data_N47
#

_chem_comp.id                                   N47
_chem_comp.name                                 "N~2~-{4-methoxy-3-[3-(pyrrolidin-1-yl)propoxy]phenyl}-N~4~,6-dimethylpyrimidine-2,4-diamine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C20 H29 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-05-02
_chem_comp.pdbx_modified_date                   2020-11-06
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       371.477
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    N47
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6ORX
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
N47  N    N1   N  0  1  N  N  N   7.196  18.424  26.554   0.363  -2.540  -1.513  N    N47   1  
N47  O1   O1   O  0  1  N  N  N   4.517  11.331  29.546   0.697   4.600  -0.470  O1   N47   2  
N47  C    C1   C  0  1  N  N  N   5.894  18.003  27.079  -0.169  -3.847  -1.908  C    N47   3  
N47  C12  C2   C  0  1  N  N  N   6.021   6.363  26.940  -5.533  -1.216   1.303  C12  N47   4  
N47  C11  C3   C  0  1  N  N  N   6.638   5.495  25.861  -6.484  -1.761   0.216  C11  N47   5  
N47  C10  C4   C  0  1  N  N  N   8.057   5.597  26.020  -6.727  -0.524  -0.688  C10  N47   6  
N47  C9   C5   C  0  1  N  N  N   8.293   6.169  27.313  -5.344   0.174  -0.641  C9   N47   7  
N47  N3   N2   N  0  1  N  N  N   7.113   7.085  27.527  -4.867  -0.026   0.744  N3   N47   8  
N47  C8   C6   C  0  1  N  N  N   6.881   7.378  28.952  -3.406  -0.173   0.781  C8   N47   9  
N47  C7   C7   C  0  1  N  N  N   7.986   8.172  29.648  -2.750   1.163   0.431  C7   N47  10  
N47  C6   C8   C  0  1  N  N  N   8.184   9.582  29.065  -1.228   1.010   0.470  C6   N47  11  
N47  O    O2   O  0  1  N  N  N   6.926  10.262  29.214  -0.614   2.258   0.144  O    N47  12  
N47  C5   C9   C  0  1  Y  N  N   6.819  11.595  28.979   0.745   2.294   0.133  C5   N47  13  
N47  C4   C10  C  0  1  Y  N  N   7.904  12.388  28.611   1.471   1.151   0.425  C4   N47  14  
N47  C13  C11  C  0  1  Y  N  N   5.555  12.189  29.206   1.409   3.478  -0.177  C13  N47  15  
N47  C14  C12  C  0  1  N  N  N   3.214  11.862  29.770   1.443   5.779  -0.779  C14  N47  16  
N47  C15  C13  C  0  1  Y  N  N   5.420  13.541  28.945   2.793   3.513  -0.187  C15  N47  17  
N47  C16  C14  C  0  1  Y  N  N   6.510  14.321  28.539   3.518   2.374   0.110  C16  N47  18  
N47  C3   C15  C  0  1  Y  N  N   7.760  13.732  28.350   2.859   1.189   0.409  C3   N47  19  
N47  N2   N3   N  0  1  N  N  N   8.903  14.343  28.006   3.594   0.036   0.710  N2   N47  20  
N47  C2   C16  C  0  1  Y  N  N   9.052  15.566  27.508   3.111  -1.209   0.344  C2   N47  21  
N47  N1   N4   N  0  1  Y  N  N   8.038  16.370  27.280   2.008  -1.284  -0.386  N1   N47  22  
N47  N4   N5   N  0  1  Y  N  N  10.338  15.992  27.264   3.766  -2.295   0.728  N4   N47  23  
N47  C17  C17  C  0  1  Y  N  N  10.562  17.234  26.804   3.335  -3.503   0.397  C17  N47  24  
N47  C18  C18  C  0  1  N  N  N  11.863  17.634  26.524   4.090  -4.729   0.841  C18  N47  25  
N47  C19  C19  C  0  1  Y  N  N   9.511  18.090  26.494   2.186  -3.627  -0.359  C19  N47  26  
