data_PT7
#

_chem_comp.id                                   PT7
_chem_comp.name                                 "chloro[2-(pyridin-2-yl-kappaN)phenyl-kappaC~1~](triphenyl-lambda~5~-phosphanyl)platinum(2+)"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C29 H23 Cl N P Pt"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "PtII(2-phenylpyridine)(tri-phenylphosphine)Cl"
_chem_comp.pdbx_formal_charge                   2
_chem_comp.pdbx_initial_date                    2018-07-18
_chem_comp.pdbx_modified_date                   2021-03-01
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       647.004
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    PT7
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  Y
_chem_comp.pdbx_model_coordinates_db_code       6E2B
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PT7  PT20  PT1  PT  2  0  N  N  N  48.217  24.126   3.655  ?  ?  ?  PT20  PT7   1  
PT7  P1    P1   P   0  1  N  N  N  47.202  23.342   1.750  ?  ?  ?  P1    PT7   2  
PT7  C8    C1   C   0  1  Y  N  N  48.000  21.902   1.044  ?  ?  ?  C8    PT7   3  
PT7  C13   C2   C   0  1  Y  N  N  47.946  21.717  -0.343  ?  ?  ?  C13   PT7   4  
PT7  C12   C3   C   0  1  Y  N  N  48.638  20.622  -0.814  ?  ?  ?  C12   PT7   5  
PT7  C11   C4   C   0  1  Y  N  N  49.337  19.751   0.011  ?  ?  ?  C11   PT7   6  
PT7  C10   C5   C   0  1  Y  N  N  49.392  19.964   1.403  ?  ?  ?  C10   PT7   7  
PT7  C9    C6   C   0  1  Y  N  N  48.710  21.056   1.905  ?  ?  ?  C9    PT7   8  
PT7  C25   C7   C   0  1  Y  N  N  45.522  22.879   2.058  ?  ?  ?  C25   PT7   9  
PT7  C26   C8   C   0  1  Y  N  N  45.101  21.540   2.344  ?  ?  ?  C26   PT7  10  
PT7  C27   C9   C   0  1  Y  N  N  43.787  21.265   2.639  ?  ?  ?  C27   PT7  11  
PT7  C28   C10  C   0  1  Y  N  N  42.807  22.188   2.788  ?  ?  ?  C28   PT7  12  
PT7  C29   C11  C   0  1  Y  N  N  43.176  23.461   2.490  ?  ?  ?  C29   PT7  13  
PT7  C30   C12  C   0  1  Y  N  N  44.473  23.803   2.158  ?  ?  ?  C30   PT7  14  
PT7  C19   C13  C   0  1  Y  N  N  46.960  24.670   0.512  ?  ?  ?  C19   PT7  15  
PT7  C20   C14  C   0  1  Y  N  N  47.652  25.898   0.646  ?  ?  ?  C20   PT7  16  
PT7  C21   C15  C   0  1  Y  N  N  47.511  26.927  -0.230  ?  ?  ?  C21   PT7  17  
PT7  C22   C16  C   0  1  Y  N  N  46.661  26.731  -1.334  ?  ?  ?  C22   PT7  18  
PT7  C23   C17  C   0  1  Y  N  N  45.953  25.567  -1.471  ?  ?  ?  C23   PT7  19  
PT7  C24   C18  C   0  1  Y  N  N  46.140  24.469  -0.623  ?  ?  ?  C24   PT7  20  
PT7  N19   N1   N   0  1  Y  N  N  49.383  24.978   5.348  ?  ?  ?  N19   PT7  21  
PT7  C14   C19  C   0  1  Y  N  N  50.670  25.290   5.109  ?  ?  ?  C14   PT7  22  
PT7  C15   C20  C   0  1  Y  N  N  51.311  25.922   6.126  ?  ?  ?  C15   PT7  23  
PT7  C16   C21  C   0  1  Y  N  N  50.641  26.232   7.319  ?  ?  ?  C16   PT7  24  
PT7  C17   C22  C   0  1  Y  N  N  49.340  25.880   7.488  ?  ?  ?  C17   PT7  25  
PT7  C18   C23  C   0  1  Y  N  N  48.685  25.230   6.485  ?  ?  ?  C18   PT7  26  
PT7  C2    C24  C   0  1  Y  N  N  51.080  24.888   3.747  ?  ?  ?  C2    PT7  27  
