBGSOUKA-HRKQCRCBSA-M 
SI7 SMILES_CANONICAL CACTVS               3.385 "O.[Cu].O=C(CCCC[C@@H]1SC[C@@H]2NC(=O)N[C@H]12)NCCN(CCc3ccccn3)CCc4ccccn4" 
SI7 SMILES           CACTVS               3.385 "O.[Cu].O=C(CCCC[CH]1SC[CH]2NC(=O)N[CH]12)NCCN(CCc3ccccn3)CCc4ccccn4" 
SI7 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2([N]4=C1C=CC=C4)[O])CCNC(=O)CCCC[C@H]5[C@@H]6[C@H](CS5)NC(=O)N6" 
SI7 SMILES           "OpenEye OEToolkits" 2.0.6 "C1C[N]2(CCC3=CC=CC=[N]3[Cu]2([N]4=C1C=CC=C4)[O])CCNC(=O)CCCCC5C6C(CS5)NC(=O)N6" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SI7 "SYSTEMATIC NAME" ACDLabs 12.01 "[N-(2-{bis[2-(pyridin-2-yl-kappaN)ethyl]amino-kappaN}ethyl)-5-(2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)pentanamide](hydroxy)copper" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SI7 "Create component" 2017-07-06 RCSB 
SI7 "Initial release"  2017-11-22 RCSB 
# 