N47  C1   C20  C  0  1  Y  N  N   8.248  17.631  26.788   1.519  -2.464  -0.754  C1   N47  27  
N47  H1   H1   H  0  1  N  N  N   7.403  19.319  26.950  -0.092  -1.729  -1.787  H1   N47  28  
N47  H2   H2   H  0  1  N  N  N   5.131  18.749  26.810   0.573  -4.376  -2.505  H2   N47  29  
N47  H3   H3   H  0  1  N  N  N   5.622  17.029  26.647  -0.401  -4.429  -1.016  H3   N47  30  
N47  H4   H4   H  0  1  N  N  N   5.951  17.916  28.174  -1.076  -3.707  -2.496  H4   N47  31  
N47  H5   H5   H  0  1  N  N  N   5.292   7.060  26.502  -6.104  -0.940   2.190  H5   N47  32  
N47  H6   H6   H  0  1  N  N  N   5.523   5.739  27.696  -4.790  -1.971   1.560  H6   N47  33  
N47  H7   H7   H  0  1  N  N  N   6.340   5.857  24.866  -6.006  -2.562  -0.348  H7   N47  34  
N47  H8   H8   H  0  1  N  N  N   6.316   4.450  25.983  -7.419  -2.104   0.659  H8   N47  35  
N47  H9   H9   H  0  1  N  N  N   8.517   4.600  25.958  -6.977  -0.826  -1.705  H9   N47  36  
N47  H10  H10  H  0  1  N  N  N   8.479   6.245  25.237  -7.502   0.119  -0.271  H10  N47  37  
N47  H11  H11  H  0  1  N  N  N   8.327   5.387  28.086  -4.660  -0.293  -1.349  H11  N47  38  
N47  H12  H12  H  0  1  N  N  N   9.235   6.736  27.324  -5.448   1.237  -0.857  H12  N47  39  
N47  H14  H14  H  0  1  N  N  N   5.947   7.954  29.032  -3.098  -0.479   1.781  H14  N47  40  
N47  H15  H15  H  0  1  N  N  N   6.767   6.420  29.481  -3.099  -0.929   0.059  H15  N47  41  
N47  H16  H16  H  0  1  N  N  N   7.729   8.268  30.713  -3.058   1.469  -0.568  H16  N47  42  
N47  H17  H17  H  0  1  N  N  N   8.930   7.617  29.547  -3.057   1.919   1.154  H17  N47  43  
N47  H18  H18  H  0  1  N  N  N   8.459   9.519  28.002  -0.919   0.704   1.470  H18  N47  44  
N47  H19  H19  H  0  1  N  N  N   8.972  10.115  29.617  -0.920   0.254  -0.252  H19  N47  45  
N47  H20  H20  H  0  1  N  N  N   8.882  11.937  28.528   0.958   0.232   0.666  H20  N47  46  
N47  H21  H21  H  0  1  N  N  N   2.524  11.045  30.027   2.070   5.594  -1.651  H21  N47  47  
N47  H22  H22  H  0  1  N  N  N   3.250  12.585  30.598   0.756   6.598  -0.993  H22  N47  48  
N47  H23  H23  H  0  1  N  N  N   2.862  12.366  28.858   2.071   6.044   0.071  H23  N47  49  
N47  H24  H24  H  0  1  N  N  N   4.452  14.006  29.057   3.307   4.432  -0.428  H24  N47  50  
N47  H25  H25  H  0  1  N  N  N   6.382  15.380  28.372   4.597   2.404   0.102  H25  N47  51  
N47  H26  H26  H  0  1  N  N  N   9.742  13.816  28.140   4.442   0.110   1.175  H26  N47  52  
N47  H27  H27  H  0  1  N  N  N  12.556  16.807  26.740   3.710  -5.060   1.808  H27  N47  53  
N47  H28  H28  H  0  1  N  N  N  11.941  17.910  25.462   3.956  -5.524   0.108  H28  N47  54  
N47  H29  H29  H  0  1  N  N  N  12.122  18.502  27.148   5.150  -4.491   0.930  H29  N47  55  
N47  H30  H30  H  0  1  N  N  N   9.677  19.060  26.048   1.813  -4.600  -0.642  H30  N47  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
N47  C11  C10  SING  N  N   1  
N47  C11  C12  SING  N  N   2  
N47  C10  C9   SING  N  N   3  