PT7  C7    C25  C   0  1  Y  N  N  52.426  25.179   3.451  ?  ?  ?  C7    PT7  28  
PT7  C6    C26  C   0  1  Y  N  N  52.895  24.771   2.199  ?  ?  ?  C6    PT7  29  
PT7  C5    C27  C   0  1  Y  N  N  52.077  24.197   1.296  ?  ?  ?  C5    PT7  30  
PT7  C4    C28  C   0  1  Y  N  N  50.741  23.977   1.548  ?  ?  ?  C4    PT7  31  
PT7  C3    C29  C   0  1  Y  N  N  50.237  24.165   2.797  ?  ?  ?  C3    PT7  32  
PT7  H1    H1   H   0  1  N  N  N  47.402  22.384  -0.996  ?  ?  ?  H1    PT7  33  
PT7  H2    H2   H   0  1  N  N  N  48.636  20.432  -1.877  ?  ?  ?  H2    PT7  34  
PT7  H3    H3   H   0  1  N  N  N  49.845  18.900  -0.419  ?  ?  ?  H3    PT7  35  
PT7  H4    H4   H   0  1  N  N  N  49.945  19.300   2.051  ?  ?  ?  H4    PT7  36  
PT7  H5    H5   H   0  1  N  N  N  48.725  21.258   2.966  ?  ?  ?  H5    PT7  37  
PT7  H6    H6   H   0  1  N  N  N  45.824  20.738   2.328  ?  ?  ?  H6    PT7  38  
PT7  H7    H7   H   0  1  N  N  N  43.513  20.228   2.762  ?  ?  ?  H7    PT7  39  
PT7  H8    H8   H   0  1  N  N  N  41.811  21.932   3.118  ?  ?  ?  H8    PT7  40  
PT7  H9    H9   H   0  1  N  N  N  42.425  24.237   2.514  ?  ?  ?  H9    PT7  41  
PT7  H10   H10  H   0  1  N  N  N  44.691  24.843   1.964  ?  ?  ?  H10   PT7  42  
PT7  H11   H11  H   0  1  N  N  N  48.323  26.022   1.483  ?  ?  ?  H11   PT7  43  
PT7  H12   H12  H   0  1  N  N  N  48.032  27.861  -0.084  ?  ?  ?  H12   PT7  44  
PT7  H13   H13  H   0  1  N  N  N  46.566  27.506  -2.080  ?  ?  ?  H13   PT7  45  
PT7  H14   H14  H   0  1  N  N  N  45.223  25.493  -2.263  ?  ?  ?  H14   PT7  46  
PT7  H15   H15  H   0  1  N  N  N  45.680  23.513  -0.826  ?  ?  ?  H15   PT7  47  
PT7  H16   H16  H   0  1  N  N  N  52.351  26.190   6.015  ?  ?  ?  H16   PT7  48  
PT7  H17   H17  H   0  1  N  N  N  51.163  26.754   8.108  ?  ?  ?  H17   PT7  49  
PT7  H18   H18  H   0  1  N  N  N  48.829  26.113   8.410  ?  ?  ?  H18   PT7  50  
PT7  H19   H19  H   0  1  N  N  N  47.653  24.928   6.590  ?  ?  ?  H19   PT7  51  
PT7  H20   H20  H   0  1  N  N  N  53.064  25.692   4.156  ?  ?  ?  H20   PT7  52  
PT7  H21   H21  H   0  1  N  N  N  53.936  24.919   1.950  ?  ?  ?  H21   PT7  53  
PT7  H22   H22  H   0  1  N  N  N  52.483  23.899   0.341  ?  ?  ?  H22   PT7  54  
PT7  H23   H23  H   0  1  N  N  N  50.090  23.653   0.749  ?  ?  ?  H23   PT7  55  
PT7  CL1   CL1  CL  0  0  N  Y  N       ?       ?       ?  ?  ?  ?  CL1   PT7  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PT7  C23   C22   DOUB  Y  N   1  
PT7  C23   C24   SING  Y  N   2  
PT7  C22   C21   SING  Y  N   3  
PT7  C12   C13   DOUB  Y  N   4  
PT7  C12   C11   SING  Y  N   5  
PT7  C24   C19   DOUB  Y  N   6  
PT7  C13   C8    SING  Y  N   7  
PT7  C21   C20   DOUB  Y  N   8  
PT7  C11   C10   DOUB  Y  N   9  
PT7  C19   C20   SING  Y  N  10  
PT7  C19   P1    SING  N  N  11  
PT7  C8    P1    SING  N  N  12  
PT7  C8    C9    DOUB  Y  N  13  
PT7  C5    C4    SING  Y  N  14  
PT7  C5    C6    DOUB  Y  N  15  
PT7  C10   C9    SING  Y  N  16  
PT7  C4    C3    DOUB  Y  N  17  