N47  C19  C1   DOUB  Y  N   4  
N47  C19  C17  SING  Y  N   5  
N47  C18  C17  SING  N  N   6  
N47  N    C1   SING  N  N   7  
N47  N    C    SING  N  N   8  
N47  C1   N1   SING  Y  N   9  
N47  C17  N4   DOUB  Y  N  10  
N47  C12  N3   SING  N  N  11  
N47  N4   C2   SING  Y  N  12  
N47  N1   C2   DOUB  Y  N  13  
N47  C9   N3   SING  N  N  14  
N47  C2   N2   SING  N  N  15  
N47  N3   C8   SING  N  N  16  
N47  N2   C3   SING  N  N  17  
N47  C3   C16  DOUB  Y  N  18  
N47  C3   C4   SING  Y  N  19  
N47  C16  C15  SING  Y  N  20  
N47  C4   C5   DOUB  Y  N  21  
N47  C15  C13  DOUB  Y  N  22  
N47  C8   C7   SING  N  N  23  
N47  C5   C13  SING  Y  N  24  
N47  C5   O    SING  N  N  25  
N47  C6   O    SING  N  N  26  
N47  C6   C7   SING  N  N  27  
N47  C13  O1   SING  N  N  28  
N47  O1   C14  SING  N  N  29  
N47  N    H1   SING  N  N  30  
N47  C    H2   SING  N  N  31  
N47  C    H3   SING  N  N  32  
N47  C    H4   SING  N  N  33  
N47  C12  H5   SING  N  N  34  
N47  C12  H6   SING  N  N  35  
N47  C11  H7   SING  N  N  36  
N47  C11  H8   SING  N  N  37  
N47  C10  H9   SING  N  N  38  
N47  C10  H10  SING  N  N  39  
N47  C9   H11  SING  N  N  40  
N47  C9   H12  SING  N  N  41  
N47  C8   H14  SING  N  N  42  
N47  C8   H15  SING  N  N  43  
N47  C7   H16  SING  N  N  44  
N47  C7   H17  SING  N  N  45  
N47  C6   H18  SING  N  N  46  
N47  C6   H19  SING  N  N  47  
N47  C4   H20  SING  N  N  48  
N47  C14  H21  SING  N  N  49  
N47  C14  H22  SING  N  N  50  
N47  C14  H23  SING  N  N  51  
N47  C15  H24  SING  N  N  52  
N47  C16  H25  SING  N  N  53  
N47  N2   H26  SING  N  N  54  
N47  C18  H27  SING  N  N  55  
N47  C18  H28  SING  N  N  56  
N47  C18  H29  SING  N  N  57  
N47  C19  H30  SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
N47  SMILES            ACDLabs               12.01  "N(c3nc(Nc2cc(OCCCN1CCCC1)c(OC)cc2)nc(C)c3)C"  
N47  InChI             InChI                 1.03   "InChI=1S/C20H29N5O2/c1-15-13-19(21-2)24-20(22-15)23-16-7-8-17(26-3)18(14-16)27-12-6-11-25-9-4-5-10-25/h7-8,13-14H,4-6,9-12H2,1-3H3,(H2,21,22,23,24)"  
N47  InChIKey          InChI                 1.03   HWEQZXCORSHBDW-UHFFFAOYSA-N  
N47  SMILES_CANONICAL  CACTVS                3.385  "CNc1cc(C)nc(Nc2ccc(OC)c(OCCCN3CCCC3)c2)n1"  
N47  SMILES            CACTVS                3.385  "CNc1cc(C)nc(Nc2ccc(OC)c(OCCCN3CCCC3)c2)n1"  
N47  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1cc(nc(n1)Nc2ccc(c(c2)OCCCN3CCCC3)OC)NC"  
N47  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1cc(nc(n1)Nc2ccc(c(c2)OCCCN3CCCC3)OC)NC"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
N47  "SYSTEMATIC NAME"  ACDLabs               12.01  "N~2~-{4-methoxy-3-[3-(pyrrolidin-1-yl)propoxy]phenyl}-N~4~,6-dimethylpyrimidine-2,4-diamine"  
N47  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}2-[4-methoxy-3-(3-pyrrolidin-1-ylpropoxy)phenyl]-~{N}4,6-dimethyl-pyrimidine-2,4-diamine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
N47  "Create component"  2019-05-02  RCSB  
N47  "Initial release"   2020-11-11  RCSB  
##