PT7  P1    C25   SING  N  N  18  
PT7  P1    PT20  SING  N  N  19  
PT7  C25   C30   DOUB  Y  N  20  
PT7  C25   C26   SING  Y  N  21  
PT7  C30   C29   SING  Y  N  22  
PT7  C6    C7    SING  Y  N  23  
PT7  C26   C27   DOUB  Y  N  24  
PT7  C29   C28   DOUB  Y  N  25  
PT7  C27   C28   SING  Y  N  26  
PT7  C3    PT20  SING  N  N  27  
PT7  C3    C2    SING  Y  N  28  
PT7  C7    C2    DOUB  Y  N  29  
PT7  PT20  N19   SING  N  N  30  
PT7  C2    C14   SING  N  N  31  
PT7  C14   N19   SING  Y  N  32  
PT7  C14   C15   DOUB  Y  N  33  
PT7  N19   C18   DOUB  Y  N  34  
PT7  C15   C16   SING  Y  N  35  
PT7  C18   C17   SING  Y  N  36  
PT7  C16   C17   DOUB  Y  N  37  
PT7  C13   H1    SING  N  N  38  
PT7  C12   H2    SING  N  N  39  
PT7  C11   H3    SING  N  N  40  
PT7  C10   H4    SING  N  N  41  
PT7  C9    H5    SING  N  N  42  
PT7  C26   H6    SING  N  N  43  
PT7  C27   H7    SING  N  N  44  
PT7  C28   H8    SING  N  N  45  
PT7  C29   H9    SING  N  N  46  
PT7  C30   H10   SING  N  N  47  
PT7  C20   H11   SING  N  N  48  
PT7  C21   H12   SING  N  N  49  
PT7  C22   H13   SING  N  N  50  
PT7  C23   H14   SING  N  N  51  
PT7  C24   H15   SING  N  N  52  
PT7  C15   H16   SING  N  N  53  
PT7  C16   H17   SING  N  N  54  
PT7  C17   H18   SING  N  N  55  
PT7  C18   H19   SING  N  N  56  
PT7  C7    H20   SING  N  N  57  
PT7  C6    H21   SING  N  N  58  
PT7  C5    H22   SING  N  N  59  
PT7  C4    H23   SING  N  N  60  
PT7  PT20  CL1   SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PT7  SMILES            ACDLabs               12.01  "[Pt+2]2(n1ccccc1c3ccccc23)(Cl)P(c4ccccc4)(c5ccccc5)c6ccccc6"  
PT7  InChI             InChI                 1.03   "InChI=1S/C18H15P.C11H8N.ClH.Pt/c1-4-10-16(11-5-1)19(17-12-6-2-7-13-17)18-14-8-3-9-15-18;1-2-6-10(7-3-1)11-8-4-5-9-12-11;;/h1-15H;1-6,8-9H;1H;/q;;;+2"  
PT7  InChIKey          InChI                 1.03   KHJLZDWNJSEPIZ-UHFFFAOYSA-N  
PT7  SMILES_CANONICAL  CACTVS                3.385  "Cl[Pt++]c1ccccc1c2ccccn2.c3ccc(cc3)P(c4ccccc4)c5ccccc5"  
PT7  SMILES            CACTVS                3.385  "Cl[Pt++]c1ccccc1c2ccccn2.c3ccc(cc3)P(c4ccccc4)c5ccccc5"  
PT7  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "c1ccc(cc1)[P](c2ccccc2)(c3ccccc3)[Pt+2]4(c5ccccc5C6=CC=CC=[N]64)Cl"  
PT7  SMILES            "OpenEye OEToolkits"  2.0.6  "c1ccc(cc1)[P](c2ccccc2)(c3ccccc3)[Pt+2]4(c5ccccc5C6=CC=CC=[N]64)Cl"  
#
_pdbx_chem_comp_identifier.comp_id          PT7
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          ACDLabs
_pdbx_chem_comp_identifier.program_version  12.01
_pdbx_chem_comp_identifier.identifier       "chloro[2-(pyridin-2-yl-kappaN)phenyl-kappaC~1~](triphenyl-lambda~5~-phosphanyl)platinum(2+)"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PT7  "Create component"  2018-07-18  RCSB  
PT7  "Initial release"   2018-11-14  RCSB  
PT7  "Modify synonyms"   2021-03-01  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     PT7
_pdbx_chem_comp_synonyms.name        "PtII(2-phenylpyridine)(tri-phenylphosphine)Cl"
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
